Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2392
         (651 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024226-1|ABC86288.1|  619|Drosophila melanogaster LP01683p pro...    31   1.4  
AY070644-1|AAL48115.1|  619|Drosophila melanogaster RH02885p pro...    31   1.4  
AE014296-728|AAS64967.1|  474|Drosophila melanogaster CG12605-PC...    31   1.4  
AE014296-727|AAF47818.1|  619|Drosophila melanogaster CG12605-PB...    31   1.4  
AE014296-726|AAS64966.1|  619|Drosophila melanogaster CG12605-PA...    31   1.4  

>BT024226-1|ABC86288.1|  619|Drosophila melanogaster LP01683p
           protein.
          Length = 619

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = -1

Query: 468 KQTKKFIICKNGKKSNINRKIFCSLLALIMSREVRNLFHLCDISAL*LSR 319
           KQT + +  ++ KK N   K + S+ AL M      L H CDI     SR
Sbjct: 458 KQTHRSLDSQSAKKCNTCGKAYVSMPALAMHLLTHKLSHSCDICGKLFSR 507


>AY070644-1|AAL48115.1|  619|Drosophila melanogaster RH02885p
           protein.
          Length = 619

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = -1

Query: 468 KQTKKFIICKNGKKSNINRKIFCSLLALIMSREVRNLFHLCDISAL*LSR 319
           KQT + +  ++ KK N   K + S+ AL M      L H CDI     SR
Sbjct: 458 KQTHRSLDSQSAKKCNTCGKAYVSMPALAMHLLTHKLSHSCDICGKLFSR 507


>AE014296-728|AAS64967.1|  474|Drosophila melanogaster CG12605-PC,
           isoform C protein.
          Length = 474

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = -1

Query: 468 KQTKKFIICKNGKKSNINRKIFCSLLALIMSREVRNLFHLCDISAL*LSR 319
           KQT + +  ++ KK N   K + S+ AL M      L H CDI     SR
Sbjct: 313 KQTHRSLDSQSAKKCNTCGKAYVSMPALAMHLLTHKLSHSCDICGKLFSR 362


>AE014296-727|AAF47818.1|  619|Drosophila melanogaster CG12605-PB,
           isoform B protein.
          Length = 619

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = -1

Query: 468 KQTKKFIICKNGKKSNINRKIFCSLLALIMSREVRNLFHLCDISAL*LSR 319
           KQT + +  ++ KK N   K + S+ AL M      L H CDI     SR
Sbjct: 458 KQTHRSLDSQSAKKCNTCGKAYVSMPALAMHLLTHKLSHSCDICGKLFSR 507


>AE014296-726|AAS64966.1|  619|Drosophila melanogaster CG12605-PA,
           isoform A protein.
          Length = 619

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = -1

Query: 468 KQTKKFIICKNGKKSNINRKIFCSLLALIMSREVRNLFHLCDISAL*LSR 319
           KQT + +  ++ KK N   K + S+ AL M      L H CDI     SR
Sbjct: 458 KQTHRSLDSQSAKKCNTCGKAYVSMPALAMHLLTHKLSHSCDICGKLFSR 507


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,085,804
Number of Sequences: 53049
Number of extensions: 448252
Number of successful extensions: 716
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)