Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2394
         (573 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5DDS0 Cluster: SJCHGC04105 protein; n=1; Schistosoma j...    33   4.8  
UniRef50_Q8IKJ6 Cluster: Putative uncharacterized protein; n=1; ...    32   8.3  

>UniRef50_Q5DDS0 Cluster: SJCHGC04105 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC04105 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 164

 Score = 33.1 bits (72), Expect = 4.8
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = +2

Query: 380 ALGYTE*FIAISL-NIESLQVYALFIPYRQALELIFFIVFSQRFFVIL*MSSDRKSSTSY 556
           AL Y   F A+ + +I+ +Q+ A +  YR     +    F+  FF+ L ++ D + +  Y
Sbjct: 68  ALAYVRVFTALGICSIDQIQICATYHLYRMVTINLAQFAFASTFFLYLFLNRDFRETLMY 127

Query: 557 LC 562
           +C
Sbjct: 128 IC 129


>UniRef50_Q8IKJ6 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 900

 Score = 32.3 bits (70), Expect = 8.3
 Identities = 13/31 (41%), Positives = 23/31 (74%)
 Frame = -1

Query: 189 LFNLI*IEQVRKTKARNRNHLKKKVIDL*AI 97
           LFN+  ++++RK    N NH+KKK+I++ +I
Sbjct: 133 LFNIY-LDKIRKYNCHNNNHIKKKIININSI 162


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 486,547,574
Number of Sequences: 1657284
Number of extensions: 8632272
Number of successful extensions: 18316
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18311
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39154548218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)