Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2387
(598 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-... 58 1e-07
UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Anther... 53 6e-06
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|... 44 0.003
UniRef50_A1Y027 Cluster: Putative uncharacterized protein; n=1; ... 37 0.31
UniRef50_Q9SD31 Cluster: Putative uncharacterized protein F24M12... 34 2.9
UniRef50_UPI0000DD7DB5 Cluster: PREDICTED: hypothetical protein;... 33 6.7
UniRef50_Q0DB68 Cluster: Os06g0597800 protein; n=2; Oryza sativa... 32 8.9
UniRef50_Q38FR6 Cluster: Mitotubule-associated protein Gb4, puta... 32 8.9
>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-like
protein; n=9; cellular organisms|Rep: Endonuclease and
reverse transcriptase-like protein - Bombyx mori (Silk
moth)
Length = 960
Score = 58.4 bits (135), Expect = 1e-07
Identities = 27/58 (46%), Positives = 38/58 (65%)
Frame = -2
Query: 336 HFEKAARHENPLVVAAGYYIPVLADRIVNSRRRPKHVISDPPDPLTVLLGTSSTGHHS 163
+F+KA RH+N L+VAA Y P + RRRP+HV++DP DP+T+ L T S+ S
Sbjct: 883 YFDKAMRHDNRLIVAAADYSPNPDHAGASHRRRPRHVLTDPSDPITLALDTFSSNTRS 940
>UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Antheraea
mylitta|Rep: Reverse transcriptase-like - Antheraea
mylitta (Tasar silkworm)
Length = 186
Score = 52.8 bits (121), Expect = 6e-06
Identities = 24/48 (50%), Positives = 31/48 (64%)
Frame = -2
Query: 336 HFEKAARHENPLVVAAGYYIPVLADRIVNSRRRPKHVISDPPDPLTVL 193
+FEKAA H +PLVV+A Y PV RRRP+H+ DPPD +T +
Sbjct: 94 YFEKAANHPSPLVVSAANYQPV--PNAARPRRRPRHIFIDPPDEITAV 139
>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
Length = 191
Score = 44.0 bits (99), Expect = 0.003
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = -2
Query: 264 DRIVNSRRRPKHVISDPPDPLTVLLGTSSTGHHSC 160
D SRR P HV+SDP D L+VLL SSTG+ C
Sbjct: 28 DGATKSRRHPNHVLSDPRDSLSVLLDLSSTGYCPC 62
Score = 32.7 bits (71), Expect = 6.7
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = -1
Query: 448 QVSRFSLDTLSGSRLRSGGIFSKALLLLGLVIA 350
Q +F + SR RS G F +ALLLLGLV+A
Sbjct: 73 QPMKFLAGSSQSSRFRSDGRFCEALLLLGLVLA 105
>UniRef50_A1Y027 Cluster: Putative uncharacterized protein; n=1;
Spironucleus barkhanus|Rep: Putative uncharacterized
protein - Spironucleus barkhanus
Length = 858
Score = 37.1 bits (82), Expect = 0.31
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 249 CLRFGPQERVCSNRQPRREGFRVVPLSRN--GWEYFAITSP 365
C FGP+E V +NR R+ G R PLSR G +Y I P
Sbjct: 135 CCEFGPEECVSTNRSIRQNGLREHPLSRRIAGLQYTKIAPP 175
>UniRef50_Q9SD31 Cluster: Putative uncharacterized protein
F24M12.190; n=2; Arabidopsis thaliana|Rep: Putative
uncharacterized protein F24M12.190 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 968
Score = 33.9 bits (74), Expect = 2.9
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Frame = -1
Query: 439 RFSLDTLSGSRLRSGGIFSKALLLLGLVIAKYSH------PFRESGTTR 311
R S +G+RL+ GG +++LL LG VI K S PFR+S TR
Sbjct: 252 RASQSLSAGTRLKEGGHINRSLLTLGTVIRKLSKGKNGHIPFRDSKLTR 300
>UniRef50_UPI0000DD7DB5 Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 191
Score = 32.7 bits (71), Expect = 6.7
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -1
Query: 418 SGSRLRSGGIFSKALLLLGLVIAKYSHPFRESGTTRK-PSRRGCRLLHTRSCGPNRKQST 242
SG L GG + + + LG++++ P R GT K + GC + SC P+ KQ+
Sbjct: 35 SGGTLGRGGCWGRRMESLGVLLSTEDRP-RPLGTDGKLRPKEGCSSVPKASCSPSWKQAG 93
Query: 241 S 239
S
Sbjct: 94 S 94
>UniRef50_Q0DB68 Cluster: Os06g0597800 protein; n=2; Oryza
sativa|Rep: Os06g0597800 protein - Oryza sativa subsp.
japonica (Rice)
Length = 669
Score = 32.3 bits (70), Expect = 8.9
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = +3
Query: 141 VASDGFDKNDDPCLRYLKAPLVDREDPK*RA*GDVDCLRFGPQERVCSNRQPRREGFRVV 320
+A+DG NDDPCL + D RA + LR G RV +R RR+G ++
Sbjct: 54 MAADGLGTNDDPCL-----GMEFESDGAARAFYNAYALRLGFGIRVARSRSERRKGVELL 108
Query: 321 PLSR 332
+ R
Sbjct: 109 IMKR 112
>UniRef50_Q38FR6 Cluster: Mitotubule-associated protein Gb4,
putative; n=2; Trypanosoma brucei|Rep:
Mitotubule-associated protein Gb4, putative -
Trypanosoma brucei
Length = 8214
Score = 32.3 bits (70), Expect = 8.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 60 FCT*FNTLYSLIIKQFSLWVNLLSEPFVASDGFDKNDDPCLRYLKAPLVDR 212
F T T YS+I+ + ++ V L S+ + D ++PC+RYL ++ R
Sbjct: 350 FYTWVPTNYSIIVLRKNVLVVLGSQELLGGDNLYSLEEPCIRYLDTVMMQR 400
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,644,346
Number of Sequences: 1657284
Number of extensions: 11695484
Number of successful extensions: 30502
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 29725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30499
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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