Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2379
         (560 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.    37   4e-04
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   1.7  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   1.7  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    25   1.7  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   3.0  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          24   3.0  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   6.8  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    23   9.0  

>AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.
          Length = 187

 Score = 37.1 bits (82), Expect = 4e-04
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +1

Query: 415 CATNNGGCEQRCVNDPGSFH*ECSPPLSLASDGKKCV--PRDTAGYCRT 555
           CA  NGGC   C+ +P S+   C   + L  +GK C   P   +G C T
Sbjct: 4   CAHKNGGCSYICLLNPTSYSCACPIGIQLKDNGKTCKSWPLQLSGVCCT 52


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 10/21 (47%), Positives = 17/21 (80%), Gaps = 2/21 (9%)
 Frame = +1

Query: 64   YHDDSGY--RAEEPHLTDTID 120
            ++++ GY  R E+P+LT+TID
Sbjct: 2096 HYNEPGYLTRIEDPYLTETID 2116


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 10/21 (47%), Positives = 17/21 (80%), Gaps = 2/21 (9%)
 Frame = +1

Query: 64   YHDDSGY--RAEEPHLTDTID 120
            ++++ GY  R E+P+LT+TID
Sbjct: 2097 HYNEPGYLTRIEDPYLTETID 2117


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 320 PCTSQACSHRFRLHGSIDF 264
           PC  +   H   L GS+DF
Sbjct: 516 PCVDEVLKHELSLEGSLDF 534


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 455 LTQRCSHPPLFVAHSFTSTQYGCSCL 378
           L QR  +   FV HS  +T   C CL
Sbjct: 105 LFQRFFYSKSFVRHSMEATAMSCICL 130


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 455 LTQRCSHPPLFVAHSFTSTQYGCSCL 378
           L QR  +   FV HS  +T   C CL
Sbjct: 105 LFQRFFYSKSFVRHSMEATAMSCICL 130


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 136 CCYL*RRWCQ*GAVPPLCIRC 74
           CC + R +C   A PPL   C
Sbjct: 74  CCEILRLYCDTSACPPLIEFC 94


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 15  RGLCVTSPLSCCPGTLLPRRQRIQSGGT 98
           +GL   +P + CP T   R + +Q+ GT
Sbjct: 194 KGLIPVAPGAKCPITTCGRNEALQACGT 221


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,959
Number of Sequences: 2352
Number of extensions: 16000
Number of successful extensions: 118
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 118
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)