Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2383
         (660 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical pr...    31   0.96 
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr...    29   3.9  
L16560-4|AAA27997.1|  111|Caenorhabditis elegans Hypothetical pr...    29   3.9  
AL021470-3|CAA16291.2|  414|Caenorhabditis elegans Hypothetical ...    28   6.8  
U50312-10|AAY86208.1|  356|Caenorhabditis elegans Hypothetical p...    27   8.9  

>Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical
           protein T23F1.5 protein.
          Length = 1262

 Score = 30.7 bits (66), Expect = 0.96
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -3

Query: 622 PGYRSRVHPYYLEPRGHPQCVSRGLFATYHPAM 524
           PG  +  +PYY  P G P  VS G +  Y P +
Sbjct: 152 PGQTTGAYPYYPGPAGPPVPVSTGSYGLYGPTV 184


>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
           protein C01G8.9a protein.
          Length = 1724

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -3

Query: 634 YIAPPGYRSRVHPYYLEPRGHP 569
           Y  PPGY +   PY + PR HP
Sbjct: 102 YQMPPGYPAGYPPYGMPPRHHP 123


>L16560-4|AAA27997.1|  111|Caenorhabditis elegans Hypothetical
           protein D2007.1 protein.
          Length = 111

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 506 RCFPRAMTCPSSNEACG 456
           RCFPR   CP + + CG
Sbjct: 78  RCFPRLSNCPVTRDQCG 94


>AL021470-3|CAA16291.2|  414|Caenorhabditis elegans Hypothetical
           protein Y17D7A.1 protein.
          Length = 414

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 261 SACSKYTKETV*YFSDFVLNIFFYIFIALVGSIRP 365
           S C+KYT E + +F D   N F Y  +  +  ++P
Sbjct: 280 SWCTKYTNEQMQHFIDNTQNSFLYKLVDYMMDLKP 314


>U50312-10|AAY86208.1|  356|Caenorhabditis elegans Hypothetical
           protein B0222.11 protein.
          Length = 356

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -1

Query: 615 IGVEFIHTTWSHAVIHSAFPEVFLPRTIRLWNELPSTVFPA 493
           IG+ F  +  +  V       V L  T  +W  LPST +PA
Sbjct: 223 IGIRFPISCTTRGVTPDGLGTVSLCSTCWVWRRLPSTYYPA 263


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,306,866
Number of Sequences: 27780
Number of extensions: 337333
Number of successful extensions: 837
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)