Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2396
         (510 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4N2E4 Cluster: Putative uncharacterized protein; n=1; ...    33   3.8  
UniRef50_Q9UYG6 Cluster: DppA-3 dipeptide transport protein; n=4...    32   6.6  
UniRef50_A5E342 Cluster: Putative uncharacterized protein; n=1; ...    32   8.7  

>UniRef50_Q4N2E4 Cluster: Putative uncharacterized protein; n=1;
           Theileria parva|Rep: Putative uncharacterized protein -
           Theileria parva
          Length = 718

 Score = 33.1 bits (72), Expect = 3.8
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -1

Query: 387 MTIIISHQKSRKIIQSFTRNNTQSNETKKLWFLVSVFK 274
           + I +SH KSRK+I SFT N T     K +   V+  K
Sbjct: 221 LDITVSHAKSRKVIDSFTVNLTPETNNKSITKFVNNIK 258


>UniRef50_Q9UYG6 Cluster: DppA-3 dipeptide transport protein; n=4;
           Thermococcaceae|Rep: DppA-3 dipeptide transport protein
           - Pyrococcus abyssi
          Length = 633

 Score = 32.3 bits (70), Expect = 6.6
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +1

Query: 187 IVETDGERWREYGDGFLVLKFTSC 258
           I +TDG+ WREY    LVL F +C
Sbjct: 367 IKDTDGDGWREYNGKDLVLTFAAC 390


>UniRef50_A5E342 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 706

 Score = 31.9 bits (69), Expect = 8.7
 Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
 Frame = -1

Query: 432 SHIHTSLGVISAGQSMT---IIISHQKSRKIIQSFTRNNTQSNETKKLWFLVSVFKTEAM 262
           S ++TSL V++     T   I     +   + Q     +  SNE K  WF +++F    +
Sbjct: 36  SKLNTSLDVLTIQTLATMEDIATLKNQMELLFQMVYNKDYSSNEDKMNWFCINLFLNPFV 95

Query: 261 MTRCKF*HQKSITVFSPSLTIRFDNETERILSLHSELI*DVALYYDKSKFM 109
               +  H   I +F P L      +TE I SL+ +LI D   YY  S ++
Sbjct: 96  ----RHHHGDLIKLFWPLLLRIVIVQTEEITSLY-KLIDDALDYYSYSSWL 141


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 466,709,704
Number of Sequences: 1657284
Number of extensions: 8474807
Number of successful extensions: 17567
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17564
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30946432294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)