Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2387
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.4  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   4.5  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 324  AARHENPLVVAAGYYIPVLADRI 256
            AA   +  V+ AGY +PVLA  +
Sbjct: 1560 AAVSPSKTVIDAGYDVPVLAQNL 1582


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 292 SHDERVFVSCRFLEMDGSTLLSL 360
           S  E    +C+F  +D + LLS+
Sbjct: 401 SQSELEITACKFFSIDNALLLSI 423


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -1

Query: 121 LTHKLNCFIMSEYKVLNYVQNIVIYIVNL*HYLFIVI 11
           L H+L+  I    K LN    +++ ++   H++FIV+
Sbjct: 218 LHHRLSKLI----KQLNATYGLILLLMFTSHFIFIVV 250


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,645
Number of Sequences: 336
Number of extensions: 3006
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)