Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2394
         (573 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M59465-1|AAA51550.1|  790|Homo sapiens A20 protein.                    31   2.2  
BC114480-1|AAI14481.1|  790|Homo sapiens tumor necrosis factor, ...    31   2.2  
BC113871-1|AAI13872.1|  790|Homo sapiens tumor necrosis factor, ...    31   2.2  
AY248754-1|AAO61093.1|  790|Homo sapiens tumor necrosis factor, ...    31   2.2  
AL357060-4|CAH72937.1|  790|Homo sapiens tumor necrosis factor, ...    31   2.2  
AL157444-1|CAB75664.1|  636|Homo sapiens hypothetical protein pr...    31   2.2  

>M59465-1|AAA51550.1|  790|Homo sapiens A20 protein.
          Length = 790

 Score = 31.5 bits (68), Expect = 2.2
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +1

Query: 469 PGINFFYRVFTKILCHSVNEFRQKVLNVLPLQN 567
           P   FF  V T+ LCH  +E RQK  N LP  N
Sbjct: 390 PNCPFFMSVNTQPLCHECSERRQKNQNKLPKLN 422


>BC114480-1|AAI14481.1|  790|Homo sapiens tumor necrosis factor,
           alpha-induced protein 3 protein.
          Length = 790

 Score = 31.5 bits (68), Expect = 2.2
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +1

Query: 469 PGINFFYRVFTKILCHSVNEFRQKVLNVLPLQN 567
           P   FF  V T+ LCH  +E RQK  N LP  N
Sbjct: 390 PNCPFFMSVNTQPLCHECSERRQKNQNKLPKLN 422


>BC113871-1|AAI13872.1|  790|Homo sapiens tumor necrosis factor,
           alpha-induced protein 3 protein.
          Length = 790

 Score = 31.5 bits (68), Expect = 2.2
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +1

Query: 469 PGINFFYRVFTKILCHSVNEFRQKVLNVLPLQN 567
           P   FF  V T+ LCH  +E RQK  N LP  N
Sbjct: 390 PNCPFFMSVNTQPLCHECSERRQKNQNKLPKLN 422


>AY248754-1|AAO61093.1|  790|Homo sapiens tumor necrosis factor,
           alpha-induced protein 3 protein.
          Length = 790

 Score = 31.5 bits (68), Expect = 2.2
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +1

Query: 469 PGINFFYRVFTKILCHSVNEFRQKVLNVLPLQN 567
           P   FF  V T+ LCH  +E RQK  N LP  N
Sbjct: 390 PNCPFFMSVNTQPLCHECSERRQKNQNKLPKLN 422


>AL357060-4|CAH72937.1|  790|Homo sapiens tumor necrosis factor,
           alpha-induced protein 3 protein.
          Length = 790

 Score = 31.5 bits (68), Expect = 2.2
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +1

Query: 469 PGINFFYRVFTKILCHSVNEFRQKVLNVLPLQN 567
           P   FF  V T+ LCH  +E RQK  N LP  N
Sbjct: 390 PNCPFFMSVNTQPLCHECSERRQKNQNKLPKLN 422


>AL157444-1|CAB75664.1|  636|Homo sapiens hypothetical protein
           protein.
          Length = 636

 Score = 31.5 bits (68), Expect = 2.2
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +1

Query: 469 PGINFFYRVFTKILCHSVNEFRQKVLNVLPLQN 567
           P   FF  V T+ LCH  +E RQK  N LP  N
Sbjct: 236 PNCPFFMSVNTQPLCHECSERRQKNQNKLPKLN 268


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,052,241
Number of Sequences: 237096
Number of extensions: 1263066
Number of successful extensions: 2086
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2086
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)