Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2394
         (573 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   1.4  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   1.4  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    23   1.4  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    23   1.4  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   9.9  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   9.9  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -2

Query: 206 SRLYLNCLISYRLNRLGKQRREIE 135
           S L LNCL + R N   KQ  E+E
Sbjct: 246 SMLSLNCLNTGRTNFTNKQLTELE 269


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -1

Query: 291 DKQKKALLTN*NIILRALFVFSLFKVI 211
           DK    +LT  N+ LR + VFS  KVI
Sbjct: 63  DKIANFMLTFFNVSLRIILVFSKGKVI 89


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -2

Query: 206 SRLYLNCLISYRLNRLGKQRREIE 135
           S L LNCL + R N   KQ  E+E
Sbjct: 35  SMLSLNCLNTGRTNFTNKQLTELE 58


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -2

Query: 206 SRLYLNCLISYRLNRLGKQRREIE 135
           S L LNCL + R N   KQ  E+E
Sbjct: 35  SMLSLNCLNTGRTNFTNKQLTELE 58


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +3

Query: 288 YLHTASNLKGLY*FHRMW 341
           Y+H A  ++ L+ F ++W
Sbjct: 264 YIHNALIVRALFLFFQLW 281


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +3

Query: 288 YLHTASNLKGLY*FHRMW 341
           Y+H A  ++ L+ F ++W
Sbjct: 260 YIHNALIVRALFLFFQLW 277


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,117
Number of Sequences: 336
Number of extensions: 2462
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)