Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2378
         (670 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1954|AAF53012.2|  777|Drosophila melanogaster CG31869-P...    32   0.81 
AY113406-1|AAM29411.1|  485|Drosophila melanogaster RE12890p pro...    29   5.7  
AE014296-871|AAN11609.1|  485|Drosophila melanogaster CG32243-PA...    29   5.7  
AF358267-1|AAK40237.1|  939|Drosophila melanogaster sidestep pro...    29   7.6  
AE014297-4124|AAF56708.2|  939|Drosophila melanogaster CG31062-P...    29   7.6  

>AE014134-1954|AAF53012.2|  777|Drosophila melanogaster CG31869-PA
           protein.
          Length = 777

 Score = 31.9 bits (69), Expect = 0.81
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +2

Query: 395 CGYKTSLNLVNLTGHSTGRLTVGCEREGATCRNG 496
           C Y+TS   +  TGH        CE++G T  NG
Sbjct: 151 CQYQTSCRAIQRTGHCCPDYKCDCEKDGKTYANG 184


>AY113406-1|AAM29411.1|  485|Drosophila melanogaster RE12890p
           protein.
          Length = 485

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
 Frame = -2

Query: 201 LQHTLPSESLLYAIILAVG---PLWDF 130
           L++  P+ES+LY IIL +    P WDF
Sbjct: 413 LKYYFPTESILYQIILCISKHHPKWDF 439


>AE014296-871|AAN11609.1|  485|Drosophila melanogaster CG32243-PA
           protein.
          Length = 485

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
 Frame = -2

Query: 201 LQHTLPSESLLYAIILAVG---PLWDF 130
           L++  P+ES+LY IIL +    P WDF
Sbjct: 413 LKYYFPTESILYQIILCISKHHPKWDF 439


>AF358267-1|AAK40237.1|  939|Drosophila melanogaster sidestep
           protein.
          Length = 939

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +1

Query: 4   RSDQKLSGLRKALLLHITGYKRHGCGSYPCGLTGCPRPTSSKKI 135
           ++  ++SG     ++H+T  +R   G+Y CG T     T S  +
Sbjct: 465 KNGMRMSG-ESTEIMHLTQLERESAGAYSCGATNTEGETRSSSL 507


>AE014297-4124|AAF56708.2|  939|Drosophila melanogaster CG31062-PA
           protein.
          Length = 939

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +1

Query: 4   RSDQKLSGLRKALLLHITGYKRHGCGSYPCGLTGCPRPTSSKKI 135
           ++  ++SG     ++H+T  +R   G+Y CG T     T S  +
Sbjct: 465 KNGMRMSG-ESTEIMHLTQLERESAGAYACGATNTEGETRSSSL 507


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,787,873
Number of Sequences: 53049
Number of extensions: 652962
Number of successful extensions: 1361
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1361
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)