Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2395
         (483 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022091-1|AAY33507.1|  432|Drosophila melanogaster RE01056p pro...    38   0.005
BT010091-1|AAQ22560.1|  784|Drosophila melanogaster HL05804p pro...    38   0.005
BT003483-1|AAO39486.1|  733|Drosophila melanogaster RE55660p pro...    38   0.005
AE013599-78|AAF57331.2|  733|Drosophila melanogaster CG30437-PB,...    38   0.005
AE013599-77|AAF57332.4|  784|Drosophila melanogaster CG30437-PA,...    38   0.005
AE013599-76|AAN16124.1|  855|Drosophila melanogaster CG30437-PC,...    38   0.005
AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire pro...    28   5.8  
AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-P...    28   5.8  

>BT022091-1|AAY33507.1|  432|Drosophila melanogaster RE01056p
           protein.
          Length = 432

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 19/32 (59%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
 Frame = +1

Query: 316 WWQAGTATPFRET--GSNAFSSTHGLVQTHPS 405
           +WQ   ATP   T   S  FS+THGLVQTHPS
Sbjct: 20  FWQQHVATPSSSTPFDSPFFSATHGLVQTHPS 51


>BT010091-1|AAQ22560.1|  784|Drosophila melanogaster HL05804p
           protein.
          Length = 784

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 19/32 (59%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
 Frame = +1

Query: 316 WWQAGTATPFRET--GSNAFSSTHGLVQTHPS 405
           +WQ   ATP   T   S  FS+THGLVQTHPS
Sbjct: 55  FWQQHVATPSSSTPFDSPFFSATHGLVQTHPS 86


>BT003483-1|AAO39486.1|  733|Drosophila melanogaster RE55660p
           protein.
          Length = 733

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 19/32 (59%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
 Frame = +1

Query: 316 WWQAGTATPFRET--GSNAFSSTHGLVQTHPS 405
           +WQ   ATP   T   S  FS+THGLVQTHPS
Sbjct: 4   FWQQHVATPSSSTPFDSPFFSATHGLVQTHPS 35


>AE013599-78|AAF57331.2|  733|Drosophila melanogaster CG30437-PB,
           isoform B protein.
          Length = 733

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 19/32 (59%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
 Frame = +1

Query: 316 WWQAGTATPFRET--GSNAFSSTHGLVQTHPS 405
           +WQ   ATP   T   S  FS+THGLVQTHPS
Sbjct: 4   FWQQHVATPSSSTPFDSPFFSATHGLVQTHPS 35


>AE013599-77|AAF57332.4|  784|Drosophila melanogaster CG30437-PA,
           isoform A protein.
          Length = 784

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 19/32 (59%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
 Frame = +1

Query: 316 WWQAGTATPFRET--GSNAFSSTHGLVQTHPS 405
           +WQ   ATP   T   S  FS+THGLVQTHPS
Sbjct: 55  FWQQHVATPSSSTPFDSPFFSATHGLVQTHPS 86


>AE013599-76|AAN16124.1|  855|Drosophila melanogaster CG30437-PC,
           isoform C protein.
          Length = 855

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 19/32 (59%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
 Frame = +1

Query: 316 WWQAGTATPFRET--GSNAFSSTHGLVQTHPS 405
           +WQ   ATP   T   S  FS+THGLVQTHPS
Sbjct: 55  FWQQHVATPSSSTPFDSPFFSATHGLVQTHPS 86


>AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire protein.
          Length = 5233

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 344  NGVAVPACHHDADVDLVVCGVDGFFLSFGDHSHTNCKFR 228
            +G +V A    AD D+V+CG    F  FG     +CK +
Sbjct: 1448 SGHSVEAIRFSADTDIVICG----FGMFGGRGEYSCKLK 1482


>AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-PA
            protein.
          Length = 5233

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 344  NGVAVPACHHDADVDLVVCGVDGFFLSFGDHSHTNCKFR 228
            +G +V A    AD D+V+CG    F  FG     +CK +
Sbjct: 1448 SGHSVEAIRFSADTDIVICG----FGMFGGRGEYSCKLK 1482


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,808,702
Number of Sequences: 53049
Number of extensions: 370823
Number of successful extensions: 779
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1684597257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)