Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2395
         (483 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL358938-7|CAI14277.1|  661|Homo sapiens cartilage acidic protei...    29   8.6  
AL139239-4|CAI12585.1|  661|Homo sapiens cartilage acidic protei...    29   8.6  
AL139239-3|CAI12584.1|  637|Homo sapiens cartilage acidic protei...    29   8.6  
AJ421515-1|CAD13394.1|  637|Homo sapiens CRTAC1-B protein protein.     29   8.6  
AJ279016-1|CAC08451.1|  653|Homo sapiens chondrocyte expressed p...    29   8.6  
AJ276171-3|CAB98269.1|  650|Homo sapiens ASPIC protein.                29   8.6  
AJ276171-2|CAB98268.1|  653|Homo sapiens ASPIC protein.                29   8.6  
AJ276171-1|CAB98267.1|  661|Homo sapiens ASPIC protein.                29   8.6  

>AL358938-7|CAI14277.1|  661|Homo sapiens cartilage acidic protein 1
           protein.
          Length = 661

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -2

Query: 356 PVSLN-GVAVPACHHDADVDLVVCGVDG 276
           P  LN GVAV    HD D ++VV G +G
Sbjct: 51  PTQLNYGVAVTDVDHDGDFEIVVAGYNG 78


>AL139239-4|CAI12585.1|  661|Homo sapiens cartilage acidic protein 1
           protein.
          Length = 661

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -2

Query: 356 PVSLN-GVAVPACHHDADVDLVVCGVDG 276
           P  LN GVAV    HD D ++VV G +G
Sbjct: 51  PTQLNYGVAVTDVDHDGDFEIVVAGYNG 78


>AL139239-3|CAI12584.1|  637|Homo sapiens cartilage acidic protein 1
           protein.
          Length = 637

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -2

Query: 356 PVSLN-GVAVPACHHDADVDLVVCGVDG 276
           P  LN GVAV    HD D ++VV G +G
Sbjct: 43  PTQLNYGVAVTDVDHDGDFEIVVAGYNG 70


>AJ421515-1|CAD13394.1|  637|Homo sapiens CRTAC1-B protein protein.
          Length = 637

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -2

Query: 356 PVSLN-GVAVPACHHDADVDLVVCGVDG 276
           P  LN GVAV    HD D ++VV G +G
Sbjct: 43  PTQLNYGVAVTDVDHDGDFEIVVAGYNG 70


>AJ279016-1|CAC08451.1|  653|Homo sapiens chondrocyte expressed
           protein 68 kDa protein.
          Length = 653

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -2

Query: 356 PVSLN-GVAVPACHHDADVDLVVCGVDG 276
           P  LN GVAV    HD D ++VV G +G
Sbjct: 43  PTQLNYGVAVTDVDHDGDFEIVVAGYNG 70


>AJ276171-3|CAB98269.1|  650|Homo sapiens ASPIC protein.
          Length = 650

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -2

Query: 356 PVSLN-GVAVPACHHDADVDLVVCGVDG 276
           P  LN GVAV    HD D ++VV G +G
Sbjct: 40  PTQLNYGVAVTDVDHDGDFEIVVAGYNG 67


>AJ276171-2|CAB98268.1|  653|Homo sapiens ASPIC protein.
          Length = 653

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -2

Query: 356 PVSLN-GVAVPACHHDADVDLVVCGVDG 276
           P  LN GVAV    HD D ++VV G +G
Sbjct: 43  PTQLNYGVAVTDVDHDGDFEIVVAGYNG 70


>AJ276171-1|CAB98267.1|  661|Homo sapiens ASPIC protein.
          Length = 661

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -2

Query: 356 PVSLN-GVAVPACHHDADVDLVVCGVDG 276
           P  LN GVAV    HD D ++VV G +G
Sbjct: 51  PTQLNYGVAVTDVDHDGDFEIVVAGYNG 78


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,624,965
Number of Sequences: 237096
Number of extensions: 1159935
Number of successful extensions: 1922
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1922
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)