Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2380
(623 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VHN6 Cluster: 39S ribosomal protein L19, mitochondria... 287 2e-76
UniRef50_UPI0000519B5F Cluster: PREDICTED: similar to mitochondr... 226 3e-58
UniRef50_UPI0000E461F5 Cluster: PREDICTED: hypothetical protein;... 221 1e-56
UniRef50_Q95Y83 Cluster: Probable 39S ribosomal protein L19, mit... 210 2e-53
UniRef50_P49406 Cluster: 39S ribosomal protein L19, mitochondria... 198 1e-49
UniRef50_Q5DA35 Cluster: SJCHGC06253 protein; n=1; Schistosoma j... 178 8e-44
UniRef50_A7SD84 Cluster: Predicted protein; n=1; Nematostella ve... 90 5e-17
UniRef50_Q5YBB0 Cluster: 50S ribosomal protein L19; n=1; Helicos... 68 2e-10
UniRef50_Q00VY1 Cluster: 50S ribosomal protein L19; n=2; Ostreoc... 68 2e-10
UniRef50_A7PCQ9 Cluster: Chromosome chr17 scaffold_12, whole gen... 65 1e-09
UniRef50_A6GIE4 Cluster: 50S ribosomal protein L19; n=1; Plesioc... 64 2e-09
UniRef50_Q8RXX5 Cluster: 50S ribosomal protein L19-2, chloroplas... 62 8e-09
UniRef50_A2X277 Cluster: Ribosomal protein L19; n=2; Oryza sativ... 62 1e-08
UniRef50_Q5FGP4 Cluster: 50S ribosomal protein L19; n=13; Ricket... 62 1e-08
UniRef50_Q9LYF5 Cluster: Ribosomal protein L19; n=3; Arabidopsis... 61 2e-08
UniRef50_Q3A2E9 Cluster: 50S ribosomal protein L19; n=8; Bacteri... 60 6e-08
UniRef50_Q7MA03 Cluster: 50S ribosomal protein L19; n=23; Bacter... 56 9e-07
UniRef50_A5N817 Cluster: 50S ribosomal protein L19; n=10; Bacter... 55 1e-06
UniRef50_P58167 Cluster: 50S ribosomal protein L19; n=83; Proteo... 55 2e-06
UniRef50_Q9X1Q7 Cluster: 50S ribosomal protein L19; n=15; Bacter... 54 2e-06
UniRef50_Q74FG1 Cluster: 50S ribosomal protein L19; n=55; Bacter... 53 5e-06
UniRef50_Q5LNE8 Cluster: 50S ribosomal protein L19; n=47; Bacter... 53 6e-06
UniRef50_Q2GCN5 Cluster: 50S ribosomal protein L19; n=1; Neorick... 52 8e-06
UniRef50_P58168 Cluster: 50S ribosomal protein L19; n=40; Bacter... 52 8e-06
UniRef50_Q1G9L7 Cluster: 50S ribosomal protein L19; n=19; Bacter... 52 8e-06
UniRef50_Q833P5 Cluster: 50S ribosomal protein L19; n=9; Bacteri... 52 1e-05
UniRef50_Q2J700 Cluster: 50S ribosomal protein L19; n=10; Bacter... 52 1e-05
UniRef50_Q6AEA5 Cluster: 50S ribosomal protein L19; n=14; Bacter... 51 2e-05
UniRef50_Q9PPJ3 Cluster: 50S ribosomal protein L19; n=29; Bacter... 51 2e-05
UniRef50_Q7VDB0 Cluster: 50S ribosomal protein L19; n=35; cellul... 51 3e-05
UniRef50_Q8EWU9 Cluster: 50S ribosomal protein L19; n=29; Bacter... 50 3e-05
UniRef50_Q6KHL6 Cluster: 50S ribosomal protein L19; n=12; Bacter... 50 6e-05
UniRef50_A6BZ40 Cluster: 50S ribosomal protein L19; n=1; Plancto... 49 8e-05
UniRef50_Q2JHW3 Cluster: 50S ribosomal protein L19; n=6; cellula... 49 1e-04
UniRef50_Q8YLK1 Cluster: 50S ribosomal protein L19; n=14; cellul... 49 1e-04
UniRef50_Q4U9Y3 Cluster: Ribosomal protein L19; n=3; Piroplasmid... 48 2e-04
UniRef50_Q9PH36 Cluster: 50S ribosomal protein L19; n=24; Proteo... 47 3e-04
UniRef50_Q4UNA7 Cluster: 50S ribosomal protein L19; n=58; Bacter... 47 4e-04
UniRef50_O67767 Cluster: 50S ribosomal protein L19; n=6; Bacteri... 47 4e-04
UniRef50_Q55IQ2 Cluster: Ribosomal protein L19; n=2; Filobasidie... 46 7e-04
UniRef50_Q9G875 Cluster: Ribosomal protein L19; n=1; Malawimonas... 45 0.001
UniRef50_P66081 Cluster: 50S ribosomal protein L19; n=19; Mycoba... 45 0.002
UniRef50_Q9RWB4 Cluster: 50S ribosomal protein L19; n=16; Bacter... 45 0.002
UniRef50_Q4P0G9 Cluster: Ribosomal protein L19; n=1; Ustilago ma... 44 0.002
UniRef50_Q87LT1 Cluster: 50S ribosomal protein L19; n=67; Gammap... 44 0.003
UniRef50_P36239 Cluster: 50S ribosomal protein L19; n=4; cellula... 44 0.003
UniRef50_Q72JU9 Cluster: 50S ribosomal protein L19; n=2; Thermus... 43 0.005
UniRef50_Q4A881 Cluster: 50S ribosomal protein L19; n=5; Mycopla... 43 0.007
UniRef50_O83879 Cluster: 50S ribosomal protein L19; n=7; Bacteri... 42 0.009
UniRef50_Q8KD91 Cluster: 50S ribosomal protein L19; n=10; Chloro... 42 0.009
UniRef50_Q9UT87 Cluster: Mitochondrial ribosomal protein subunit... 42 0.012
UniRef50_Q1DSW0 Cluster: Ribosomal protein L19; n=1; Coccidioide... 42 0.016
UniRef50_Q4WUS4 Cluster: Ribosomal protein L19; n=5; Trichocomac... 41 0.028
UniRef50_Q7RYW8 Cluster: Ribosomal protein L19; n=2; Sordariales... 40 0.037
UniRef50_Q6ML99 Cluster: 50S ribosomal protein L19; n=7; Bacteri... 40 0.064
UniRef50_A6RRM0 Cluster: Ribosomal protein L19; n=1; Botryotinia... 39 0.085
UniRef50_A6YG73 Cluster: Ribosomal protein L19; n=1; Leptosira t... 39 0.11
UniRef50_Q9TKZ4 Cluster: Chloroplast 50S ribosomal protein L19; ... 39 0.11
UniRef50_Q4YAR9 Cluster: Ribosomal protein L19-like protein, put... 38 0.15
UniRef50_Q5L0P3 Cluster: 50S ribosomal protein L19; n=7; Bacteri... 38 0.20
UniRef50_Q2IJ55 Cluster: 50S ribosomal protein L19; n=4; Cystoba... 38 0.20
UniRef50_Q2GRM9 Cluster: Putative uncharacterized protein; n=1; ... 38 0.26
UniRef50_Q5L5L9 Cluster: 50S ribosomal protein L19; n=23; Bacter... 38 0.26
UniRef50_Q9TM06 Cluster: Chloroplast 50S ribosomal protein L19; ... 38 0.26
UniRef50_Q0TYF8 Cluster: Ribosomal protein L19; n=1; Phaeosphaer... 37 0.34
UniRef50_P25626 Cluster: 54S ribosomal protein IMG1, mitochondri... 37 0.34
UniRef50_Q6FKK6 Cluster: Similar to sp|P25626 Saccharomyces cere... 37 0.45
UniRef50_P51331 Cluster: Chloroplast 50S ribosomal protein L19; ... 37 0.45
UniRef50_A6LXF7 Cluster: Glycoside hydrolase, family 31; n=6; Ba... 36 0.60
UniRef50_Q20EU4 Cluster: Ribosomal protein L19; n=2; Chlorophyta... 36 0.60
UniRef50_Q6C0I6 Cluster: Similar to KLLA-IPF1520.1 Kluyveromyces... 36 0.60
UniRef50_A0YW97 Cluster: DEAD/DEAH box helicase-like protein; n=... 36 0.79
UniRef50_Q8F3L4 Cluster: 50S ribosomal protein L19; n=5; Spiroch... 36 0.79
UniRef50_Q64RW6 Cluster: Conserved protein found in conjugate tr... 36 1.0
UniRef50_Q1ACJ4 Cluster: Ribosomal protein L19; n=1; Chara vulga... 36 1.0
UniRef50_Q06J53 Cluster: 50S ribosomal protein L19; n=1; Bigelow... 36 1.0
UniRef50_UPI00006CBFD0 Cluster: hypothetical protein TTHERM_0040... 35 1.8
UniRef50_Q4G3E5 Cluster: Ribosomal protein L19; n=1; Emiliania h... 34 3.2
UniRef50_Q05740 Cluster: Protein tonB; n=9; Enterobacteriaceae|R... 34 3.2
UniRef50_Q3ZZA7 Cluster: 50S ribosomal protein L19; n=5; Bacteri... 34 3.2
UniRef50_A0CTC9 Cluster: Chromosome undetermined scaffold_27, wh... 33 4.2
UniRef50_A6GQR6 Cluster: Putative lipoprotein; n=1; Limnobacter ... 33 5.6
UniRef50_A3Y6M4 Cluster: Transcriptional Regulator, LysR family ... 33 5.6
UniRef50_Q8F7Z4 Cluster: Putative uncharacterized protein; n=4; ... 32 9.7
UniRef50_Q73QY9 Cluster: Putative uncharacterized protein; n=2; ... 32 9.7
>UniRef50_Q9VHN6 Cluster: 39S ribosomal protein L19, mitochondrial
precursor; n=6; Endopterygota|Rep: 39S ribosomal protein
L19, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 306
Score = 287 bits (703), Expect = 2e-76
Identities = 127/177 (71%), Positives = 150/177 (84%)
Frame = -1
Query: 533 RHAYPEFLPDPNPKWRNSLREKLERADMLKRRNQIDIPEFYVGSILAVTIADPHSQGKTN 354
R YPEFLPDP +WRN +REKLER DML RR QID+PEFYVGS+LAVT +DPH+ GKT+
Sbjct: 63 RFVYPEFLPDPKVEWRNLVREKLERLDMLDRRKQIDLPEFYVGSVLAVTSSDPHAAGKTS 122
Query: 353 RFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLR 174
RFVGICI R CGLRA F LRNV+DHQG+EV Y+LYDPTI KI+VLR+EKRLDD LFYLR
Sbjct: 123 RFVGICINRDRCGLRARFILRNVIDHQGMEVVYELYDPTILKIEVLRLEKRLDDSLFYLR 182
Query: 173 DALPEYSTFSFDMDPEILPEGTPVPINPVKVELKPKPWLERWERQELQGISNIEQYL 3
DALPEYSTF +M+ E L EG PVP+N +KV L+P+PWLERWERQ L+G++NI++YL
Sbjct: 183 DALPEYSTFDENMEAEPLEEGAPVPVNDIKVVLRPRPWLERWERQNLRGVANIDEYL 239
>UniRef50_UPI0000519B5F Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L19 CG8039-PA; n=1; Apis
mellifera|Rep: PREDICTED: similar to mitochondrial
ribosomal protein L19 CG8039-PA - Apis mellifera
Length = 300
Score = 226 bits (553), Expect = 3e-58
Identities = 106/173 (61%), Positives = 131/173 (75%)
Frame = -1
Query: 533 RHAYPEFLPDPNPKWRNSLREKLERADMLKRRNQIDIPEFYVGSILAVTIADPHSQGKTN 354
R YPEFLPDPNP +RN++REKLER DML RR+ ++IPEFYVGSILAVT +D H+ K N
Sbjct: 61 RFIYPEFLPDPNPLYRNNMREKLERMDMLSRRSVLNIPEFYVGSILAVTYSDLHTNEKIN 120
Query: 353 RFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLR 174
+FVGICI RKG GLR+ F LRNVV+ +GVEV YDLYDP I KI L++E+RLDD+L YLR
Sbjct: 121 KFVGICILRKGTGLRSSFLLRNVVNGEGVEVSYDLYDPAIQKIDCLKLERRLDDELLYLR 180
Query: 173 DALPEYSTFSFDMDPEILPEGTPVPINPVKVELKPKPWLERWERQELQGISNI 15
DA EYSTF FDM+ E VPIN +K+ L P PW +WE + L+G+ ++
Sbjct: 181 DAPLEYSTFPFDMEME-STFSKSVPINKIKIPLNPLPWSMKWELKNLKGVKDL 232
>UniRef50_UPI0000E461F5 Cluster: PREDICTED: hypothetical protein;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 327
Score = 221 bits (539), Expect = 1e-56
Identities = 110/200 (55%), Positives = 134/200 (67%), Gaps = 1/200 (0%)
Frame = -1
Query: 608 PPSR*LKKLRRLGVDLKKVNPLLENRHAY-PEFLPDPNPKWRNSLREKLERADMLKRRNQ 432
PPS G KKV ++ R + PEF+P R+ L++ LER D KRR
Sbjct: 67 PPSSHHAPATTRGPRRKKVGEAVQERKFFSPEFMPPMGQ--RSKLKDFLEREDCYKRREV 124
Query: 431 IDIPEFYVGSILAVTIADPHSQGKTNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYD 252
+D+PEFY+GSILAVT++DPH+ GK NRFVGICIERK GL A F LRN +D QG+E+ Y+
Sbjct: 125 LDVPEFYLGSILAVTVSDPHAPGKENRFVGICIERKNYGLGASFKLRNCIDEQGIEINYE 184
Query: 251 LYDPTIHKIQVLRVEKRLDDKLFYLRDALPEYSTFSFDMDPEILPEGTPVPINPVKVELK 72
LY+P I KI+V+R+EKRLD L YLRDALPEYST DM P G PVP+N VKV++K
Sbjct: 185 LYNPLIKKIEVIRLEKRLDRHLLYLRDALPEYSTIDPDMTTIKHPPGKPVPVNDVKVKMK 244
Query: 71 PKPWLERWERQELQGISNIE 12
PKPW RWER QGI E
Sbjct: 245 PKPWHMRWERFGFQGIDMTE 264
>UniRef50_Q95Y83 Cluster: Probable 39S ribosomal protein L19,
mitochondrial precursor; n=2; Caenorhabditis|Rep:
Probable 39S ribosomal protein L19, mitochondrial
precursor - Caenorhabditis elegans
Length = 288
Score = 210 bits (514), Expect = 2e-53
Identities = 99/169 (58%), Positives = 126/169 (74%)
Frame = -1
Query: 524 YPEFLPDPNPKWRNSLREKLERADMLKRRNQIDIPEFYVGSILAVTIADPHSQGKTNRFV 345
YP+FL P RN+L+E+LER DML+RR IDIPEFYVGSI+AVT +D + K +RFV
Sbjct: 49 YPDFLQSPVWNRRNALKEELERQDMLERRMNIDIPEFYVGSIVAVTSSDKNLGSKEHRFV 108
Query: 344 GICIERKGCGLRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRDAL 165
GICI R+ GL +FTLRN +++ GVEV YDLY+PTI KI+ L++EKRLD+ L YL DAL
Sbjct: 109 GICIRREKEGLLHQFTLRNTIENIGVEVVYDLYNPTIKKIETLKLEKRLDNDLSYLVDAL 168
Query: 164 PEYSTFSFDMDPEILPEGTPVPINPVKVELKPKPWLERWERQELQGISN 18
PEYSTF F M+P+ P GTP+P+N KV+LK PW RWE ++GI +
Sbjct: 169 PEYSTFDFHMEPQAHPAGTPIPVNECKVKLKTPPWTRRWEVASVRGIED 217
>UniRef50_P49406 Cluster: 39S ribosomal protein L19, mitochondrial
precursor; n=28; Euteleostomi|Rep: 39S ribosomal protein
L19, mitochondrial precursor - Homo sapiens (Human)
Length = 292
Score = 198 bits (482), Expect = 1e-49
Identities = 91/166 (54%), Positives = 122/166 (73%)
Frame = -1
Query: 539 ENRHAYPEFLPDPNPKWRNSLREKLERADMLKRRNQIDIPEFYVGSILAVTIADPHSQGK 360
E R PEF+P + L+ ++ER DML+RR + IPEFYVGSIL VT ADP++ GK
Sbjct: 72 ERRFLSPEFIPRRGRT--DPLKFQIERKDMLERRKVLHIPEFYVGSILRVTTADPYASGK 129
Query: 359 TNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFY 180
++F+GICI+R G GL A F LRNV++ QGVE+ ++LY+P + +IQV+++EKRLDD L Y
Sbjct: 130 ISQFLGICIQRSGRGLGATFILRNVIEGQGVEICFELYNPRVQEIQVVKLEKRLDDSLLY 189
Query: 179 LRDALPEYSTFSFDMDPEILPEGTPVPINPVKVELKPKPWLERWER 42
LRDALPEYSTF +M P + VP+N +KV++KPKPW +RWER
Sbjct: 190 LRDALPEYSTFDVNMKPVVQEPNQKVPVNELKVKMKPKPWSKRWER 235
>UniRef50_Q5DA35 Cluster: SJCHGC06253 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06253 protein - Schistosoma
japonicum (Blood fluke)
Length = 330
Score = 178 bits (434), Expect = 8e-44
Identities = 88/182 (48%), Positives = 120/182 (65%), Gaps = 1/182 (0%)
Frame = -1
Query: 566 DLKKVNPLLENRHAYPEFLP-DPNPKWRNSLREKLERADMLKRRNQIDIPEFYVGSILAV 390
+++ + P E + Y E +P + +P++R+ LRE+LER +M+ RR +DIPEFYVGS++AV
Sbjct: 64 EIQPMEPKEETKRLYQELIPHNIDPRYRDRLRERLERREMMLRRRNLDIPEFYVGSVVAV 123
Query: 389 TIADPHSQGKTNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQVLRV 210
AD + +++RF+GICIER GL FTLRNVV+ VE++Y+LY+PTI I+VL +
Sbjct: 124 KTADKFAPNQSHRFMGICIERFNEGLWTRFTLRNVVEKTAVEIQYELYNPTIQSIEVLLL 183
Query: 209 EKRLDDKLFYLRDALPEYSTFSFDMDPEILPEGTPVPINPVKVELKPKPWLERWERQELQ 30
EKRLD L YLRDA E S F FDM PVPIN KV+L P PW +W +
Sbjct: 184 EKRLDHNLLYLRDAPLEESRFPFDMSRIPYDPSDPVPINDKKVKLLPPPWKFKWYLHGYR 243
Query: 29 GI 24
GI
Sbjct: 244 GI 245
>UniRef50_A7SD84 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 267
Score = 89.8 bits (213), Expect = 5e-17
Identities = 55/126 (43%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Frame = -1
Query: 503 PNPKWRN-SLREKLERADMLKRRNQIDIPEFYVGSILAVTIADPHSQGKTNRFVGICIER 327
P+P+ ++ LE+ D R Q+ +PEF VGS +AVT AD + RFVGICI
Sbjct: 106 PSPEEAGVDIKTFLEQRDCHDRLQQLKVPEFCVGSTVAVTRADNYVPKGHVRFVGICIAM 165
Query: 326 KGCG--LRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRDALPEYS 153
L A FTLRNV+D + +EV + LY P I KI+VL+ E+R L+YLRD P S
Sbjct: 166 NHWQNTLGATFTLRNVIDGEPMEVNFQLYSPVIQKIEVLKHERRDKQALWYLRDYPPALS 225
Query: 152 TFSFDM 135
S M
Sbjct: 226 YVSATM 231
>UniRef50_Q5YBB0 Cluster: 50S ribosomal protein L19; n=1;
Helicosporidium sp. ex Simulium jonesii|Rep: 50S
ribosomal protein L19 - Helicosporidium sp. subsp.
Simulium jonesii (Green alga)
Length = 191
Score = 67.7 bits (158), Expect = 2e-10
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Frame = -1
Query: 470 KLERADMLKRRNQIDIPEFYVGSILAVTIADPHSQGKTNRFVGICIERKGCGLRAEFTLR 291
+LE+ + N IP+F G +L V P ++ + F G+CI ++ +R+ FTLR
Sbjct: 83 ELEKEQVAAALNTRPIPQFKPGDVLEVLTVVPENKRRVTAFRGVCISQRRKAIRSTFTLR 142
Query: 290 NVVDHQG-VEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRDALPE 159
N + G VE + L+ P I +I+V+ K KLFYLR+ P+
Sbjct: 143 NYLGTAGAVERTFPLHSPQIQEIRVVEERKARRAKLFYLRERAPK 187
>UniRef50_Q00VY1 Cluster: 50S ribosomal protein L19; n=2;
Ostreococcus|Rep: 50S ribosomal protein L19 -
Ostreococcus tauri
Length = 156
Score = 67.7 bits (158), Expect = 2e-10
Identities = 38/109 (34%), Positives = 58/109 (53%)
Frame = -1
Query: 479 LREKLERADMLKRRNQIDIPEFYVGSILAVTIADPHSQGKTNRFVGICIERKGCGLRAEF 300
+ E LER M + + I F G ++ +T+ P + KT F GICI ++ G+ + F
Sbjct: 46 MMETLERERMKELAAERVIVPFRPGDVVKLTLEVPENMRKTQTFTGICIAKRHRGMGSSF 105
Query: 299 TLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRDALPEYS 153
TLR+ V + VE + L+ P I +++L K KL+YLRD YS
Sbjct: 106 TLRSAVGNLVVERTFPLFTPNIKGMEILERRKVRRAKLYYLRDKPLRYS 154
>UniRef50_A7PCQ9 Cluster: Chromosome chr17 scaffold_12, whole genome
shotgun sequence; n=2; core eudicotyledons|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 112
Score = 64.9 bits (151), Expect = 1e-09
Identities = 36/101 (35%), Positives = 58/101 (57%)
Frame = -1
Query: 467 LERADMLKRRNQIDIPEFYVGSILAVTIADPHSQGKTNRFVGICIERKGCGLRAEFTLRN 288
L++ + + R + +IPE G I+ + + P ++ +T+ GI I R+ GL F LR
Sbjct: 7 LDKEAVEEVRAKREIPEIKPGYIVQLKVEVPENKRRTSVLKGIVIARRNAGLNTTFRLRR 66
Query: 287 VVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRDAL 165
+V GVE + LY P+I +I+VL +K KL+YLRD +
Sbjct: 67 LVAGVGVESLFPLYSPSIKEIKVLDKKKVRRAKLYYLRDKM 107
>UniRef50_A6GIE4 Cluster: 50S ribosomal protein L19; n=1;
Plesiocystis pacifica SIR-1|Rep: 50S ribosomal protein
L19 - Plesiocystis pacifica SIR-1
Length = 160
Score = 64.5 bits (150), Expect = 2e-09
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = -1
Query: 428 DIPEFYVGSILAV-TIADPHSQGKTNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYD 252
DIPEF G +AV + + + F G+CI RK GLR FT+R V D+ GVE +
Sbjct: 20 DIPEFRPGDTIAVHALISEGGKERIQIFQGVCIHRKSRGLRGSFTVRKVTDNIGVERVWS 79
Query: 251 LYDPTIHKIQVLRVEKRLDDKLFYLRD 171
L P + KI+++ + KL+YLRD
Sbjct: 80 LASPRVTKIELVSRGRVRRAKLYYLRD 106
>UniRef50_Q8RXX5 Cluster: 50S ribosomal protein L19-2, chloroplast
precursor; n=9; core eudicotyledons|Rep: 50S ribosomal
protein L19-2, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 229
Score = 62.5 bits (145), Expect = 8e-09
Identities = 28/93 (30%), Positives = 51/93 (54%)
Frame = -1
Query: 425 IPEFYVGSILAVTIADPHSQGKTNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYDLY 246
+P G I+ + + P ++ + + + GI + R+ G+ +R ++ GVE+ + +Y
Sbjct: 136 VPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIY 195
Query: 245 DPTIHKIQVLRVEKRLDDKLFYLRDALPEYSTF 147
P I +I+V+ K +L+YLRD LP STF
Sbjct: 196 SPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTF 228
>UniRef50_A2X277 Cluster: Ribosomal protein L19; n=2; Oryza
sativa|Rep: Ribosomal protein L19 - Oryza sativa subsp.
indica (Rice)
Length = 222
Score = 61.7 bits (143), Expect = 1e-08
Identities = 33/94 (35%), Positives = 52/94 (55%)
Frame = -1
Query: 446 KRRNQIDIPEFYVGSILAVTIADPHSQGKTNRFVGICIERKGCGLRAEFTLRNVVDHQGV 267
K R + +IP+ G I+ + + P ++ + + GI I R+ G+ F LR +V GV
Sbjct: 124 KVRGEREIPDVQPGCIIQMRLQVPENKRRESTLKGIVIGRRNAGINTTFRLRRLVAGVGV 183
Query: 266 EVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRDAL 165
E + LY P I +I+VL +K KL+YLRD +
Sbjct: 184 ESVFPLYSPNIKEIKVLDRKKVRRAKLYYLRDRM 217
>UniRef50_Q5FGP4 Cluster: 50S ribosomal protein L19; n=13;
Rickettsiales|Rep: 50S ribosomal protein L19 - Ehrlichia
ruminantium (strain Gardel)
Length = 125
Score = 61.7 bits (143), Expect = 1e-08
Identities = 35/104 (33%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Frame = -1
Query: 485 NSLREKLERADMLKRRNQIDIPEFYVGSILAVTIADPHSQG-KTNRFVGICIERKGCGLR 309
N L+E E+ +K + +IP+F G L VT+ S G + F G+CI+++ GL
Sbjct: 3 NLLKEFNEQ--QIKLLSNREIPKFKSGDTLRVTMKIFDSAGERIQTFEGVCIKKRNNGLH 60
Query: 308 AEFTLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYL 177
+ FTLR + ++ ++++ LY PTI I+V++ K KL+Y+
Sbjct: 61 SSFTLRKISYNESIQLQIFLYSPTIESIEVVKFGKVRRAKLYYM 104
>UniRef50_Q9LYF5 Cluster: Ribosomal protein L19; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L19 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 229
Score = 61.3 bits (142), Expect = 2e-08
Identities = 31/90 (34%), Positives = 51/90 (56%)
Frame = -1
Query: 440 RNQIDIPEFYVGSILAVTIADPHSQGKTNRFVGICIERKGCGLRAEFTLRNVVDHQGVEV 261
RN +IPE G I+ + + P ++ + + G+ I R+ GL + F +R +V GVE
Sbjct: 132 RNLREIPEIKPGYIVQLKVEVPENKRRVSIVKGVVIARRNAGLNSTFRIRRLVAGVGVES 191
Query: 260 RYDLYDPTIHKIQVLRVEKRLDDKLFYLRD 171
+ LY P + +I+V+ +K KL+YLRD
Sbjct: 192 MFPLYSPNLREIKVVDKKKVRRAKLYYLRD 221
>UniRef50_Q3A2E9 Cluster: 50S ribosomal protein L19; n=8;
Bacteria|Rep: 50S ribosomal protein L19 - Pelobacter
carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 115
Score = 59.7 bits (138), Expect = 6e-08
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Frame = -1
Query: 467 LERADMLKRRNQIDIPEFYVGSILAVTIADPHSQGKTNR-FVGICIERKGCGLRAEFTLR 291
++R +M + + DIP F G L V + + + F G+CI+R GL + FT+R
Sbjct: 4 IDRLEMEQMKK--DIPAFKAGDTLRVHVKIVEGDKRRIQVFQGVCIKRHNKGLGSTFTVR 61
Query: 290 NVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLR 174
+ D GVE + L+ P I KI+V+ V + KL+YLR
Sbjct: 62 KISDGMGVERVFPLHSPNIDKIEVMMVGRVRRAKLYYLR 100
>UniRef50_Q7MA03 Cluster: 50S ribosomal protein L19; n=23;
Bacteria|Rep: 50S ribosomal protein L19 - Wolinella
succinogenes
Length = 118
Score = 55.6 bits (128), Expect = 9e-07
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Frame = -1
Query: 488 RNSLREKLERADMLKRRNQIDIPEFYVGSILAVTIA-DPHSQGKTNRFVGICIERKGCGL 312
RN E E+A + + +IP+F G L V + + + F GICI +G G
Sbjct: 2 RNRYIESFEKAQIADK----NIPQFKAGDTLRVGVKIQEGDKTRVQNFEGICISVRGTGT 57
Query: 311 RAEFTLRNV-VDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRD 171
FT+R + ++ GVE + LY ++ + +LRV + KL+YLRD
Sbjct: 58 GKTFTIRKMGANNVGVERIFPLYSDSLESVTLLRVGRVRRAKLYYLRD 105
>UniRef50_A5N817 Cluster: 50S ribosomal protein L19; n=10;
Bacteria|Rep: 50S ribosomal protein L19 - Clostridium
kluyveri DSM 555
Length = 115
Score = 55.2 bits (127), Expect = 1e-06
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = -1
Query: 428 DIPEFYVGSILAVTIADPH-SQGKTNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYD 252
D+P F +G + V + ++ + F GI ++R+ G+R FT+R V GVE +
Sbjct: 16 DLPNFNIGDTVKVHVRIKEGNRQRVQVFEGIVLKRQNGGVRETFTVRRVAYGVGVERTFP 75
Query: 251 LYDPTIHKIQVLRVEKRLDDKLFYLRD 171
+ P I KIQV+R K KL+YLRD
Sbjct: 76 VNAPIIEKIQVVRRGKVRRAKLYYLRD 102
>UniRef50_P58167 Cluster: 50S ribosomal protein L19; n=83;
Proteobacteria|Rep: 50S ribosomal protein L19 -
Caulobacter crescentus (Caulobacter vibrioides)
Length = 131
Score = 54.8 bits (126), Expect = 2e-06
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Frame = -1
Query: 473 EKLERADMLKRRNQIDIPEFYVGSILAVTIADPHSQG-KTNRFVGICIERKGCGLRAEFT 297
E+ E A +L R IP+F G L V + + + + G+CI R G G+ FT
Sbjct: 10 EQEESARLLAARA---IPDFRPGDTLRVNVKIKEGERERVQAYEGVCIARAGTGVHESFT 66
Query: 296 LRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRD 171
+R + +GVE + L P+I I+V R KL+YLRD
Sbjct: 67 VRKISFGEGVERLFPLLSPSIESIEVKRRGVVRRAKLYYLRD 108
>UniRef50_Q9X1Q7 Cluster: 50S ribosomal protein L19; n=15;
Bacteria|Rep: 50S ribosomal protein L19 - Thermotoga
maritima
Length = 115
Score = 54.4 bits (125), Expect = 2e-06
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Frame = -1
Query: 446 KRRNQIDIPEFYVGSILAVTI-ADPHSQGKTNRFVGICIERKGCGLRAEFTLRNVVDHQ- 273
K+ + +IP+F G + V + + +T F GI I ++G G+ FT+R + H
Sbjct: 10 KKYEKKEIPDFRPGDTVRVHVKVIEGDRERTQVFEGIVIAKRGSGINKTFTVRRIGSHGV 69
Query: 272 GVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRD 171
GVE + ++ P + KI+V+R K KL+YLR+
Sbjct: 70 GVERIFPVHSPVVEKIEVVRKGKVRRAKLYYLRN 103
>UniRef50_Q74FG1 Cluster: 50S ribosomal protein L19; n=55;
Bacteria|Rep: 50S ribosomal protein L19 - Geobacter
sulfurreducens
Length = 118
Score = 53.2 bits (122), Expect = 5e-06
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = -1
Query: 428 DIPEFYVGSILAVTIADPHS-QGKTNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYD 252
+IP F G L V + + + F G+CI R+ G+R FT+R + ++ GVE +
Sbjct: 15 NIPPFKPGDTLKVHVKIVEGDKSRIQAFQGVCISRQNGGIRESFTVRKISNNIGVERVFP 74
Query: 251 LYDPTIHKIQVLRVEKRLDDKLFYLR 174
L+ PT+ I+V+ KL+YLR
Sbjct: 75 LHSPTVDAIEVITRGHVRRAKLYYLR 100
>UniRef50_Q5LNE8 Cluster: 50S ribosomal protein L19; n=47;
Bacteria|Rep: 50S ribosomal protein L19 - Silicibacter
pomeroyi
Length = 127
Score = 52.8 bits (121), Expect = 6e-06
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = -1
Query: 428 DIPEFYVGSILAVTI-ADPHSQGKTNRFVGICIERK-GCGLRAEFTLRNVVDHQGVEVRY 255
DIP+F G + V ++ + + G+CI RK G G+ FT+R + +GVE +
Sbjct: 18 DIPDFKAGDTIRVGYKVTEGTRSRVQNYEGVCISRKNGSGIAGSFTVRKISFGEGVERVF 77
Query: 254 DLYDPTIHKIQVLRVEKRLDDKLFYLR 174
LY I I V+R + KL+YLR
Sbjct: 78 PLYSTNIDSITVVRRGRVRRAKLYYLR 104
>UniRef50_Q2GCN5 Cluster: 50S ribosomal protein L19; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 50S ribosomal
protein L19 - Neorickettsia sennetsu (strain Miyayama)
Length = 120
Score = 52.4 bits (120), Expect = 8e-06
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = -1
Query: 422 PEFYVGSILAVTIADPHSQGKTNRFVGICIERKGCGLRAEFTLRNVVDHQ-GVEVRYDLY 246
PEF G ++V + G+T F G+CI + G+ + FTLR + H VE + LY
Sbjct: 22 PEFRAGYTMSVEFYVQGTSGRTQVFKGLCIGKSNKGVHSSFTLRKLSVHDVYVERTFRLY 81
Query: 245 DPTIHKIQVLRVEKRLDDKLFYLR 174
P+I I V R K KL+Y+R
Sbjct: 82 WPSIKSISVEREGKVRRAKLYYIR 105
>UniRef50_P58168 Cluster: 50S ribosomal protein L19; n=40;
Bacteria|Rep: 50S ribosomal protein L19 - Rhizobium loti
(Mesorhizobium loti)
Length = 181
Score = 52.4 bits (120), Expect = 8e-06
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Frame = -1
Query: 470 KLERADMLKRRNQIDIPEFYVGSILAVTI-ADPHSQGKTNRFVGICIERKGCGLRAEFTL 294
+LE K + +PEF G + V + ++ + + G+ I R G G + FT+
Sbjct: 6 QLEAEQAAKIEAKRKLPEFQPGDTVRVQVRVTEGTRTRVQAYEGVVIARAGSGFQENFTV 65
Query: 293 RNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRD 171
R + +GVE + ++ P + ++++R K KL+YLRD
Sbjct: 66 RKISYGEGVERVFPVFSPMVEGVEIVRRGKVRRAKLYYLRD 106
>UniRef50_Q1G9L7 Cluster: 50S ribosomal protein L19; n=19;
Bacteria|Rep: 50S ribosomal protein L19 - Lactobacillus
delbrueckii subsp. bulgaricus (strain ATCC 11842 /
DSM20081)
Length = 115
Score = 52.4 bits (120), Expect = 8e-06
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Frame = -1
Query: 455 DMLKRRNQIDIPEFYVGSILAVTIADPH-SQGKTNRFVGICIERKGCGLRAEFTLRNVVD 279
++ K + + D+PEF G + V + + + F G+ I+++G G+ A +T+R +
Sbjct: 7 ELTKEQLRDDMPEFRAGDTVRVHVRVVEGTHERIQIFEGVVIKKRGTGIGATYTVRKIAS 66
Query: 278 HQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLR 174
GVE + + P + K++V+R + KL+YLR
Sbjct: 67 GVGVERTFPVNTPRVAKVEVIRHGRVRRAKLYYLR 101
>UniRef50_Q833P5 Cluster: 50S ribosomal protein L19; n=9;
Bacteria|Rep: 50S ribosomal protein L19 - Enterococcus
faecalis (Streptococcus faecalis)
Length = 115
Score = 52.0 bits (119), Expect = 1e-05
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Frame = -1
Query: 455 DMLKRRNQIDIPEFYVGSILAVTIADPH-SQGKTNRFVGICIERKGCGLRAEFTLRNVVD 279
++ + + + DIP F G + V ++ + F G+ I+R+G G+ +T+R V +
Sbjct: 7 ELTQEQLRTDIPAFRPGDTVRVHAKVVEGTRERIQLFEGVVIKRRGAGISETYTVRKVSN 66
Query: 278 HQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLR 174
GVE + L+ P + +I+V+R K KL+YLR
Sbjct: 67 GVGVERTFPLHTPRVAQIEVVRYGKVRRAKLYYLR 101
>UniRef50_Q2J700 Cluster: 50S ribosomal protein L19; n=10;
Bacteria|Rep: 50S ribosomal protein L19 - Frankia sp.
(strain CcI3)
Length = 118
Score = 51.6 bits (118), Expect = 1e-05
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = -1
Query: 428 DIPEFYVGSILAVTIADPH-SQGKTNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYD 252
D+PEF+ G L V + ++ + F G I R+G G+R FT+R V GVE +
Sbjct: 15 DVPEFWPGDTLKVHVRVVEGNRQRIQVFQGAVIRRQGGGVRETFTVRKVSFGVGVERTFP 74
Query: 251 LYDPTIHKIQVLRVEKRLDDKLFYLR 174
L+ P + KI+++ KL+YLR
Sbjct: 75 LHSPIVSKIEIVSRGDVRRAKLYYLR 100
>UniRef50_Q6AEA5 Cluster: 50S ribosomal protein L19; n=14;
Bacteria|Rep: 50S ribosomal protein L19 - Leifsonia xyli
subsp. xyli
Length = 115
Score = 51.2 bits (117), Expect = 2e-05
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = -1
Query: 428 DIPEFYVGSILAVTI-ADPHSQGKTNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYD 252
DIP F G + V + S+ + F G+ I R G G+R FT+R + GVE +
Sbjct: 15 DIPAFRAGDTVKVHVNIIEGSRSRVQVFQGVVIARSGEGVRETFTVRKISFQVGVERMFP 74
Query: 251 LYDPTIHKIQVLRVEKRLDDKLFYLRD 171
++ P I KI+V+ KL+YLR+
Sbjct: 75 VHSPVIDKIEVVTRGDVRRAKLYYLRE 101
>UniRef50_Q9PPJ3 Cluster: 50S ribosomal protein L19; n=29;
Bacteria|Rep: 50S ribosomal protein L19 - Campylobacter
jejuni
Length = 118
Score = 51.2 bits (117), Expect = 2e-05
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Frame = -1
Query: 428 DIPEFYVGSILAVTIADPHS-QGKTNRFVGICIERKGCGLRAEFTLRNV-VDHQGVEVRY 255
++P+F G L + I + + F GICI R+G G+ F +R + ++ GVE +
Sbjct: 18 NVPDFRAGDTLKLAIRIKEGDKTRIQNFEGICIARRGNGVSETFIVRKIGANNVGVERIF 77
Query: 254 DLYDPTIHKIQVLRVEKRLDDKLFYLRD 171
+Y ++ I VLR + +LFYLRD
Sbjct: 78 PIYSESLESITVLRRGRVRRARLFYLRD 105
>UniRef50_Q7VDB0 Cluster: 50S ribosomal protein L19; n=35; cellular
organisms|Rep: 50S ribosomal protein L19 -
Prochlorococcus marinus
Length = 160
Score = 50.8 bits (116), Expect = 3e-05
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 4/142 (2%)
Frame = -1
Query: 584 LRRLGVDLKKVNPLLENRHAYPEFLPDPNPK---WRNSLREKLERADMLKRRNQIDIPEF 414
L+ ++ N + E+ A P+ + PK + L + A K + + +PE
Sbjct: 5 LKNTSPSKEESNEIEESSKATPKATRETKPKDSPSKTKLSAQALIAQFEKSQQKKKVPEV 64
Query: 413 YVGSILAVTIA-DPHSQGKTNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYDLYDPT 237
YVG + V + ++ + + G+ I ++ GL T+R + GVE + ++ P
Sbjct: 65 YVGDTVRVGVRISEGNKERVQPYEGVIIAKRHGGLNQTITVRRIFQGVGVERVFMVHSPQ 124
Query: 236 IHKIQVLRVEKRLDDKLFYLRD 171
+ I+V R K KLFYLRD
Sbjct: 125 VASIKVERRGKVRRAKLFYLRD 146
>UniRef50_Q8EWU9 Cluster: 50S ribosomal protein L19; n=29;
Bacteria|Rep: 50S ribosomal protein L19 - Mycoplasma
penetrans
Length = 145
Score = 50.4 bits (115), Expect = 3e-05
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = -1
Query: 428 DIPEFYVGSILAV-TIADPHSQGKTNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYD 252
DIPEF G + V +++ + +F G+ I R+G GL +R GVE +
Sbjct: 23 DIPEFRSGDTIIVHNKIIENNKSRIQKFEGVVIRRRGSGLSETIIVRKESSGIGVERIFQ 82
Query: 251 LYDPTIHKIQVLRVEKRLDDKLFYLRD 171
L+ P I KI+V+R+ K L YLR+
Sbjct: 83 LHSPQIEKIEVIRLGKVRRAYLTYLRE 109
>UniRef50_Q6KHL6 Cluster: 50S ribosomal protein L19; n=12;
Bacteria|Rep: 50S ribosomal protein L19 - Mycoplasma
mobile
Length = 116
Score = 49.6 bits (113), Expect = 6e-05
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = -1
Query: 428 DIPEFYVGSILAVTIADPH-SQGKTNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYD 252
D+PEF G + V + ++ + F G+ I K FT+R + + GVE +
Sbjct: 17 DLPEFKSGDNIKVLVRIKEGAKERIQAFEGLVIAIKNYSTHKTFTVRKISNSVGVERTFP 76
Query: 251 LYDPTIHKIQVLRVEKRLDDKLFYLRD 171
L P I I+VLR K KL+Y+RD
Sbjct: 77 LNSPVIVSIEVLRKNKVRRSKLYYMRD 103
>UniRef50_A6BZ40 Cluster: 50S ribosomal protein L19; n=1;
Planctomyces maris DSM 8797|Rep: 50S ribosomal protein
L19 - Planctomyces maris DSM 8797
Length = 123
Score = 49.2 bits (112), Expect = 8e-05
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = -1
Query: 419 EFYVGSILAV-TIADPHSQGKTNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYDLYD 243
+F +G + V T + + F G+ I R+G G R FT+R +V +GVE + +
Sbjct: 19 QFEIGDTVDVHTRIQEGDKERIQIFSGVIIARRGGGTRENFTVRRIVAGEGVERIFPVNS 78
Query: 242 PTIHKIQVLRVEKRLDDKLFYLRD 171
P I K+++ R + KL+YLRD
Sbjct: 79 PKIAKLEIKRHGRVRRAKLYYLRD 102
>UniRef50_Q2JHW3 Cluster: 50S ribosomal protein L19; n=6; cellular
organisms|Rep: 50S ribosomal protein L19 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 125
Score = 48.8 bits (111), Expect = 1e-04
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = -1
Query: 428 DIPEFYVGSILAVTIA-DPHSQGKTNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYD 252
D+PE VG + V + + + F G I + G+ T+R V GVE +
Sbjct: 22 DLPEIRVGDQVRVGVRIQEGGKERVQAFEGTVIAMRHSGINRTITVRKVFQGIGVERVFL 81
Query: 251 LYDPTIHKIQVLRVEKRLDDKLFYLRD 171
++ P I IQVLR K KLFYLRD
Sbjct: 82 IHSPRIESIQVLRRGKVRRAKLFYLRD 108
>UniRef50_Q8YLK1 Cluster: 50S ribosomal protein L19; n=14; cellular
organisms|Rep: 50S ribosomal protein L19 - Anabaena sp.
(strain PCC 7120)
Length = 120
Score = 48.8 bits (111), Expect = 1e-04
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = -1
Query: 428 DIPEFYVGSILAVTIADPHSQG-KTNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYD 252
++PE Y+G + V + + + + G+ I R+ G+ T+R V GVE +
Sbjct: 18 NLPEIYIGDTVRVGVKIKEGEKYRVQPYEGVVIARRNGGINETITVRRVFQGVGVERVFL 77
Query: 251 LYDPTIHKIQVLRVEKRLDDKLFYLR 174
L+ P I I+VLR K KL+YLR
Sbjct: 78 LHSPRIDNIKVLRRGKVRRAKLYYLR 103
>UniRef50_Q4U9Y3 Cluster: Ribosomal protein L19; n=3;
Piroplasmida|Rep: Ribosomal protein L19 - Theileria
annulata
Length = 360
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/81 (27%), Positives = 43/81 (53%)
Frame = -1
Query: 455 DMLKRRNQIDIPEFYVGSILAVTIADPHSQGKTNRFVGICIERKGCGLRAEFTLRNVVDH 276
+ L++ + ++PE +G ++ V +Q F G C++ + GL + F+L+N D
Sbjct: 127 ERLEKMRKFNMPELNLGELVEVKYELSRTQQTFAVFTGYCVDIRNRGLNSSFSLKNAFDG 186
Query: 275 QGVEVRYDLYDPTIHKIQVLR 213
GV + LY P I ++V++
Sbjct: 187 VGVTQLFPLYSPRILNVKVVK 207
>UniRef50_Q9PH36 Cluster: 50S ribosomal protein L19; n=24;
Proteobacteria|Rep: 50S ribosomal protein L19 - Xylella
fastidiosa
Length = 136
Score = 47.2 bits (107), Expect = 3e-04
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = -1
Query: 425 IPEFYVGSILAVTI-ADPHSQGKTNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYDL 249
+P+F G + V + ++ + + G+ I K GL + FT+R + GVE +
Sbjct: 21 VPQFSQGDTIVVNVKVKEGNRERLQAYEGVVIATKNAGLNSAFTVRKISHGYGVERVFQT 80
Query: 248 YDPTIHKIQVLRVEKRLDDKLFYLR 174
+ P I I++ R K KL+YLR
Sbjct: 81 HSPIIESIEIKRRGKVRAAKLYYLR 105
>UniRef50_Q4UNA7 Cluster: 50S ribosomal protein L19; n=58;
Bacteria|Rep: 50S ribosomal protein L19 - Rickettsia
felis (Rickettsia azadi)
Length = 138
Score = 46.8 bits (106), Expect = 4e-04
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Frame = -1
Query: 473 EKLERADMLKRRNQIDIPEFYVGSILAVTIA----DPHSQGK---TNRFV---GICIERK 324
+ E+ ++ K IP+F G + VT+ GK T RF G+ I ++
Sbjct: 5 DHFEQENISKLTANKKIPDFEAGDTVKVTVKIIDRSIEKDGKEKLTERFQAYEGVVIAKR 64
Query: 323 GCGLRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLR 174
G+ + F +R + +GVE R+ Y P +H I V++ KL+YLR
Sbjct: 65 NRGITSSFLVRKISHGEGVERRFMTYSPIVHSIDVVKYGVVRRAKLYYLR 114
>UniRef50_O67767 Cluster: 50S ribosomal protein L19; n=6;
Bacteria|Rep: 50S ribosomal protein L19 - Aquifex
aeolicus
Length = 154
Score = 46.8 bits (106), Expect = 4e-04
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = -1
Query: 485 NSLREKLERADMLKRRNQIDIPEFYVGSILAVTIADPHS-QGKTNRFVGICIERKGCGLR 309
+ L K+E+ + K+ + P+F VG + V + + F G+ I +G G
Sbjct: 3 SELLRKIEQKYLPKK----EYPDFRVGYTVRVYYKIKEGDKERIQPFEGVVIRIRGSGAG 58
Query: 308 AEFTLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRD 171
FT+R G+E + Y P I KI+V+++ K KL+YLR+
Sbjct: 59 KTFTVRRESFGVGIERTFPYYSPNIEKIEVVKIGKVRRAKLYYLRE 104
>UniRef50_Q55IQ2 Cluster: Ribosomal protein L19; n=2; Filobasidiella
neoformans|Rep: Ribosomal protein L19 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 195
Score = 46.0 bits (104), Expect = 7e-04
Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Frame = -1
Query: 458 ADMLKRRNQIDIPEFYVGSILAV-TIADPHSQGKTNRFVGICIERKGCGLRAEFTLRNVV 282
A + RR++ +P GS+L V T +DP ++ + F G+ + K G+ F LRN+V
Sbjct: 69 AHLFARRSKDRLP---AGSVLTVITYSDP-AKKSISPFSGVLMGTKRRGVDTCFRLRNIV 124
Query: 281 DHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRDALPEY 156
+ GVE+ + L P I +I+V++ ++ +L L+ A Y
Sbjct: 125 NKAGVEMTFKLNSPMIKEIKVVKRAEKAKGQLKDLKRAKVNY 166
>UniRef50_Q9G875 Cluster: Ribosomal protein L19; n=1; Malawimonas
jakobiformis|Rep: Ribosomal protein L19 - Malawimonas
jakobiformis
Length = 92
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/76 (26%), Positives = 42/76 (55%)
Frame = -1
Query: 446 KRRNQIDIPEFYVGSILAVTIADPHSQGKTNRFVGICIERKGCGLRAEFTLRNVVDHQGV 267
++++ + +G+ +++ I + F+G+CI++K G R+ FTL+N++D+ V
Sbjct: 16 QKKSNLKTSSLKIGNTVSIRIILSKKLKRKQVFMGVCIKKKNKGFRSTFTLKNIIDNVTV 75
Query: 266 EVRYDLYDPTIHKIQV 219
+ LY I +I V
Sbjct: 76 IKTFPLYSSMITEILV 91
>UniRef50_P66081 Cluster: 50S ribosomal protein L19; n=19;
Mycobacterium|Rep: 50S ribosomal protein L19 -
Mycobacterium bovis
Length = 113
Score = 44.8 bits (101), Expect = 0.002
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = -1
Query: 428 DIPEFYVGSILAVTI-ADPHSQGKTNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYD 252
DIP F G + V + ++ + F G+ I R+G G+R FT+R GVE +
Sbjct: 15 DIPAFNPGDTINVHVKVIEGAKERLQVFKGVVIRRQGGGIRETFTVRKESYGVGVERTFP 74
Query: 251 LYDPTIHKIQVLRVEKRLDDKLFYLRD 171
++ P I I+V+ KL+YLR+
Sbjct: 75 VHSPNIDHIEVVTRGDVRRAKLYYLRE 101
>UniRef50_Q9RWB4 Cluster: 50S ribosomal protein L19; n=16;
Bacteria|Rep: 50S ribosomal protein L19 - Deinococcus
radiodurans
Length = 166
Score = 44.8 bits (101), Expect = 0.002
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Frame = -1
Query: 470 KLERADMLKRRNQI---DIPEFYVGSILAV-TIADPHSQGKTNRFVGICIERKGCGLRAE 303
K+ R ++L+ Q +P+F G + V T ++ ++ F G+ I G G R
Sbjct: 6 KINRGELLRGIEQDHTRQLPDFRPGDTVRVDTKVREGNRTRSQAFEGVVIAINGSGSRKS 65
Query: 302 FTLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRD 171
FT+R + +GVE + P ++++ ++ K KL+YLR+
Sbjct: 66 FTVRKISFGEGVERVFPFASPLVNQVTIVERGKVRRAKLYYLRE 109
>UniRef50_Q4P0G9 Cluster: Ribosomal protein L19; n=1; Ustilago
maydis|Rep: Ribosomal protein L19 - Ustilago maydis
(Smut fungus)
Length = 258
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = -1
Query: 407 GSILAVTIADPHSQGKTNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYDLYDPTIHK 228
GS+L V + + F G+ I + G+ F LRN+V GVE+R++LY P +
Sbjct: 134 GSVLIVESWTSPLKTNFSSFSGVLIAVRRRGVSTSFVLRNLVQKLGVEMRFNLYSPLLKD 193
Query: 227 IQVL-RVEKRLDDKLFYLR 174
++V+ + E +DK LR
Sbjct: 194 VRVIQKAEAGKNDKSGKLR 212
>UniRef50_Q87LT1 Cluster: 50S ribosomal protein L19; n=67;
Gammaproteobacteria|Rep: 50S ribosomal protein L19 -
Vibrio parahaemolyticus
Length = 117
Score = 44.0 bits (99), Expect = 0.003
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = -1
Query: 425 IPEFYVGSILAVTI-ADPHSQGKTNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYDL 249
+P+F G + V + + + F G+ I + GL + FT+R + + +GVE +
Sbjct: 17 LPKFAPGDTVVVQVKVKEGDRERLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERTFQT 76
Query: 248 YDPTIHKIQVLRVEKRLDDKLFYLRD 171
+ P + I+V R KL+YLR+
Sbjct: 77 HSPIVDSIEVKRRGAVRRAKLYYLRE 102
>UniRef50_P36239 Cluster: 50S ribosomal protein L19; n=4; cellular
organisms|Rep: 50S ribosomal protein L19 - Synechocystis
sp. (strain PCC 6803)
Length = 122
Score = 44.0 bits (99), Expect = 0.003
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = -1
Query: 428 DIPEFYVGSILAVTIADPHS-QGKTNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYD 252
D+P +VG + V + + + + G I ++ G+ T+R + GVE +
Sbjct: 20 DLPTIHVGDTIKVGVKIVEGGKERIQPYEGTVIAKRNGGISETITVRKIFQGVGVERVFL 79
Query: 251 LYDPTIHKIQVLRVEKRLDDKLFYLRD 171
L+ P + I+VLR K KL+YLRD
Sbjct: 80 LHSPRVASIKVLRRGKVRRAKLYYLRD 106
>UniRef50_Q72JU9 Cluster: 50S ribosomal protein L19; n=2; Thermus
thermophilus|Rep: 50S ribosomal protein L19 - Thermus
thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Length = 146
Score = 43.2 bits (97), Expect = 0.005
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = -1
Query: 428 DIPEFYVGSILAVTI-ADPHSQGKTNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYD 252
D+PEF G + V+ ++ + F GI I + G FT+R V GVE +
Sbjct: 18 DLPEFRPGDTVRVSYKVKEGNRTRIQDFEGIVIRIRRNGFNTTFTVRKVSYGVGVERIFP 77
Query: 251 LYDPTIHKIQVLRVEKRLDDKLFYLRD 171
L+ P I KI +++ + KL+++R+
Sbjct: 78 LHSPLIQKIDIVQRGRARRAKLYFIRN 104
>UniRef50_Q4A881 Cluster: 50S ribosomal protein L19; n=5;
Mycoplasma|Rep: 50S ribosomal protein L19 - Mycoplasma
hyopneumoniae (strain 7448)
Length = 121
Score = 42.7 bits (96), Expect = 0.007
Identities = 20/59 (33%), Positives = 35/59 (59%)
Frame = -1
Query: 350 FVGICIERKGCGLRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLR 174
F G+ I+ K GL + F +R + + GVE + L+ P + K++V+R K KL+Y++
Sbjct: 43 FEGLVIKFKKNGLSSNFVVRKISHNVGVERTFLLHSPLVDKVEVIRSNKVRRAKLYYMK 101
>UniRef50_O83879 Cluster: 50S ribosomal protein L19; n=7;
Bacteria|Rep: 50S ribosomal protein L19 - Treponema
pallidum
Length = 123
Score = 42.3 bits (95), Expect = 0.009
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = -1
Query: 368 QGKTNR---FVGICIERKGCGLRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRL 198
+GKT R + G+ + K G+R FT+R GVE + L+ P I ++ V+R K
Sbjct: 35 EGKTERIQAYEGLVLCFKNSGVRRTFTVRKNSYGVGVERIFPLHSPRIERVDVVRAGKVR 94
Query: 197 DDKLFYLRDAL 165
KL+Y+R+ +
Sbjct: 95 RAKLYYIREKI 105
>UniRef50_Q8KD91 Cluster: 50S ribosomal protein L19; n=10;
Chlorobiaceae|Rep: 50S ribosomal protein L19 -
Chlorobium tepidum
Length = 121
Score = 42.3 bits (95), Expect = 0.009
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Frame = -1
Query: 467 LERADMLKRRNQIDIPEFYVGSILAVTIADPHSQG-KTNRFVGICIERKGCGLRAEFTLR 291
++ + ++RN DIPE G + + + + + F G+ I KG G T+R
Sbjct: 5 IQLVEATQQRN--DIPEVRPGDTVRIQLKVIEGEKERLQAFEGVVIGDKGMGASKTITVR 62
Query: 290 NVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLR 174
+ GVE + P I + V+R K KLFYLR
Sbjct: 63 KISHGVGVERIIPVNSPNIESVTVVRSGKARRAKLFYLR 101
>UniRef50_Q9UT87 Cluster: Mitochondrial ribosomal protein subunit
L19; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit L19 - Schizosaccharomyces
pombe (Fission yeast)
Length = 182
Score = 41.9 bits (94), Expect = 0.012
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 7/117 (5%)
Frame = -1
Query: 542 LENRHAYPEFLPDPNPKWRNSLREKL------ERADMLKRRNQIDIPEFYVGSILAVTIA 381
L+ + +P+ +P P K SL EK E+++ K ++ G++L V
Sbjct: 25 LKRPYNFPKPVPGPKHKDVLSLFEKKCRSVLDEQSERFKMFHRSQPNRVRPGAVLLVESY 84
Query: 380 DPH-SQGKTNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQVLR 213
+ S+ NRF G + + G ++ LRNVV GVE +Y P I +I VL+
Sbjct: 85 SKYPSKDSVNRFAGYLLRIRHRGPKSSILLRNVVMGVGVEYLLPIYSPQIKRIVVLK 141
>UniRef50_Q1DSW0 Cluster: Ribosomal protein L19; n=1; Coccidioides
immitis|Rep: Ribosomal protein L19 - Coccidioides
immitis
Length = 225
Score = 41.5 bits (93), Expect = 0.016
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = -1
Query: 464 ERADMLKRRNQIDIPEFYVGSILAVTIADPHSQGKTNRFVGICIERKGCGLRAEFTLRNV 285
ER ++ +RN+ VG IL VT + F G+C+ + G+ F LRN
Sbjct: 102 ERQNLFNKRNRQGAK---VGDILRVTFKSG------DPFAGVCLNIRQRGIDTAFLLRNQ 152
Query: 284 VDHQGVEVRYDLYDPTIHKIQVL-RVEKR-LDDKLFYLRDALPEYST 150
+ G E+ +Y+P + ++++ R EKR +L Y+R ++ T
Sbjct: 153 LTRVGCEMWIKVYNPQVQAVEIVQRSEKRKRRARLTYMRQTKHDFGT 199
>UniRef50_Q4WUS4 Cluster: Ribosomal protein L19; n=5;
Trichocomaceae|Rep: Ribosomal protein L19 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 246
Score = 40.7 bits (91), Expect = 0.028
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = -1
Query: 410 VGSILAVTIADPHSQGKTNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYDLYDPTIH 231
VG IL VT + + F G+C+ + G+ F LRN + GVE+ ++ P +
Sbjct: 119 VGDILRVTFKNG------DPFSGVCLSIRLRGIDTSFLLRNELTRVGVEMAVKVFSPNVE 172
Query: 230 KIQVL-RVEKR-LDDKLFYLR 174
++++ R EKR +L+Y+R
Sbjct: 173 SVEIVQRTEKRKRRARLYYMR 193
>UniRef50_Q7RYW8 Cluster: Ribosomal protein L19; n=2;
Sordariales|Rep: Ribosomal protein L19 - Neurospora
crassa
Length = 258
Score = 40.3 bits (90), Expect = 0.037
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = -1
Query: 410 VGSILAVTIADPHSQGKTNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYDLYDPTIH 231
VG +L VT H +G F G+C+ + G+ LRN + GVE+ Y +Y+ +
Sbjct: 135 VGDVLMVT----HRRGG-EPFAGVCLAIRRSGIDTAILLRNHLGKVGVEMWYKIYNKNVA 189
Query: 230 KIQVL--RVEKRLDDKLFYLR 174
I+++ R ++ KL Y+R
Sbjct: 190 GIEIIKRRAKRARRAKLMYMR 210
>UniRef50_Q6ML99 Cluster: 50S ribosomal protein L19; n=7;
Bacteria|Rep: 50S ribosomal protein L19 - Bdellovibrio
bacteriovorus
Length = 123
Score = 39.5 bits (88), Expect = 0.064
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Frame = -1
Query: 467 LERADMLKRRNQIDIPEFYVGSILAVTIADPHSQG-KTNRFVGICIERKGCGLRAEFTLR 291
L R +K N+ +I F G + V + + + + GI + +G G FT+R
Sbjct: 7 LVRRVSVKAANK-NIQSFNSGDTVNVFVKVKEGEKERVQLYKGIVTKIQGSGAAKSFTVR 65
Query: 290 NVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLR 174
+ GVE + P + K++++ V K KL+YLR
Sbjct: 66 KMSAGVGVERTFPFASPALDKVEIVNVGKVRRSKLYYLR 104
>UniRef50_A6RRM0 Cluster: Ribosomal protein L19; n=1; Botryotinia
fuckeliana B05.10|Rep: Ribosomal protein L19 -
Botryotinia fuckeliana B05.10
Length = 233
Score = 39.1 bits (87), Expect = 0.085
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = -1
Query: 350 FVGICIERKGCGLRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQVL--RVEKRLDDKLFYL 177
F G+CI + G+ LRN + GVE+ Y +Y P + I+V+ + ++ +L Y+
Sbjct: 131 FAGVCINIRRRGVETGILLRNELTRVGVEMWYKIYSPNVEGIEVVQRKAKRARRARLTYM 190
Query: 176 R 174
R
Sbjct: 191 R 191
>UniRef50_A6YG73 Cluster: Ribosomal protein L19; n=1; Leptosira
terrestris|Rep: Ribosomal protein L19 - Leptosira
terrestris (Pleurastrum terrestre)
Length = 183
Score = 38.7 bits (86), Expect = 0.11
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = -1
Query: 350 FVGICIERKGCGLRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRD 171
+ G+ I K G+ T+R + GVE ++L P+++KI +L+ KL+YLR+
Sbjct: 112 YSGVVIAIKNKGINKNITVRRLFQGIGVERVFNLVSPSVNKIHILKRASVRRAKLYYLRN 171
>UniRef50_Q9TKZ4 Cluster: Chloroplast 50S ribosomal protein L19;
n=2; Nephroselmis olivacea|Rep: Chloroplast 50S
ribosomal protein L19 - Nephroselmis olivacea
Length = 137
Score = 38.7 bits (86), Expect = 0.11
Identities = 26/109 (23%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Frame = -1
Query: 476 REKLERADMLKRRNQIDIPEFYVGSILAVTIADPHS-QGKTNRFVGICIERKGCGLRAEF 300
+E E+ + ++ R +P VG ++ V + + + + G I + GL +
Sbjct: 3 KEDKEKKEKIEYR---PLPAIAVGDLVKVGLLILEGDKERVQTYEGTVISKHRAGLNSTI 59
Query: 299 TLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRDALPEYS 153
T+R G+E + LY P + ++ +R K KL+YLR+ + + S
Sbjct: 60 TVRKTFQGVGIERVFCLYSPRMVFVEFIRHSKARRAKLYYLRNRVGKQS 108
>UniRef50_Q4YAR9 Cluster: Ribosomal protein L19-like protein,
putative; n=5; Plasmodium|Rep: Ribosomal protein
L19-like protein, putative - Plasmodium berghei
Length = 340
Score = 38.3 bits (85), Expect = 0.15
Identities = 23/85 (27%), Positives = 40/85 (47%)
Frame = -1
Query: 467 LERADMLKRRNQIDIPEFYVGSILAVTIADPHSQGKTNRFVGICIERKGCGLRAEFTLRN 288
+E M K RN +P+ + G ++ + SQ F G C++ + L + F ++N
Sbjct: 104 VEMNKMNKLRN-FKMPKIHTGDLIEIKYELSRSQQTFAIFQGYCVDIRRKRLDSSFIVKN 162
Query: 287 VVDHQGVEVRYDLYDPTIHKIQVLR 213
+ D GVE Y P I ++ +R
Sbjct: 163 IFDGVGVEQLIPFYSPRILYVKNIR 187
>UniRef50_Q5L0P3 Cluster: 50S ribosomal protein L19; n=7;
Bacteria|Rep: 50S ribosomal protein L19 - Geobacillus
kaustophilus
Length = 120
Score = 37.9 bits (84), Expect = 0.20
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = -1
Query: 455 DMLKRRNQIDIPEFYVGSILAVTIADPH-SQGKTNRFVGICIERKGCGLRAEFT-LRNVV 282
++ K + + D+P+F G + V + ++ + F G+ I+R+G G+ ++V+
Sbjct: 8 EITKEQLRTDLPDFRPGDTVRVHVKVVEGNRERIQVFEGVVIKRRGAGISENVHGPQSVL 67
Query: 281 DHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRD 171
+ ++ P I K++V+R K KL+YLR+
Sbjct: 68 WRPALSAHSRVHTPKIAKLEVIRRGKVRRAKLYYLRE 104
>UniRef50_Q2IJ55 Cluster: 50S ribosomal protein L19; n=4;
Cystobacterineae|Rep: 50S ribosomal protein L19 -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 131
Score = 37.9 bits (84), Expect = 0.20
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = -1
Query: 458 ADMLKRRNQIDIPEFYVGSILAV-TIADPHSQGKTNRFVGICIE-RKGCGLRAEFTLRNV 285
AD+ + + D+PE G + V T + + F G+ I RKG + FT+R V
Sbjct: 7 ADIEAKYLRTDLPEMRAGDSVRVHTKIKEGDKERIQVFEGVVIAYRKGAPGSSMFTVRKV 66
Query: 284 VDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRD 171
GVE + ++ P I KI+V+ +L++LR+
Sbjct: 67 SYGVGVERMFPVHSPRIDKIEVVGHGGVRRSRLYFLRN 104
>UniRef50_Q2GRM9 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized protein
- Chaetomium globosum (Soil fungus)
Length = 1167
Score = 37.5 bits (83), Expect = 0.26
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = -1
Query: 326 KGCGLRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDK---LFYLRDALPEY 156
+G +R LR +D QG V +D +P K +V++ K +F+L +A PEY
Sbjct: 876 QGLLIRVNRGLRIAMDFQGETVHFDATNPAARKYVWEKVKQNYYSKGIKVFWLDEAEPEY 935
Query: 155 STFSFD 138
S + FD
Sbjct: 936 SAYDFD 941
>UniRef50_Q5L5L9 Cluster: 50S ribosomal protein L19; n=23;
Bacteria|Rep: 50S ribosomal protein L19 - Chlamydophila
abortus
Length = 122
Score = 37.5 bits (83), Expect = 0.26
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = -1
Query: 425 IPEFYVGSILAVT--IADPHSQGKTNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYD 252
+ +F VG + V I D + +T F G + RKG G +L V +G+E +
Sbjct: 18 LTDFCVGDTIRVATKIVDGGKE-RTQTFQGTVMARKGGGAGEVISLHRVAYGEGMEKSFL 76
Query: 251 LYDPTIHKIQVLRVEKRLDDKLFYLR 174
L+ P I I+V++ K +L+YL+
Sbjct: 77 LHSPKIVGIEVVKRGKVSRARLYYLK 102
>UniRef50_Q9TM06 Cluster: Chloroplast 50S ribosomal protein L19;
n=1; Cyanidium caldarium|Rep: Chloroplast 50S ribosomal
protein L19 - Cyanidium caldarium
Length = 116
Score = 37.5 bits (83), Expect = 0.26
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Frame = -1
Query: 482 SLREKLERADMLKRRNQIDIPEFYVGSILAV-TIADPHSQGKTNRFVGICIERKGCGLRA 306
SL+ + +++ N I+ VG + + ++ +T G+ I ++
Sbjct: 6 SLKNNIS-SNLFSGHNNINQEPICVGDYIRFGLLITEGTKERTQNCEGLVIAKRFSNTCC 64
Query: 305 EFTLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLR 174
T+R V GVE L+ P I KI++L+ K KL+YLR
Sbjct: 65 NLTVRTVFQGIGVERTISLFSPKISKIKILKHYKVRRAKLYYLR 108
>UniRef50_Q0TYF8 Cluster: Ribosomal protein L19; n=1; Phaeosphaeria
nodorum|Rep: Ribosomal protein L19 - Phaeosphaeria
nodorum (Septoria nodorum)
Length = 290
Score = 37.1 bits (82), Expect = 0.34
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = -1
Query: 350 FVGICIERKGCGLRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQVL-RVEKRL-DDKLFYL 177
F G+CI + G+ LR + GVE+ Y +Y P + I+V+ R KR +L Y+
Sbjct: 179 FAGVCINIRRRGIDTAILLRGQLTRVGVEMWYKIYSPLVEGIEVVQRAAKRARRARLTYM 238
Query: 176 R 174
R
Sbjct: 239 R 239
>UniRef50_P25626 Cluster: 54S ribosomal protein IMG1, mitochondrial
precursor; n=4; Saccharomycetaceae|Rep: 54S ribosomal
protein IMG1, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 169
Score = 37.1 bits (82), Expect = 0.34
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = -1
Query: 392 VTIADPHSQGKTNRFVG--ICIERKGCGLRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQV 219
V I S+ + FVG + I+RK A LRN + VE+R L+ P I +I +
Sbjct: 76 VRIVYDSSKCSYDTFVGYILSIDRKQLVQDASLLLRNQIAKTAVEIRVPLFSPLIERIDL 135
Query: 218 L--RVEKRLDDKLFYLR 174
L V R +K +Y+R
Sbjct: 136 LTPHVSSRQRNKHYYIR 152
>UniRef50_Q6FKK6 Cluster: Similar to sp|P25626 Saccharomyces
cerevisiae YCR046c PETCR46; n=1; Candida glabrata|Rep:
Similar to sp|P25626 Saccharomyces cerevisiae YCR046c
PETCR46 - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 177
Score = 36.7 bits (81), Expect = 0.45
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Frame = -1
Query: 374 HSQGKTN--RFVG--ICIERKGCGLRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQVLRVE 207
+ Q K N FVG + ++RK A LRN V VE+R ++ P I +I VLR
Sbjct: 89 YDQSKCNYDTFVGYVLSVDRKELIEDASVLLRNQVAKTMVEMRIPIFSPLIERIDVLRKS 148
Query: 206 --KRLDDKLFYLRD 171
KR +K +Y+R+
Sbjct: 149 DGKRKRNKHYYIRN 162
>UniRef50_P51331 Cluster: Chloroplast 50S ribosomal protein L19;
n=2; Porphyra|Rep: Chloroplast 50S ribosomal protein L19
- Porphyra purpurea
Length = 123
Score = 36.7 bits (81), Expect = 0.45
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Frame = -1
Query: 428 DIPEFYVGSILAV-TIADPHSQGKTNRFVGICIERKGC-GLRAEFTLRNVVDHQGVEVRY 255
++PE VG + + + S+ + G+ + RK L TLR GVE +
Sbjct: 23 ELPEIKVGDTIRLGLLVKEGSKTREQLCEGVVLSRKKRKSLNTSLTLRCSFQGVGVERVF 82
Query: 254 DLYDPTIHKIQVLRVEKRLDDKLFYLRDALPEYS 153
L P + ++V+R K KL+YLRD L + S
Sbjct: 83 FLNSPRVTFVKVIRRAKVRRAKLYYLRDLLGKAS 116
>UniRef50_A6LXF7 Cluster: Glycoside hydrolase, family 31; n=6;
Bacteria|Rep: Glycoside hydrolase, family 31 -
Clostridium beijerinckii NCIMB 8052
Length = 675
Score = 36.3 bits (80), Expect = 0.60
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Frame = -1
Query: 329 RKGCGLRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDK---LFYLRDALPE 159
+KG +R + +R ++ G V YD +P +K DK +F+L +A PE
Sbjct: 336 KKGYLVRVDMGIRTTMNFLGDTVFYDSTNPAARDFVWRTAKKNYYDKGIKIFWLAEAEPE 395
Query: 158 YSTFSFDMDPEILPEGTPVPINPVKVELKPKPWLERWERQELQGISNI 15
YS + F+ L G+ V I + + K + + +++ + I N+
Sbjct: 396 YSVYDFENYRYHL--GSNVQIGNIYPAMYAKTFFDGMKKEGQENIINL 441
>UniRef50_Q20EU4 Cluster: Ribosomal protein L19; n=2;
Chlorophyta|Rep: Ribosomal protein L19 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 95
Score = 36.3 bits (80), Expect = 0.60
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Frame = -1
Query: 455 DMLKRRNQIDIPEFYVGSILAVTIADPHSQGKTNR-------FVGICIERKGCGLRAEFT 297
D+ R+ + +PE VG + + + P ++ KT++ + G + ++G G+ T
Sbjct: 9 DIEDRQLKEGLPEVKVGDTVKLNVFFPGAKDKTSKSKKRTQAYTGTIVAKRGAGVNTTIT 68
Query: 296 LRNVVDHQGVEVRYDLYDPTIHKIQVL 216
+R V GVE + L+ P + I ++
Sbjct: 69 VRRVSRGVGVERIFPLHSPELESITLV 95
>UniRef50_Q6C0I6 Cluster: Similar to KLLA-IPF1520.1 Kluyveromyces
lactis; n=1; Yarrowia lipolytica|Rep: Similar to
KLLA-IPF1520.1 Kluyveromyces lactis - Yarrowia
lipolytica (Candida lipolytica)
Length = 181
Score = 36.3 bits (80), Expect = 0.60
Identities = 15/61 (24%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = -1
Query: 350 FVGICIERKGCGLRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQVLR--VEKRLDDKLFYL 177
F G+ + GL + LR+ + G++ R+ ++ PT+ ++++R +K ++L+Y+
Sbjct: 94 FTGLTMVVDFRGLSSNLLLRSKITKIGIDRRFKIFSPTVESVKIIRRATQKYTAERLYYI 153
Query: 176 R 174
R
Sbjct: 154 R 154
>UniRef50_A0YW97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like protein -
Lyngbya sp. PCC 8106
Length = 727
Score = 35.9 bits (79), Expect = 0.79
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = -1
Query: 608 PPSR*LKKLRRLGVDLKKVNPLLENRHAYPEFLPD----PNPKWRNSLRE 471
P S+ +KL G +K++NPL EN++ +P + + + WRN LRE
Sbjct: 217 PESQLTEKLTLAGFRIKQINPLEENKYQFPNSIEESKQLESQGWRNILRE 266
>UniRef50_Q8F3L4 Cluster: 50S ribosomal protein L19; n=5;
Spirochaetales|Rep: 50S ribosomal protein L19 -
Leptospira interrogans
Length = 138
Score = 35.9 bits (79), Expect = 0.79
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = -1
Query: 302 FTLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRD 171
FT+R V GVE + L+ P I KI+++R K KL+YLR+
Sbjct: 58 FTVRRVSYDVGVERIFPLFSPRIAKIELIRKGKVRRAKLYYLRN 101
>UniRef50_Q64RW6 Cluster: Conserved protein found in conjugate
transposon TraA; n=3; Bacteroides|Rep: Conserved protein
found in conjugate transposon TraA - Bacteroides
fragilis
Length = 262
Score = 35.5 bits (78), Expect = 1.0
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = -1
Query: 335 IERKGCGLRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRDALP 162
+ RK C L+ + N+VD +G + YD ++ I K+ + + + + L Y R+A P
Sbjct: 162 VARKNCNLKGTWLFWNMVDRRGRKDLYDAWNRVIDKMGLRLLSSHIPNTLRYNREADP 219
>UniRef50_Q1ACJ4 Cluster: Ribosomal protein L19; n=1; Chara
vulgaris|Rep: Ribosomal protein L19 - Chara vulgaris
(Common stonewort)
Length = 129
Score = 35.5 bits (78), Expect = 1.0
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = -1
Query: 425 IPEFYVGSILAVT-IADPHSQGKTNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYDL 249
+P VG IL V I ++ + I + G LR VV GVE +
Sbjct: 27 LPIIRVGDILKVNLIVQEANKSRFQAIEATVIAKTSSGSNKIVNLRKVVQGIGVERLIPI 86
Query: 248 YDPTIHKIQVLRVEKRLDDKLFYLRDALPEYS 153
+ + +QV+R K KL+YLR + + S
Sbjct: 87 HSSMVATLQVIRHSKVRKAKLYYLRSSFGKRS 118
>UniRef50_Q06J53 Cluster: 50S ribosomal protein L19; n=1;
Bigelowiella natans|Rep: 50S ribosomal protein L19 -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 118
Score = 35.5 bits (78), Expect = 1.0
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Frame = -1
Query: 440 RNQIDIPEFYVGSILAVTIADPH-SQGKTNRFVGICIERKGCGLRAEFTLRNVVDHQGVE 264
+ ++D P+ VG I+ V + S+ + ++ G I +K + T+R + G+E
Sbjct: 14 QKKLDRPKISVGDIVTVKVLIKEGSKERLQQYEGTVISKKSQDI---ITIRRIFQGIGIE 70
Query: 263 VRYDLYDPTIHKIQVLRVEKRLDDKLFYLRD 171
+ L P + I + R K KL++LR+
Sbjct: 71 YVFALSTPQVLSITIKRHSKIKRSKLYFLRN 101
>UniRef50_UPI00006CBFD0 Cluster: hypothetical protein
TTHERM_00408950; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00408950 - Tetrahymena
thermophila SB210
Length = 242
Score = 34.7 bits (76), Expect = 1.8
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = -1
Query: 530 HAYPEFLPDPNPKWRNSLREKLERADMLK--RRNQIDIPEFYVGSILAVTIADPHSQGKT 357
+ +P P P +L +++E+ + L R+ + IP+F G I+ S+G
Sbjct: 68 YTWPPVYPHPTRLEGRALIKEVEQREKLAIDRQREFKIPDFRAGDIIQFHFLKSISEGYG 127
Query: 356 NRFVGICIER-KGCGLRAEFTLRNVVDHQGVEV 261
N G+C R K L A F V GVEV
Sbjct: 128 NTVTGMCTARYKNNSLMAGFDC--VFRFHGVEV 158
>UniRef50_Q4G3E5 Cluster: Ribosomal protein L19; n=1; Emiliania
huxleyi|Rep: Ribosomal protein L19 - Emiliania huxleyi
Length = 127
Score = 33.9 bits (74), Expect = 3.2
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Frame = -1
Query: 482 SLREKL-ERADMLKRRNQIDIPEFYVGSILAVTI------ADPHSQGKTNRFV--GICIE 330
S+ EK+ + +D ++ ++P+F VG + VT+ AD +GK V G+ I
Sbjct: 2 SVLEKIVKESDFFYKKE--NLPKFRVGDTVKVTLYLELPKADEAKKGKERIQVYQGVIIS 59
Query: 329 RKGCG--LRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRD 171
A T+R + G+E + L P + ++VL K KL+YLRD
Sbjct: 60 THNNENPTNATITVRKMFQGGGIEKVFLLNSPWLKTVEVLTSAKVRRGKLYYLRD 114
>UniRef50_Q05740 Cluster: Protein tonB; n=9; Enterobacteriaceae|Rep:
Protein tonB - Yersinia enterocolitica
Length = 255
Score = 33.9 bits (74), Expect = 3.2
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -1
Query: 134 DPEILPEGTPVPINPVKVELKPKPWLERWERQELQ 30
+PE+LPE PVPI P V+ KPKP + ++ E++
Sbjct: 90 EPEVLPEPVPVPI-PEPVKPKPKPVKKEVKKPEVK 123
>UniRef50_Q3ZZA7 Cluster: 50S ribosomal protein L19; n=5;
Bacteria|Rep: 50S ribosomal protein L19 -
Dehalococcoides sp. (strain CBDB1)
Length = 131
Score = 33.9 bits (74), Expect = 3.2
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = -1
Query: 350 FVGICIERKGCGLRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLR 174
F G+ ++ K FT+R + GVE + P + K+++++ + +LFYLR
Sbjct: 56 FQGVVLKVKQAADGGNFTVRRISYGVGVERTFPFLSPNVTKVEIMKKGRVRRARLFYLR 114
>UniRef50_A0CTC9 Cluster: Chromosome undetermined scaffold_27, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_27,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 588
Score = 33.5 bits (73), Expect = 4.2
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = -2
Query: 220 SYVLKSVLMINYFICV----MLCQSIALFHLIWTRKY-YLKELQYPSIQ*RLNLNQN 65
S + KS+LM +++C+ M+ Q ++LF W KY L+ YP R NLN +
Sbjct: 435 STIFKSILMSMFYVCIFPYGMMMQIVSLFLYYWACKYTLLRRCSYPPTINR-NLNDS 490
>UniRef50_A6GQR6 Cluster: Putative lipoprotein; n=1; Limnobacter sp.
MED105|Rep: Putative lipoprotein - Limnobacter sp.
MED105
Length = 278
Score = 33.1 bits (72), Expect = 5.6
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -1
Query: 581 RRLGVDLKKVNPLLENRHAYPEF--LPDPNPKWRNSLREKLERADMLKRRNQIDIPEFYV 408
R + LK V ++E +AY L + KW + + K RAD L++ +Q+D E
Sbjct: 84 REKNLHLKLVQTMIEQDNAYAALAHLDAYDQKWGSDRQSKQLRADSLRKTSQLDQAELVY 143
Query: 407 GSILA 393
S+L+
Sbjct: 144 KSLLS 148
>UniRef50_A3Y6M4 Cluster: Transcriptional Regulator, LysR family
protein; n=1; Marinomonas sp. MED121|Rep:
Transcriptional Regulator, LysR family protein -
Marinomonas sp. MED121
Length = 294
Score = 33.1 bits (72), Expect = 5.6
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -1
Query: 254 DLYDPTIHKIQVLRVEKRLDDKLFYLRDALPEYSTFSFDMD--PEILPEGTPV 102
D++ T + Q L + + +D LF LRD P S F+F I+P+G+P+
Sbjct: 122 DIHSTTSAECQTLLLNREVDVALFPLRDKAPALSHFAFYQHKLKAIVPKGSPL 174
>UniRef50_Q8F7Z4 Cluster: Putative uncharacterized protein; n=4;
Leptospira|Rep: Putative uncharacterized protein -
Leptospira interrogans
Length = 255
Score = 32.3 bits (70), Expect = 9.7
Identities = 15/67 (22%), Positives = 33/67 (49%)
Frame = -1
Query: 284 VDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRDALPEYSTFSFDMDPEILPEGTP 105
+ H+ + + Y IH+++ + E + D++ + + L +Y T D+ PE +P+
Sbjct: 3 ISHEQI-LELQKYQKMIHQLEKIAKESKNDEQRYRVSRDLEKYKTKMKDISPEGIPDNLD 61
Query: 104 VPINPVK 84
V +K
Sbjct: 62 VTAEQIK 68
>UniRef50_Q73QY9 Cluster: Putative uncharacterized protein; n=2;
cellular organisms|Rep: Putative uncharacterized protein
- Treponema denticola
Length = 509
Score = 32.3 bits (70), Expect = 9.7
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = -1
Query: 554 VNPLLENRHAYPEFLPDPN-PKWRNSL-REKLERADMLKRRN 435
+NP+L A PEFL N PK ++ R+K+ A+M+KR N
Sbjct: 298 INPVLPQVPAAPEFLKTTNQPKTEKTVTRKKISPAEMIKRLN 339
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,055,196
Number of Sequences: 1657284
Number of extensions: 14222681
Number of successful extensions: 40590
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 38835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40548
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45636850930
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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