Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2383
         (660 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.96 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   1.7  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   1.7  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   1.7  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   1.7  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   1.7  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   1.7  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   1.7  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    23   1.7  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   1.7  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   2.9  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    22   5.1  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   9.0  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   9.0  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   9.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +1

Query: 121 ILINKYYCSYYAVQLVMIFFEFTICIRFLFTIYFEMIQVSYIF 249
           IL+  YY  YYA  +  +   F +CI +     F ++ + Y +
Sbjct: 109 ILLCVYYF-YYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFY 150



 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 121 ILINKYYCSYYAVQLVMIFFEFTICIRFLFTIYF 222
           +L+  YY  Y  +     F  FT+ + FL  IY+
Sbjct: 254 LLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYY 287


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 398 PMDFSNAGAEPRHCLPLNT 454
           P D S  GA PR   PL+T
Sbjct: 113 PQDLSTNGAPPRSTPPLST 131



 Score = 21.8 bits (44), Expect = 5.1
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 598 PYYLEPRGHP 569
           PY++ P GHP
Sbjct: 288 PYHMSPYGHP 297


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 398 PMDFSNAGAEPRHCLPLNT 454
           P D S  GA PR   PL+T
Sbjct: 113 PQDLSTNGAPPRSTPPLST 131



 Score = 21.8 bits (44), Expect = 5.1
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 598 PYYLEPRGHP 569
           PY++ P GHP
Sbjct: 288 PYHMSPYGHP 297


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 398 PMDFSNAGAEPRHCLPLNT 454
           P D S  GA PR   PL+T
Sbjct: 113 PQDLSTNGAPPRSTPPLST 131


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 398 PMDFSNAGAEPRHCLPLNT 454
           P D S  GA PR   PL+T
Sbjct: 113 PQDLSTNGAPPRSTPPLST 131



 Score = 21.8 bits (44), Expect = 5.1
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 598 PYYLEPRGHP 569
           PY++ P GHP
Sbjct: 288 PYHMSPYGHP 297


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 398 PMDFSNAGAEPRHCLPLNT 454
           P D S  GA PR   PL+T
Sbjct: 113 PQDLSTNGAPPRSTPPLST 131


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 398 PMDFSNAGAEPRHCLPLNT 454
           P D S  GA PR   PL+T
Sbjct: 69  PQDLSTNGAPPRSTPPLST 87



 Score = 21.8 bits (44), Expect = 5.1
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 598 PYYLEPRGHP 569
           PY++ P GHP
Sbjct: 244 PYHMSPYGHP 253


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 398 PMDFSNAGAEPRHCLPLNT 454
           P D S  GA PR   PL+T
Sbjct: 113 PQDLSTNGAPPRSTPPLST 131



 Score = 21.8 bits (44), Expect = 5.1
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 598 PYYLEPRGHP 569
           PY++ P GHP
Sbjct: 288 PYHMSPYGHP 297


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 398 PMDFSNAGAEPRHCLPLNT 454
           P D S  GA PR   PL+T
Sbjct: 113 PQDLSTNGAPPRSTPPLST 131


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 398 PMDFSNAGAEPRHCLPLNT 454
           P D S  GA PR   PL+T
Sbjct: 113 PQDLSTNGAPPRSTPPLST 131



 Score = 21.8 bits (44), Expect = 5.1
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 598 PYYLEPRGHP 569
           PY++ P GHP
Sbjct: 288 PYHMSPYGHP 297


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +1

Query: 151 YAVQLVMIFFEFTICIRFLFTIYFEMIQV 237
           Y      IFF F IC  F+  I   ++ V
Sbjct: 67  YMYAFTHIFFFFAICCDFIALIVVNIVHV 95


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 598 PYYLEPRGHP 569
           PY++ P GHP
Sbjct: 76  PYHMSPYGHP 85


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 392 PLPMDFSNAGAEPRHCLP 445
           P P + SN+G+  RH  P
Sbjct: 158 PAPGEVSNSGSFSRHAHP 175


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 392 PLPMDFSNAGAEPRHCLP 445
           P P + SN+G+  RH  P
Sbjct: 158 PAPGEVSNSGSFSRHAHP 175


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -3

Query: 601 HPYYLEPRGHPQCVSRGLFATYHP 530
           HPY +   G+   +S G +  Y P
Sbjct: 126 HPYTVISNGYSSPMSSGSYDPYSP 149


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 240 TNLYHFEINSE*KTNTNSEFEENHY 166
           TNL + +IN + K    S+  +N Y
Sbjct: 114 TNLQYIDINLQNKGKKESKLMKNFY 138


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,486
Number of Sequences: 336
Number of extensions: 3865
Number of successful extensions: 28
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)