Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2396
         (510 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119118-1|AAM50978.1|  911|Drosophila melanogaster RE16777p pro...    29   3.7  
AE014298-580|AAN09113.1|  901|Drosophila melanogaster CG32786-PA...    29   3.7  
AE014298-579|AAF45908.2|  911|Drosophila melanogaster CG2941-PA ...    29   3.7  
AY051618-1|AAK93042.1|  671|Drosophila melanogaster GH26628p pro...    28   6.4  
AE014296-1032|AAF50730.1|  671|Drosophila melanogaster CG10483-P...    28   6.4  

>AY119118-1|AAM50978.1|  911|Drosophila melanogaster RE16777p
           protein.
          Length = 911

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
 Frame = -2

Query: 377 LFLTKNHERLSKVLLVITHKVTKQKNCGFS*VYSKLKL**HDVN-FNTKNPSPYSRHRSP 201
           ++L K  + L +VLL   +   K++      VYS++     D++  N+ +P P  RH + 
Sbjct: 221 IYLAKAMDHLIEVLLYTLNDPLKREKPNCFAVYSQIT---EDISDSNSSDPMPDLRHFAQ 277

Query: 200 SVSTMKQNAFYRYTQN*FKMWHFIMTNQSL 111
            +  + Q  F   + + +  WH + +  +L
Sbjct: 278 ILLDVLQRIFQLVSVDTYMYWHEMKSKSAL 307


>AE014298-580|AAN09113.1|  901|Drosophila melanogaster CG32786-PA
           protein.
          Length = 901

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
 Frame = -2

Query: 377 LFLTKNHERLSKVLLVITHKVTKQKNCGFS*VYSKLKL**HDVN-FNTKNPSPYSRHRSP 201
           ++L K  + L +VLL   +   K++      VYS++     D++  N+ +P P  RH + 
Sbjct: 221 IYLAKAMDHLIEVLLYTLNDPLKREKPNCFAVYSQIT---EDISDSNSSDPMPDLRHFAQ 277

Query: 200 SVSTMKQNAFYRYTQN*FKMWHFIMTNQSL 111
            +  + Q  F   + + +  WH + +  +L
Sbjct: 278 ILLDVLQRIFQLVSVDTYMYWHEMKSKSAL 307


>AE014298-579|AAF45908.2|  911|Drosophila melanogaster CG2941-PA
           protein.
          Length = 911

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
 Frame = -2

Query: 377 LFLTKNHERLSKVLLVITHKVTKQKNCGFS*VYSKLKL**HDVN-FNTKNPSPYSRHRSP 201
           ++L K  + L +VLL   +   K++      VYS++     D++  N+ +P P  RH + 
Sbjct: 221 IYLAKAMDHLIEVLLYTLNDPLKREKPNCFAVYSQIT---EDISDSNSSDPMPDLRHFAQ 277

Query: 200 SVSTMKQNAFYRYTQN*FKMWHFIMTNQSL 111
            +  + Q  F   + + +  WH + +  +L
Sbjct: 278 ILLDVLQRIFQLVSVDTYMYWHEMKSKSAL 307


>AY051618-1|AAK93042.1|  671|Drosophila melanogaster GH26628p
           protein.
          Length = 671

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +1

Query: 217 EYGDGFLVLKFTSCHHSFSFEY--TYEKPQFFCFVTLCVITS 336
           +Y   F V+ F   +H+ +  Y  + E P F+C++T  + +S
Sbjct: 466 KYATSFFVVIFAHKYHTTTDTYPLSKENPWFYCWITAAIFSS 507


>AE014296-1032|AAF50730.1|  671|Drosophila melanogaster CG10483-PA
           protein.
          Length = 671

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +1

Query: 217 EYGDGFLVLKFTSCHHSFSFEY--TYEKPQFFCFVTLCVITS 336
           +Y   F V+ F   +H+ +  Y  + E P F+C++T  + +S
Sbjct: 466 KYATSFFVVIFAHKYHTTTDTYPLSKENPWFYCWITAAIFSS 507


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,041,048
Number of Sequences: 53049
Number of extensions: 389264
Number of successful extensions: 672
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1846255872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)