Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2379
(560 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0054 - 773395-774518,776957-777124,777455-778376 40 0.002
01_03_0303 + 14792842-14792949,14793659-14793760,14794657-147948... 39 0.003
10_01_0299 - 3101028-3102022,3103004-3103177,3105272-3106190 36 0.029
10_01_0293 + 3039945-3040857,3042457-3042630,3043562-3044556 35 0.039
09_04_0475 - 17913982-17914772,17914830-17915156,17915323-179154... 35 0.039
04_03_0592 - 17678172-17679415,17679751-17679897,17680656-17681268 35 0.051
04_03_0604 - 17916482-17917659,17918121-17918291,17919015-17919966 34 0.089
02_05_1153 - 34501778-34502961,34503052-34503219,34503306-34504263 34 0.089
10_02_0091 - 5190536-5191794,5191878-5192030,5192501-5193099,519... 33 0.12
07_01_0495 + 3722319-3722517,3723325-3723482,3723652-3723929,372... 33 0.16
09_06_0278 + 21991016-21992120,21992341-21992702,21992766-219934... 32 0.27
09_04_0479 - 17948043-17949037,17949554-17949715,17949809-179502... 32 0.27
02_01_0088 - 627825-628984,629339-629509,629612-630416 32 0.27
10_06_0116 + 10945231-10945501,10946018-10946241,10946329-109467... 31 0.63
09_06_0280 + 22010270-22011407,22011890-22013097 31 0.63
06_03_1325 - 29334401-29334859,29335163-29335857,29336538-293367... 31 0.63
04_01_0609 + 7966263-7966366,7967945-7968706,7972607-7972851,797... 30 1.5
04_03_0616 - 18052596-18053779,18053935-18054099,18056236-180562... 29 1.9
08_01_0843 - 8276619-8278991 29 2.5
01_06_1671 - 39018929-39019027,39019310-39019439,39019529-390196... 29 3.4
12_01_0101 - 779047-779298,779459-779711,779857-780005,780033-78... 28 4.4
11_01_0101 - 738305-738556,738723-738977,739306-739554,739649-73... 28 4.4
09_06_0281 + 22014394-22015534,22016041-22017056 28 4.4
01_07_0039 - 40667598-40669880 28 4.4
11_06_0527 + 24672649-24672707,24673459-24673817,24674366-246744... 27 7.7
07_03_1385 + 26189034-26189294,26189427-26189636,26191016-261910... 27 7.7
05_01_0134 - 904136-904996 27 7.7
04_03_0184 + 12395349-12395542,12396821-12397467,12398119-123986... 27 7.7
03_05_0153 + 21299150-21299593,21299733-21299873,21299971-213000... 27 7.7
01_06_0969 - 33472588-33474480,33475543-33475623,33475692-334757... 27 7.7
01_01_1079 - 8491955-8492755 27 7.7
>10_01_0054 - 773395-774518,776957-777124,777455-778376
Length = 737
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +1
Query: 319 GESMWCSCYPGFRFNAESYSKQEQPYCVDVNECA-TNNGGCEQRCVNDPGSFH*ECSPPL 495
G +C+C G+ N Y C D++ECA N C C N PG + C
Sbjct: 282 GLGYYCNCSSGYEGNP--YDDDPNKGCKDIDECAHPNKYPCHGVCRNTPGDYECRCHTGY 339
Query: 496 SLASDGKK 519
+ DG K
Sbjct: 340 QPSGDGPK 347
>01_03_0303 + 14792842-14792949,14793659-14793760,14794657-14794800,
14794906-14794986,14795078-14795147,14795267-14795337,
14795427-14795594,14796030-14796074,14796449-14796511,
14796594-14796869,14797858-14797971,14798099-14798225,
14798315-14798484,14798743-14798841,14799577-14799630,
14801487-14801522,14801741-14801844,14801952-14802186,
14802377-14802609,14802846-14803346,14803422-14803716,
14805796-14805881,14806952-14807064,14807303-14807385,
14808014-14808866,14809215-14809364,14809963-14811146
Length = 1854
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/85 (29%), Positives = 32/85 (37%), Gaps = 2/85 (2%)
Frame = +1
Query: 280 CSLNLCEQACEVQGESMWCSCYPGFRFNAESYSKQEQPYCVDVNECATNNGGCEQ--RCV 453
C E + G C+C G+ N Y C+DVNEC N C + C
Sbjct: 1375 CRSKHSECVDSINGPGYLCNCTLGYHGNP--YITDG---CIDVNECEQNQSPCPKGATCR 1429
Query: 454 NDPGSFH*ECSPPLSLASDGKKCVP 528
N G +H C LA + C P
Sbjct: 1430 NTEGWYHCSCPVGRKLAKETNTCNP 1454
>10_01_0299 - 3101028-3102022,3103004-3103177,3105272-3106190
Length = 695
Score = 35.5 bits (78), Expect = 0.029
Identities = 23/83 (27%), Positives = 32/83 (38%), Gaps = 3/83 (3%)
Frame = +1
Query: 280 CSLNLCEQACEVQGESMWCSCYPGFRFNAESYSKQEQPYCVDVNECATNNG---GCEQRC 450
C + E G +C C G+ N Y K + C D+NEC +N C C
Sbjct: 270 CVSDNSECVNSTNGPGYYCKCKQGYEGNP--YDKDQG--CKDINECDVSNKKKYPCYGVC 325
Query: 451 VNDPGSFH*ECSPPLSLASDGKK 519
N PG + C + +G K
Sbjct: 326 NNIPGDYECHCRVGYQWSGEGPK 348
>10_01_0293 + 3039945-3040857,3042457-3042630,3043562-3044556
Length = 693
Score = 35.1 bits (77), Expect = 0.039
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Frame = +1
Query: 280 CSLNLCEQACEVQGESMWCSCYPGFRFNAESYSKQEQPYCVDVNECATNNG---GCEQRC 450
C + E G +C C G+ N Y ++Q C D+NEC +N C C
Sbjct: 267 CMSDNSECVNSTNGPGYYCKCKQGYDGNP--YVDKDQG-CKDINECDVSNKKKYPCYGVC 323
Query: 451 VNDPGSFH*ECSPPLSLASDGKK 519
N PG + C + +G K
Sbjct: 324 NNIPGDYECHCRVGYQWSGEGPK 346
>09_04_0475 -
17913982-17914772,17914830-17915156,17915323-17915493,
17915583-17915824,17915862-17916049,17916184-17916253,
17916329-17916612
Length = 690
Score = 35.1 bits (77), Expect = 0.039
Identities = 27/84 (32%), Positives = 31/84 (36%), Gaps = 1/84 (1%)
Frame = +1
Query: 280 CSLNLCEQACEVQGESMWCSCYPGFRFNAESYSKQEQPYCVDVNECATNNG-GCEQRCVN 456
C N E G C C GF N Y K C D+NEC N C C N
Sbjct: 223 CVSNNSECLNSTNGRGYRCKCSKGFDGNP--YVKDGLLGCRDINECLDNTTYPCAGICEN 280
Query: 457 DPGSFH*ECSPPLSLASDGKKCVP 528
GS+ C + + G CVP
Sbjct: 281 TIGSYKCSCPQGQNELARG-VCVP 303
>04_03_0592 - 17678172-17679415,17679751-17679897,17680656-17681268
Length = 667
Score = 34.7 bits (76), Expect = 0.051
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +1
Query: 319 GESMWCSCYPGFRFNAESYSKQEQPYCVDVNECA-TNNGGCEQRCVNDPGSFH*ECSPPL 495
G +C C GF N Q C D+NEC +N C +C+N G F +C P
Sbjct: 180 GPGYFCKCSQGFEGNPYL---QGHDGCQDINECEDSNKYPCYGKCINKLGGF--DCFCPA 234
Query: 496 SLASD 510
D
Sbjct: 235 GTRGD 239
>04_03_0604 - 17916482-17917659,17918121-17918291,17919015-17919966
Length = 766
Score = 33.9 bits (74), Expect = 0.089
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +1
Query: 319 GESMWCSCYPGFRFNAESYSKQEQPYCVDVNECATNNGGCE--QRCVNDPGSFH*ECSPP 492
G C+C G++ N Y + Q C D++ECA C C N PG F EC P
Sbjct: 292 GPGYICNCSEGYQGNP--YLQDGQHGCTDIDECADPKYPCSVPGTCHNLPGGF--ECLCP 347
Query: 493 LS 498
S
Sbjct: 348 RS 349
>02_05_1153 - 34501778-34502961,34503052-34503219,34503306-34504263
Length = 769
Score = 33.9 bits (74), Expect = 0.089
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Frame = +1
Query: 319 GESMWCSCYPGFRFNAESYSKQEQPYCVDVNECA-TNNGGCEQRCVNDPGSFH*ECSPPL 495
G+ C C G+ N C D++EC T C +C N GS+ EC P
Sbjct: 297 GQGYRCRCSKGYEGNPYLDGG-----CKDIDECQRTKEYPCFGKCTNTIGSYTCECRPGT 351
Query: 496 S-LASDGKKCVPRD 534
S A+ C+P D
Sbjct: 352 SGNATQENGCLPTD 365
>10_02_0091 -
5190536-5191794,5191878-5192030,5192501-5193099,
5193771-5193837,5194177-5195170
Length = 1023
Score = 33.5 bits (73), Expect = 0.12
Identities = 23/85 (27%), Positives = 34/85 (40%)
Frame = +1
Query: 217 LHCCDTHQHVAGRCIPKSMEPCSLNLCEQACEVQGESMWCSCYPGFRFNAESYSKQEQPY 396
L C + + +G + C LN+ G CSC PG+R N
Sbjct: 500 LTCQEAQHNTSGYACVSTSSSC-LNVLSSMDGYVGYR--CSCLPGYRGNPYILDG----- 551
Query: 397 CVDVNECATNNGGCEQRCVNDPGSF 471
C D++EC G C+ C N G++
Sbjct: 552 CEDIDECRETPGICKGVCKNTVGNY 576
>07_01_0495 +
3722319-3722517,3723325-3723482,3723652-3723929,
3723946-3724474
Length = 387
Score = 33.1 bits (72), Expect = 0.16
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 397 CVDVNECA-TNNGGCEQRCVNDPGSFH*ECSPPLS 498
C D+NEC GC C+N PG + C P S
Sbjct: 65 CTDINECLHPKEYGCYGNCMNTPGGYTCVCPPGTS 99
>09_06_0278 +
21991016-21992120,21992341-21992702,21992766-21993459,
21994064-21994191
Length = 762
Score = 32.3 bits (70), Expect = 0.27
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +1
Query: 397 CVDVNECA-TNNGGCEQRCVNDPGSFH*EC 483
C D+NEC GC C N PG+F C
Sbjct: 320 CQDINECERAKENGCFGECTNTPGAFLCRC 349
>09_04_0479 -
17948043-17949037,17949554-17949715,17949809-17950262,
17952895-17953326
Length = 680
Score = 32.3 bits (70), Expect = 0.27
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 334 CSCYPGFRFNAESYSKQEQPYCVDVNECATN-NGGCEQRCVNDPGSFH*ECSPPLSLASD 510
C C G+ N Y K C D++EC N C+ C N G+F CSP S +
Sbjct: 278 CKCSNGYEGNP--YIKDG---CKDIDECLNNATYPCKGICTNTLGNFTCSCSPG-SYMMN 331
Query: 511 GKKCVPR 531
G C+P+
Sbjct: 332 G-DCMPK 337
>02_01_0088 - 627825-628984,629339-629509,629612-630416
Length = 711
Score = 32.3 bits (70), Expect = 0.27
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +1
Query: 334 CSCYPGFRFNAESYSKQEQPYCVDVNECATNNGGCEQRCVNDPGSFH*ECSP 489
C+C GF N + C D+NEC + C C N G +H C P
Sbjct: 251 CACNNGFAGNPYL-----EGGCQDINECESPGQYCHGICDNTIGGYHCYCGP 297
>10_06_0116 +
10945231-10945501,10946018-10946241,10946329-10946725,
10946804-10946893,10947118-10947239,10947390-10947428
Length = 380
Score = 31.1 bits (67), Expect = 0.63
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = -1
Query: 263 GIHRPATCWCVSQQCSLTHCTSAS-PTRHVCRDRNTRSVGHRAVLLSITSMVSVRCGSSA 87
GI +C S+ L +C P DRN GH AV++ +RCG
Sbjct: 194 GIPLVGAFYCGSRLEKLEYCQIYRVPKLSKFLDRNLIPTGHAAVIIG----AGMRCGIQY 249
Query: 86 LYPLSSW 66
LY L+SW
Sbjct: 250 LYFLNSW 256
>09_06_0280 + 22010270-22011407,22011890-22013097
Length = 781
Score = 31.1 bits (67), Expect = 0.63
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +1
Query: 397 CVDVNECAT-NNGGCEQRCVNDPGSFH*EC 483
C D+NEC GC C N PG+F C
Sbjct: 331 CQDINECERPKEHGCFGECTNTPGAFLCRC 360
>06_03_1325 -
29334401-29334859,29335163-29335857,29336538-29336750,
29338791-29339472,29339781-29340020
Length = 762
Score = 31.1 bits (67), Expect = 0.63
Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Frame = +1
Query: 304 ACEVQGESMWCSCYPGFRFNAESYSKQEQPYCVDVNECATNNGGCEQR--CVNDPGSFH* 477
AC + C+C G++ N C D++ CA N GC C N PG +
Sbjct: 280 ACVGTADGYVCNCTSGYKGNPYLPGG-----CTDIDVCAPGNDGCPDGMICSNFPGGHNC 334
Query: 478 EC 483
C
Sbjct: 335 SC 336
>04_01_0609 +
7966263-7966366,7967945-7968706,7972607-7972851,
7976940-7977107,7977471-7977734,7977962-7978509
Length = 696
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 397 CVDVNECATNN-GGCEQRCVNDPGSFH*ECS 486
C DVNEC N+ G C N GS+ +C+
Sbjct: 369 CKDVNECENNSICGAGSTCKNTEGSYRCDCN 399
>04_03_0616 -
18052596-18053779,18053935-18054099,18056236-18056260,
18057259-18057312,18057354-18057619,18058633-18059371
Length = 810
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +1
Query: 403 DVNECA-TNNGGCEQRCVNDPGSFH*EC 483
D+NEC +NN C C N PG F C
Sbjct: 362 DINECQDSNNYPCHGECHNKPGDFDCFC 389
>08_01_0843 - 8276619-8278991
Length = 790
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Frame = +1
Query: 259 IPKSMEPCSLN-LC--EQACEV--QGESMWCSCYPGFRFNAESYSKQ 384
+P S + CS+ +C C+V GE+ CSC PGF F + + S Q
Sbjct: 287 VPPSNDRCSVKGVCGPNSFCQVTSSGETS-CSCLPGFEFLSANQSTQ 332
>01_06_1671 -
39018929-39019027,39019310-39019439,39019529-39019637,
39020183-39020216,39020376-39021151,39021328-39021464,
39021732-39021876,39021958-39022341,39022435-39023210,
39023609-39023658,39024213-39024262,39024361-39024455,
39024539-39024797,39024943-39024982
Length = 1027
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -1
Query: 371 LSALNRNPG*QEHHILSPCTSQACSHRFRLHGSIDFG 261
LSA+ N G QE+H+ S H F L DFG
Sbjct: 871 LSAMGENSGLQENHVGSVMDLDNMGHDFSLKECSDFG 907
>12_01_0101 -
779047-779298,779459-779711,779857-780005,780033-780281,
780377-780571,780681-780788,780935-781156,781669-781986,
781988-782615,783059-783135,783161-783267,783491-783619,
783763-783820,783902-783984,784458-784539,784617-784693,
784827-784910,784999-785068,785146-785234,785319-786008,
786485-786797
Length = 1410
Score = 28.3 bits (60), Expect = 4.4
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +1
Query: 334 CSCYPGFRFNAESYSKQEQPYCVDVNECATNNG-GCEQ-RCVNDPGSFH*ECSPPLSLAS 507
C C GF+ + K C D++EC C++ +C N GS+ CS L
Sbjct: 500 CKCPDGFK--GDGVHK-----CEDIDECKERTACQCKECKCKNTWGSYECGCSGGLLYMK 552
Query: 508 DGKKCVPRDTA 540
+ C+ ++ A
Sbjct: 553 EHDTCISKNAA 563
>11_01_0101 -
738305-738556,738723-738977,739306-739554,739649-739843,
739953-740060,740184-740405,740806-741390,741495-741863,
742423-742529,742755-742883,743027-743084,743166-743248,
744115-744196,744274-744350,744477-744560,744649-744718,
744796-744884,744965-745654,746127-746439
Length = 1338
Score = 28.3 bits (60), Expect = 4.4
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +1
Query: 334 CSCYPGFRFNAESYSKQEQPYCVDVNECATNNG-GCEQ-RCVNDPGSFH*ECSPPLSLAS 507
C C GF+ + K C D++EC C++ +C N GS+ CS L
Sbjct: 500 CKCPDGFK--GDGVHK-----CEDIDECKERTACQCKECKCKNTWGSYECGCSGGLLYMK 552
Query: 508 DGKKCVPRDTA 540
+ C+ ++ A
Sbjct: 553 EHDTCISKNAA 563
>09_06_0281 + 22014394-22015534,22016041-22017056
Length = 718
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 397 CVDVNECATNNGGCEQRCVNDPGSFH*EC 483
C D++EC G C C N PG + C
Sbjct: 334 CQDIDECKLA-GRCYGECTNTPGDYQCRC 361
>01_07_0039 - 40667598-40669880
Length = 760
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 334 CSCYPGFRFNAESYSKQEQPYCVDVNECA 420
C+ G N SY++Q C+DV +C+
Sbjct: 178 CNAVAGISNNVPSYAQQTDRSCLDVGDCS 206
>11_06_0527 +
24672649-24672707,24673459-24673817,24674366-24674435,
24674656-24674730,24674731-24674846,24674975-24675006,
24675117-24675242,24675379-24675537,24675886-24675978,
24676069-24676236,24676388-24676486,24676603-24676820,
24676900-24676957,24677421-24677509,24677590-24677721,
24678000-24678122,24678568-24678666,24678774-24678965,
24679127-24679298,24679416-24679572,24679704-24679906,
24680105-24680246,24680324-24680484,24680585-24680701,
24680788-24680874
Length = 1101
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +1
Query: 151 TDLVLRSRQTCRVGDADVQC---VRLHCCDTHQHVAGRCIP 264
+D++L+ +TCR + C H D + V+G+C P
Sbjct: 145 SDVILQFERTCRNASESISCKDEYFYHSSDAYSLVSGQCHP 185
>07_03_1385 +
26189034-26189294,26189427-26189636,26191016-26191092,
26191196-26191340
Length = 230
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 5 RWAPWPLCYFSSILLPWYSATTT 73
RWAPWPL +++LL +A T
Sbjct: 12 RWAPWPLLAAAAVLLLLSAAPRT 34
>05_01_0134 - 904136-904996
Length = 286
Score = 27.5 bits (58), Expect = 7.7
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -3
Query: 474 VEASRIIDAALLTPTVVRRTLVYINTIRLLLLGV-AFRVEPEPRV 343
V ASR+ LL + +RR L + RL LLGV +F P R+
Sbjct: 69 VVASRLYGRLLLPGSPLRRRLALLAPTRLSLLGVGSFENSPSSRL 113
>04_03_0184 +
12395349-12395542,12396821-12397467,12398119-12398655,
12399087-12399239,12399315-12399809,12400032-12400555
Length = 849
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = +1
Query: 334 CSCYPGFRFNAESYSKQEQPYCVDVNECATNNGGCEQRCVNDPGSFH-*ECSPPLSLASD 510
C C GF N + C DV+EC G + C N+ GS+ EC
Sbjct: 442 CKCMDGFHGNPYDANG-----CEDVDECKKTPGIFKGICHNNIGSYQCMECLDKTEYDVT 496
Query: 511 GKKCVPR 531
+CV R
Sbjct: 497 AMQCVSR 503
>03_05_0153 +
21299150-21299593,21299733-21299873,21299971-21300084,
21300181-21300354,21300486-21300494
Length = 293
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 222 LLRYTPTRRWTVYSEINGAVQSEPV*ASLRSAGREY 329
+LRY P W+ Y E A+++ PV A + +G Y
Sbjct: 155 ILRYMPEHNWSAYEE---ALKTNPVLAKMMISGVVY 187
>01_06_0969 -
33472588-33474480,33475543-33475623,33475692-33475740,
33475866-33476281,33477208-33477447
Length = 892
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +3
Query: 198 RRTMREAALLRYTPTRRWTVYSEINGAVQSE 290
RRT R LRY P + T S ING V +E
Sbjct: 766 RRTYRRMVFLRYEPNNQ-TYLSLINGYVSAE 795
>01_01_1079 - 8491955-8492755
Length = 266
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Frame = +1
Query: 175 QTCRVGDADVQCVRL---HCCDTHQHV 246
QTCR V+CV HCCD H V
Sbjct: 44 QTCRRDHYCVRCVHAFCSHCCDDHHFV 70
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,186,506
Number of Sequences: 37544
Number of extensions: 425198
Number of successful extensions: 1270
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1266
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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