Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2380
         (623 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061413-1|AAL28961.1|  306|Drosophila melanogaster LD34436p pro...   287   1e-77
AE014297-784|AAF54266.1|  306|Drosophila melanogaster CG8039-PA ...   287   1e-77
AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE...    29   5.1  
BT003576-1|AAO39580.1| 1309|Drosophila melanogaster LD40262p pro...    28   8.9  
AY069600-1|AAL39745.1|  563|Drosophila melanogaster LD35343p pro...    28   8.9  
AE013599-1197|AAF58732.2| 1309|Drosophila melanogaster CG30020-P...    28   8.9  

>AY061413-1|AAL28961.1|  306|Drosophila melanogaster LD34436p
           protein.
          Length = 306

 Score =  287 bits (703), Expect = 1e-77
 Identities = 127/177 (71%), Positives = 150/177 (84%)
 Frame = -1

Query: 533 RHAYPEFLPDPNPKWRNSLREKLERADMLKRRNQIDIPEFYVGSILAVTIADPHSQGKTN 354
           R  YPEFLPDP  +WRN +REKLER DML RR QID+PEFYVGS+LAVT +DPH+ GKT+
Sbjct: 63  RFVYPEFLPDPKVEWRNLVREKLERLDMLDRRKQIDLPEFYVGSVLAVTSSDPHAAGKTS 122

Query: 353 RFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLR 174
           RFVGICI R  CGLRA F LRNV+DHQG+EV Y+LYDPTI KI+VLR+EKRLDD LFYLR
Sbjct: 123 RFVGICINRDRCGLRARFILRNVIDHQGMEVVYELYDPTILKIEVLRLEKRLDDSLFYLR 182

Query: 173 DALPEYSTFSFDMDPEILPEGTPVPINPVKVELKPKPWLERWERQELQGISNIEQYL 3
           DALPEYSTF  +M+ E L EG PVP+N +KV L+P+PWLERWERQ L+G++NI++YL
Sbjct: 183 DALPEYSTFDENMEAEPLEEGAPVPVNDIKVVLRPRPWLERWERQNLRGVANIDEYL 239


>AE014297-784|AAF54266.1|  306|Drosophila melanogaster CG8039-PA
           protein.
          Length = 306

 Score =  287 bits (703), Expect = 1e-77
 Identities = 127/177 (71%), Positives = 150/177 (84%)
 Frame = -1

Query: 533 RHAYPEFLPDPNPKWRNSLREKLERADMLKRRNQIDIPEFYVGSILAVTIADPHSQGKTN 354
           R  YPEFLPDP  +WRN +REKLER DML RR QID+PEFYVGS+LAVT +DPH+ GKT+
Sbjct: 63  RFVYPEFLPDPKVEWRNLVREKLERLDMLDRRKQIDLPEFYVGSVLAVTSSDPHAAGKTS 122

Query: 353 RFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLR 174
           RFVGICI R  CGLRA F LRNV+DHQG+EV Y+LYDPTI KI+VLR+EKRLDD LFYLR
Sbjct: 123 RFVGICINRDRCGLRARFILRNVIDHQGMEVVYELYDPTILKIEVLRLEKRLDDSLFYLR 182

Query: 173 DALPEYSTFSFDMDPEILPEGTPVPINPVKVELKPKPWLERWERQELQGISNIEQYL 3
           DALPEYSTF  +M+ E L EG PVP+N +KV L+P+PWLERWERQ L+G++NI++YL
Sbjct: 183 DALPEYSTFDENMEAEPLEEGAPVPVNDIKVVLRPRPWLERWERQNLRGVANIDEYL 239


>AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE,
            isoform E protein.
          Length = 9606

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -1

Query: 155  STFSFDMDPEILPEGTPVPINPVKVELKPKP 63
            ST S D  PE +PE  PV   P  +E KP+P
Sbjct: 3835 STTSEDEQPETVPE--PVEAMPAPIESKPEP 3863


>BT003576-1|AAO39580.1| 1309|Drosophila melanogaster LD40262p
           protein.
          Length = 1309

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -2

Query: 85  RLNLNQNHGLNDGSDKNCKEFLILNSI 5
           R +LN +HG+NDG  ++  E  I+  +
Sbjct: 831 RKHLNAHHGINDGVSEHANEVFIIRKL 857


>AY069600-1|AAL39745.1|  563|Drosophila melanogaster LD35343p
           protein.
          Length = 563

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -2

Query: 85  RLNLNQNHGLNDGSDKNCKEFLILNSI 5
           R +LN +HG+NDG  ++  E  I+  +
Sbjct: 85  RKHLNAHHGINDGVSEHANEVFIIRKL 111


>AE013599-1197|AAF58732.2| 1309|Drosophila melanogaster CG30020-PA
           protein.
          Length = 1309

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -2

Query: 85  RLNLNQNHGLNDGSDKNCKEFLILNSI 5
           R +LN +HG+NDG  ++  E  I+  +
Sbjct: 831 RKHLNAHHGINDGVSEHANEVFIIRKL 857


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,397,983
Number of Sequences: 53049
Number of extensions: 651013
Number of successful extensions: 1627
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1627
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)