Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2382
         (634 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   2.1  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   2.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   8.6  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +3

Query: 330 SNVNKVLCSERERVVKIESKLYLDYNAAPL 419
           S +++ L S+  + VKI +K+YL Y ++ L
Sbjct: 104 SKIDETLNSKPLKPVKIRTKVYLVYCSSAL 133


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +3

Query: 330 SNVNKVLCSERERVVKIESKLYLDYNAAPL 419
           S +++ L S+  + VKI +K+YL Y ++ L
Sbjct: 100 SKIDETLNSKPLKPVKIRTKVYLVYCSSAL 129


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 234 TARTSTVSKSQWPPLQRV 181
           T RT+TVS ++ PP   V
Sbjct: 445 TQRTTTVSTTEAPPAPAV 462


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,057
Number of Sequences: 336
Number of extensions: 2762
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)