Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2397
         (476 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015994-1|AAV36879.1|  323|Drosophila melanogaster RE52333p pro...    29   3.3  
AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA...    29   3.3  
AF239608-1|AAF63500.1| 1551|Drosophila melanogaster SP1070 protein.    27   9.9  
AE014134-1211|AAF52472.1| 3396|Drosophila melanogaster CG9138-PA...    27   9.9  

>BT015994-1|AAV36879.1|  323|Drosophila melanogaster RE52333p
           protein.
          Length = 323

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 17/59 (28%), Positives = 27/59 (45%)
 Frame = -3

Query: 405 ISRISCWLILFMSCPISGSRTPPQTHPEYQHQKPTHFAGCSRYTIYITGFQKIDAPCTI 229
           I  +  WL+LF+ C + G   PP  + E  + +P +F   SR  +  T  Q     C +
Sbjct: 13  ICLVPLWLLLFLDCGMVGGEVPPH-YWETPYSQP-YFDNSSRREVTATVGQAALLHCRV 69


>AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA
            protein.
          Length = 1958

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = -3

Query: 423  RSITSDISRISCWLILFMSCPISGSRTPPQTHPEYQHQKPTHFAGCSRYT 274
            R +  D++  +CW    +      +  PP+T P+ QH +P      S  T
Sbjct: 1400 RVLMRDLNGKACWDASILYSEPRNAEEPPKTTPKIQHSQPLDSMATSMVT 1449


>AF239608-1|AAF63500.1| 1551|Drosophila melanogaster SP1070 protein.
          Length = 1551

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +1

Query: 217 KPDINSAWCIDLLEASNVNSVTGTAGKMCRFLV 315
           +P  N   C+DL++  + N   G  GK C+  +
Sbjct: 254 RPCANEGTCVDLVDGYSCNCEPGYTGKNCQHTI 286


>AE014134-1211|AAF52472.1| 3396|Drosophila melanogaster CG9138-PA
            protein.
          Length = 3396

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +1

Query: 217  KPDINSAWCIDLLEASNVNSVTGTAGKMCRFLV 315
            +P  N   C+DL++  + N   G  GK C+  +
Sbjct: 2095 RPCANEGTCVDLVDGYSCNCEPGYTGKNCQHTI 2127


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,361,162
Number of Sequences: 53049
Number of extensions: 509178
Number of successful extensions: 1732
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1732
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1643002263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)