Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2378
(670 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein. 23 2.0
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 6.1
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 6.1
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 6.1
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 6.1
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 8.0
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 8.0
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 8.0
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 8.0
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 8.0
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 8.0
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 8.0
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 8.0
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 8.0
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 8.0
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 8.0
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 8.0
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 8.0
>AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein.
Length = 104
Score = 23.4 bits (48), Expect = 2.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 470 REGATCRNGVLKC 508
R+G +CRNGV C
Sbjct: 90 RKGGSCRNGVCIC 102
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.8 bits (44), Expect = 6.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2
Query: 594 LHKSVAFVEKNIYLILNYSESGPVK 520
L KS + N YLI N + + P+K
Sbjct: 225 LRKSPSLTSLNAYLIKNQTITCPIK 249
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.8 bits (44), Expect = 6.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2
Query: 594 LHKSVAFVEKNIYLILNYSESGPVK 520
L KS + N YLI N + + P+K
Sbjct: 225 LRKSPSLTSLNAYLIKNQTITCPIK 249
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.8 bits (44), Expect = 6.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2
Query: 594 LHKSVAFVEKNIYLILNYSESGPVK 520
L KS + N YLI N + + P+K
Sbjct: 276 LRKSPSLTSLNAYLIKNQTITCPIK 300
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.8 bits (44), Expect = 6.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2
Query: 594 LHKSVAFVEKNIYLILNYSESGPVK 520
L KS + N YLI N + + P+K
Sbjct: 225 LRKSPSLTSLNAYLIKNQTITCPIK 249
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 359 YRKRGRQIEKDSMQLDKF 306
YRK+ RQ EK + +KF
Sbjct: 12 YRKKDRQYEKLHNEKEKF 29
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 359 YRKRGRQIEKDSMQLDKF 306
YRK+ RQ EK + +KF
Sbjct: 12 YRKKDRQYEKLHNEKEKF 29
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 359 YRKRGRQIEKDSMQLDKF 306
YRK+ RQ EK + +KF
Sbjct: 12 YRKKDRQYEKLHNEKEKF 29
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 359 YRKRGRQIEKDSMQLDKF 306
YRK+ RQ EK + +KF
Sbjct: 12 YRKKDRQYEKLHNEKEKF 29
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 359 YRKRGRQIEKDSMQLDKF 306
YRK+ RQ EK + +KF
Sbjct: 12 YRKKDRQYEKLHNEKEKF 29
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 359 YRKRGRQIEKDSMQLDKF 306
YRK+ RQ EK + +KF
Sbjct: 12 YRKKDRQYEKLHNEKEKF 29
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 359 YRKRGRQIEKDSMQLDKF 306
YRK+ RQ EK + +KF
Sbjct: 12 YRKKDRQYEKLHNEKEKF 29
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 359 YRKRGRQIEKDSMQLDKF 306
YRK+ RQ EK + +KF
Sbjct: 12 YRKKDRQYEKLHNEKEKF 29
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 359 YRKRGRQIEKDSMQLDKF 306
YRK+ RQ EK + +KF
Sbjct: 12 YRKKDRQYEKLHNEKEKF 29
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 359 YRKRGRQIEKDSMQLDKF 306
YRK+ RQ EK + +KF
Sbjct: 12 YRKKDRQYEKLHNEKEKF 29
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 359 YRKRGRQIEKDSMQLDKF 306
YRK+ RQ EK + +KF
Sbjct: 245 YRKKDRQYEKLHNEKEKF 262
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 359 YRKRGRQIEKDSMQLDKF 306
YRK+ RQ EK + +KF
Sbjct: 245 YRKKDRQYEKLHNEKEKF 262
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 359 YRKRGRQIEKDSMQLDKF 306
YRK+ RQ EK + +KF
Sbjct: 245 YRKKDRQYEKLHNEKEKF 262
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,486
Number of Sequences: 438
Number of extensions: 4219
Number of successful extensions: 26
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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