Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2386
(476 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein ... 42 6e-04
M17214-1|AAA28507.1| 122|Drosophila melanogaster protein ( D.me... 40 0.001
X68130-1|CAA48237.1| 943|Drosophila melanogaster protein ( D.me... 40 0.002
U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag p... 40 0.002
X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putat... 39 0.004
BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p pro... 39 0.004
AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein ... 39 0.004
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ... 37 0.012
U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative singl... 36 0.021
AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein ... 36 0.021
AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein ... 36 0.021
X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element prot... 36 0.028
S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein. 36 0.028
AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown prot... 36 0.028
M63450-1|AAA29051.1| 3005|Drosophila melanogaster zinc-finger ho... 35 0.065
AE014135-89|AAF59339.2| 3005|Drosophila melanogaster CG1449-PA p... 35 0.065
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 33 0.20
L42762-1|AAB36617.1| 887|Drosophila melanogaster DNA replicatio... 31 0.81
AY089344-1|AAL90082.1| 922|Drosophila melanogaster AT16542p pro... 31 0.81
AY069702-1|AAL39847.1| 887|Drosophila melanogaster LD47441p pro... 31 0.81
AE014297-720|AAF54207.1| 887|Drosophila melanogaster CG7538-PA ... 31 0.81
BT001321-1|AAN71076.1| 1023|Drosophila melanogaster AT15860p pro... 31 1.1
AE014296-2480|AAF49661.2| 922|Drosophila melanogaster CG13457-P... 30 1.9
AE014296-2479|AAN11789.1| 1023|Drosophila melanogaster CG13457-P... 30 1.9
AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein ... 29 4.3
BT003581-1|AAO39585.1| 946|Drosophila melanogaster LD17329p pro... 28 5.7
AE014297-767|AAF54252.3| 1399|Drosophila melanogaster CG31258-PA... 28 5.7
AY118778-1|AAM50638.1| 1430|Drosophila melanogaster GH12223p pro... 28 7.5
AE014298-2033|AAF48371.1| 263|Drosophila melanogaster CG18313-P... 28 7.5
AE013599-323|AAF59276.1| 1430|Drosophila melanogaster CG1845-PA ... 28 7.5
AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p pro... 27 9.9
AY051990-1|AAK93414.1| 776|Drosophila melanogaster LD45682p pro... 27 9.9
AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptio... 27 9.9
AE014296-2710|AAF49482.1| 776|Drosophila melanogaster CG4925-PA... 27 9.9
AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA... 27 9.9
AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD... 27 9.9
AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB... 27 9.9
AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC... 27 9.9
>AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein
protein.
Length = 951
Score = 41.5 bits (93), Expect = 6e-04
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = -1
Query: 266 SNCHARPRCVKCLGDHATALCTRDQKTATEPPSCVLC 156
++C PRC+KC GDH ++ CT+ + T P +CV C
Sbjct: 667 NSCMKPPRCMKCAGDHLSSCCTKPRST---PATCVNC 700
>M17214-1|AAA28507.1| 122|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 122
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -3
Query: 342 IAVETPHKKGTPSQCHNCQLYGHS 271
I VE PHK+ P QC NCQ YGH+
Sbjct: 26 ITVEEPHKRNAPVQCTNCQEYGHT 49
>X68130-1|CAA48237.1| 943|Drosophila melanogaster protein (
D.melanogaster DNA sequenceof Het-A transposable element
9D4. ).
Length = 943
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1
Query: 266 SNCHARPRCVKCLGDHATALCTRDQKTATEPPSCVLC 156
++C PRC+KC G+H ++ CT K T P +CV C
Sbjct: 659 NSCMRPPRCMKCAGEHLSSCCT---KPRTTPATCVNC 692
>U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag
protein protein.
Length = 921
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1
Query: 266 SNCHARPRCVKCLGDHATALCTRDQKTATEPPSCVLC 156
++C PRC+KC G+H ++ CT K T P +CV C
Sbjct: 637 NSCMRPPRCMKCAGEHLSSCCT---KPRTTPATCVNC 670
>X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putative
RNA bindingprotein protein.
Length = 565
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -3
Query: 342 IAVETPHKKGTPSQCHNCQLYGHS 271
I VE PHK+ P QC NCQ YGH+
Sbjct: 370 ITVEEPHKRINPVQCTNCQEYGHT 393
>BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p
protein.
Length = 409
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -3
Query: 342 IAVETPHKKGTPSQCHNCQLYGHS 271
I VE PHK+ P QC NCQ YGH+
Sbjct: 214 ITVEEPHKRINPVQCTNCQEYGHT 237
>AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein
protein.
Length = 965
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -1
Query: 266 SNCHARPRCVKCLGDHATALCTRDQKTATEPPSCVLC 156
++C PRC+KC G H ++ CT K T P +CV C
Sbjct: 674 NSCMRPPRCMKCAGGHLSSCCT---KPRTTPATCVNC 707
>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
protein.
Length = 1047
Score = 37.1 bits (82), Expect = 0.012
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = -3
Query: 435 REPYKMVLVALQPTPEGKQIFNIRTVCSLSGIAVETPHKKGT--PSQCHNCQLYGHS 271
R P ++ V + P +G + + + SL G V+ K+ + P+QCH CQ +GH+
Sbjct: 749 RNPMRIHEVEVVPKADGSHL-KVLLIKSLGGQTVKVERKRVSKDPTQCHRCQCFGHT 804
>U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative
single-stranded nucleicacid binding protein protein.
Length = 1043
Score = 36.3 bits (80), Expect = 0.021
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = -3
Query: 435 REPYKMVLVALQPTPEGKQIFNIRTVCSLSGIAVETPHKKGT--PSQCHNCQLYGHS 271
R P ++ V + P +G + + + SL G V+ K+ + P+QCH CQ +GH+
Sbjct: 749 RNPMRIHEVEVVPKADGSHL-KVLLLKSLGGQTVKVERKRVSKDPTQCHRCQCFGHT 804
>AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 36.3 bits (80), Expect = 0.021
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = -3
Query: 435 REPYKMVLVALQPTPEGKQIFNIRTVCSLSGIAVETPHKKGT--PSQCHNCQLYGHS 271
R P ++ V + P +G + + + SL G V+ K+ + P+QCH CQ +GH+
Sbjct: 672 RNPMRIHEVEVVPKADGSHL-KVLLLKSLGGQTVKVERKRVSKDPTQCHRCQCFGHT 727
>AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 36.3 bits (80), Expect = 0.021
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = -3
Query: 435 REPYKMVLVALQPTPEGKQIFNIRTVCSLSGIAVETPHKKGT--PSQCHNCQLYGHS 271
R P ++ V + P +G + + + SL G V+ K+ + P+QCH CQ +GH+
Sbjct: 672 RNPMRIHEVEVVPKADGSHL-KVLLLKSLGGQTVKVERKRVSKDPTQCHRCQCFGHT 727
>X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element
protein.
Length = 536
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -1
Query: 266 SNCHARPRCVKCLGDHATALCTRDQKTATEPPSCVLC 156
++C PRC+K G+H ++ CT K T P +CV C
Sbjct: 252 NSCMRPPRCMKSAGEHLSSCCT---KPRTTPATCVNC 285
>S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein.
Length = 536
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -1
Query: 266 SNCHARPRCVKCLGDHATALCTRDQKTATEPPSCVLC 156
++C PRC+K G+H ++ CT K T P +CV C
Sbjct: 252 NSCMRPPRCMKSAGEHLSSCCT---KPRTTPATCVNC 285
>AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown
protein.
Length = 501
Score = 35.9 bits (79), Expect = 0.028
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = -3
Query: 429 PYKMVLVALQPTPEGKQIFNIRTVCSLSGIAVETPHKKGTPSQCHNCQLYGHSS 268
P M + + K+I ++ +C + + +E K+ QCH CQ GH++
Sbjct: 245 PVNMFFLNIAAAANNKEILAVKALCHMR-VVIEPLRKRNAIVQCHRCQQIGHTA 297
>M63450-1|AAA29051.1| 3005|Drosophila melanogaster zinc-finger
homeodomain protein 2 protein.
Length = 3005
Score = 34.7 bits (76), Expect = 0.065
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -1
Query: 401 SLPQRVSKYSTSERSVAFPESPSKPHIRKAHLASAITANYT-GILPSNCHARPRCVKC 231
S PQ+ S SVA P SPS + AS T+++T G + + RP+ V C
Sbjct: 475 SQPQQTPHRSPCSNSVALPVSPSASSVASVGNASTATSSFTIGACSEHINGRPQGVDC 532
>AE014135-89|AAF59339.2| 3005|Drosophila melanogaster CG1449-PA
protein.
Length = 3005
Score = 34.7 bits (76), Expect = 0.065
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -1
Query: 401 SLPQRVSKYSTSERSVAFPESPSKPHIRKAHLASAITANYT-GILPSNCHARPRCVKC 231
S PQ+ S SVA P SPS + AS T+++T G + + RP+ V C
Sbjct: 475 SQPQQTPHRSPCSNSVALPVSPSASSVASVGNASTATSSFTIGACSEHINGRPQGVDC 532
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 33.1 bits (72), Expect = 0.20
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Frame = -1
Query: 275 ILPSNCHARPRCV--KCLGDHATALCTRDQ--KTATEPPSC-VLCPYTGSP----RKLPR 123
++ S+C CV KC+ D +C + + + PSC L YTG+P R++P+
Sbjct: 10957 VVNSDCSRDKSCVNQKCV-DPCPGVCGLNAQCRVSNHLPSCSCLAGYTGNPSSACREIPQ 11015
Query: 122 MPPSPE 105
+PP PE
Sbjct: 11016 LPPPPE 11021
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = -1
Query: 251 RPRCVKCLGDHATALCTRDQKTATEPPSCVLCPYTGSPRKLPRMPPSPE 105
R C+ G +A + + PP PY R+LP P PE
Sbjct: 20958 RDPCLNACGINAICRAINHKAVCSCPPEFYGSPYAQCLRQLPEPEPKPE 21006
>L42762-1|AAB36617.1| 887|Drosophila melanogaster DNA replication
licensing factor protein.
Length = 887
Score = 31.1 bits (67), Expect = 0.81
Identities = 18/63 (28%), Positives = 26/63 (41%)
Frame = -1
Query: 332 KPHIRKAHLASAITANYTGILPSNCHARPRCVKCLGDHATALCTRDQKTATEPPSCVLCP 153
K H+ + + TG+LP + CVKC + + Q T +P SC C
Sbjct: 284 KLHLNQLVRTLGVVTATTGVLPQLSVIKYDCVKC--GYVLGPFVQSQNTEIKPGSCPECQ 341
Query: 152 YTG 144
TG
Sbjct: 342 STG 344
>AY089344-1|AAL90082.1| 922|Drosophila melanogaster AT16542p
protein.
Length = 922
Score = 31.1 bits (67), Expect = 0.81
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = -1
Query: 281 TGILPSNC--HARPRCVKCLGDHATALCTRDQKTATEPPSCVLCPYTGSPRKL 129
T +PS C RP CV C G+H+ C + P SC+ + SPR+L
Sbjct: 754 TNDIPSRCVVETRPECVHCEGEHSEQSCKQH-----SPRSCM----SSSPRQL 797
>AY069702-1|AAL39847.1| 887|Drosophila melanogaster LD47441p
protein.
Length = 887
Score = 31.1 bits (67), Expect = 0.81
Identities = 18/63 (28%), Positives = 26/63 (41%)
Frame = -1
Query: 332 KPHIRKAHLASAITANYTGILPSNCHARPRCVKCLGDHATALCTRDQKTATEPPSCVLCP 153
K H+ + + TG+LP + CVKC + + Q T +P SC C
Sbjct: 284 KLHLNQLVRTLGVVTATTGVLPQLSVIKYDCVKC--GYVLGPFVQSQNTEIKPGSCPECQ 341
Query: 152 YTG 144
TG
Sbjct: 342 STG 344
>AE014297-720|AAF54207.1| 887|Drosophila melanogaster CG7538-PA
protein.
Length = 887
Score = 31.1 bits (67), Expect = 0.81
Identities = 18/63 (28%), Positives = 26/63 (41%)
Frame = -1
Query: 332 KPHIRKAHLASAITANYTGILPSNCHARPRCVKCLGDHATALCTRDQKTATEPPSCVLCP 153
K H+ + + TG+LP + CVKC + + Q T +P SC C
Sbjct: 284 KLHLNQLVRTLGVVTATTGVLPQLSVIKYDCVKC--GYVLGPFVQSQNTEIKPGSCPECQ 341
Query: 152 YTG 144
TG
Sbjct: 342 STG 344
>BT001321-1|AAN71076.1| 1023|Drosophila melanogaster AT15860p
protein.
Length = 1023
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -1
Query: 281 TGILPSNC--HARPRCVKCLGDHATALCTRDQKTATEPPSCVLCPYTGSPRKL 129
T +PS C RP CV C G+H C + P SC+ + SPR+L
Sbjct: 855 TNDIPSRCVVETRPECVHCEGEHCEQSCKQH-----SPRSCM----SSSPRQL 898
>AE014296-2480|AAF49661.2| 922|Drosophila melanogaster CG13457-PA,
isoform A protein.
Length = 922
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -1
Query: 281 TGILPSNC--HARPRCVKCLGDHATALCTRDQKTATEPPSCVLCPYTGSPRKL 129
T +PS C RP CV C G+H C + P SC+ + SPR++
Sbjct: 754 TNDIPSRCVVETRPECVHCEGEHCEQSCKQH-----SPRSCM----SSSPRQI 797
>AE014296-2479|AAN11789.1| 1023|Drosophila melanogaster CG13457-PB,
isoform B protein.
Length = 1023
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -1
Query: 281 TGILPSNC--HARPRCVKCLGDHATALCTRDQKTATEPPSCVLCPYTGSPRKL 129
T +PS C RP CV C G+H C + P SC+ + SPR++
Sbjct: 855 TNDIPSRCVVETRPECVHCEGEHCEQSCKQH-----SPRSCM----SSSPRQI 898
>AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein
protein.
Length = 257
Score = 28.7 bits (61), Expect = 4.3
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -3
Query: 309 PSQCHNCQLYGHS 271
P+QCH CQ +GH+
Sbjct: 2 PTQCHRCQCFGHT 14
>BT003581-1|AAO39585.1| 946|Drosophila melanogaster LD17329p
protein.
Length = 946
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -3
Query: 201 SRSKNRDGTA*LRPVSVHRVTPQITAD-APEPRK*IAVSPAKTASELP 61
+RS RD A ++ V VT + AP PR+ A SP K+ ++LP
Sbjct: 371 NRSVRRDAVA-MKSVPTSPVTALSSPPIAPSPRRSAAASPQKSIAQLP 417
>AE014297-767|AAF54252.3| 1399|Drosophila melanogaster CG31258-PA
protein.
Length = 1399
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -3
Query: 201 SRSKNRDGTA*LRPVSVHRVTPQITAD-APEPRK*IAVSPAKTASELP 61
+RS RD A ++ V VT + AP PR+ A SP K+ ++LP
Sbjct: 371 NRSVRRDAVA-MKSVPTSPVTALSSPPIAPSPRRSAAASPQKSIAQLP 417
>AY118778-1|AAM50638.1| 1430|Drosophila melanogaster GH12223p
protein.
Length = 1430
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 209 LCTRDQKTATEPPSCVLCPYTGSPRK 132
LC R ++ ++P +CVLCP G K
Sbjct: 326 LCRRCLQSPSKPVNCVLCPNAGGAFK 351
>AE014298-2033|AAF48371.1| 263|Drosophila melanogaster CG18313-PA
protein.
Length = 263
Score = 27.9 bits (59), Expect = 7.5
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = -2
Query: 223 ITPRPSALAIKKPRRNRLAASCVRTQGHPANYRGCPRAPKINRRVARQNRLRA-SGPDIK 47
+TP+P A ++KKP V + R PR K+ +++ N A +G D
Sbjct: 133 MTPKPEAFSVKKPESEE-TIKVVAKKPKKLRNRVRPRNKKVQMMLSKNNEEAAMAGGD-- 189
Query: 46 ASAPSVSQAKPAFV 5
S P +S K +
Sbjct: 190 -SEPKLSNGKSILI 202
>AE013599-323|AAF59276.1| 1430|Drosophila melanogaster CG1845-PA
protein.
Length = 1430
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 209 LCTRDQKTATEPPSCVLCPYTGSPRK 132
LC R ++ ++P +CVLCP G K
Sbjct: 326 LCRRCLQSPSKPVNCVLCPNAGGAFK 351
>AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p
protein.
Length = 1153
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -2
Query: 148 QGHPANYRGCPRAPKINRRVARQNRLRASGPDIKASAPSVSQAKP 14
QGHP + G P + ++ +Q + + GP PS +Q P
Sbjct: 275 QGHPQHGHGLPPSHTSQQQQQQQQQQQPGGPAGTVRTPSPAQQPP 319
>AY051990-1|AAK93414.1| 776|Drosophila melanogaster LD45682p
protein.
Length = 776
Score = 27.5 bits (58), Expect = 9.9
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = -3
Query: 312 TP-SQCHNCQ--LYGHSS**LSRAPPMRQVFRRSRHGPLHSRSKNRDGTA*LRPVSVHRV 142
TP S C NCQ + G+ + P R R S HG +HS S+ ++ V+
Sbjct: 559 TPISYCSNCQQAINGYPT----ENPQQRSHSRSSSHGSMHSGSRRASESSESETVASSAT 614
Query: 141 TPQITADAPEPRK*IAVSPAK 79
T Q P P++ + P+K
Sbjct: 615 TVQ----QPPPQQDLQAVPSK 631
>AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptional
corepressor Atro protein.
Length = 1985
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -2
Query: 148 QGHPANYRGCPRAPKINRRVARQNRLRASGPDIKASAPSVSQAKP 14
QGHP + G P + ++ +Q + + GP PS +Q P
Sbjct: 1107 QGHPQHGHGLPPSHTSQQQQQQQQQQQPGGPAGTVRTPSPAQQPP 1151
>AE014296-2710|AAF49482.1| 776|Drosophila melanogaster CG4925-PA
protein.
Length = 776
Score = 27.5 bits (58), Expect = 9.9
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = -3
Query: 312 TP-SQCHNCQ--LYGHSS**LSRAPPMRQVFRRSRHGPLHSRSKNRDGTA*LRPVSVHRV 142
TP S C NCQ + G+ + P R R S HG +HS S+ ++ V+
Sbjct: 559 TPISYCSNCQQAINGYPT----ENPQQRSHSRSSSHGSMHSGSRRASESSESETVASSAT 614
Query: 141 TPQITADAPEPRK*IAVSPAK 79
T Q P P++ + P+K
Sbjct: 615 TVQ----QPPPQQDLQAVPSK 631
>AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA,
isoform A protein.
Length = 1966
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -2
Query: 148 QGHPANYRGCPRAPKINRRVARQNRLRASGPDIKASAPSVSQAKP 14
QGHP + G P + ++ +Q + + GP PS +Q P
Sbjct: 1107 QGHPQHGHGLPPSHTSQQQQQQQQQQQPGGPAGTVRTPSPAQQPP 1151
>AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD,
isoform D protein.
Length = 1985
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -2
Query: 148 QGHPANYRGCPRAPKINRRVARQNRLRASGPDIKASAPSVSQAKP 14
QGHP + G P + ++ +Q + + GP PS +Q P
Sbjct: 1107 QGHPQHGHGLPPSHTSQQQQQQQQQQQPGGPAGTVRTPSPAQQPP 1151
>AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB,
isoform B protein.
Length = 1985
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -2
Query: 148 QGHPANYRGCPRAPKINRRVARQNRLRASGPDIKASAPSVSQAKP 14
QGHP + G P + ++ +Q + + GP PS +Q P
Sbjct: 1107 QGHPQHGHGLPPSHTSQQQQQQQQQQQPGGPAGTVRTPSPAQQPP 1151
>AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC,
isoform C protein.
Length = 1988
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -2
Query: 148 QGHPANYRGCPRAPKINRRVARQNRLRASGPDIKASAPSVSQAKP 14
QGHP + G P + ++ +Q + + GP PS +Q P
Sbjct: 1107 QGHPQHGHGLPPSHTSQQQQQQQQQQQPGGPAGTVRTPSPAQQPP 1151
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,275,863
Number of Sequences: 53049
Number of extensions: 608150
Number of successful extensions: 2121
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2119
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1643002263
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -