Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2377
         (737 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q380H3 Cluster: ENSANGP00000026392; n=2; Culicidae|Rep:...    39   0.15 
UniRef50_Q2SPE7 Cluster: Cell division protein; n=1; Hahella che...    35   2.4  
UniRef50_UPI000051A3B6 Cluster: PREDICTED: similar to CG7065-PA;...    34   3.2  
UniRef50_A0BIW4 Cluster: Chromosome undetermined scaffold_11, wh...    34   3.2  
UniRef50_Q8D2R7 Cluster: Elongation factor P; n=1; Wigglesworthi...    33   7.3  
UniRef50_Q3D028 Cluster: Membrane protein, putative; n=9; Strept...    33   9.7  

>UniRef50_Q380H3 Cluster: ENSANGP00000026392; n=2; Culicidae|Rep:
           ENSANGP00000026392 - Anopheles gambiae str. PEST
          Length = 563

 Score = 38.7 bits (86), Expect = 0.15
 Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
 Frame = +2

Query: 260 NDIVRRRNDNVMDCRVLYIKPIPKFWNAEKVKSFIQDKCKSRTIPENIKFVLLFIEDNGD 439
           ND  R R+    DCR +Y+  +P  +  + +K   + +        ++ FV LF ++N  
Sbjct: 9   NDRDRSRDRERSDCRRIYVSNVPYEYRWQDLKDLFRKEV------GDVSFVELFHDENNK 62

Query: 440 P-SC-LVKFANSYICNLALMELENVEIDGKRLFINLD 544
           P  C +V+F       +AL ++   +I+G+ L I  D
Sbjct: 63  PRGCGIVEFEKPEHVQMALEKMNRYDINGRNLVIKED 99


>UniRef50_Q2SPE7 Cluster: Cell division protein; n=1; Hahella
           chejuensis KCTC 2396|Rep: Cell division protein -
           Hahella chejuensis (strain KCTC 2396)
          Length = 344

 Score = 34.7 bits (76), Expect = 2.4
 Identities = 19/71 (26%), Positives = 42/71 (59%)
 Frame = +2

Query: 215 SRSRSPVRSKNLSKQNDIVRRRNDNVMDCRVLYIKPIPKFWNAEKVKSFIQDKCKSRTIP 394
           +RS++    K+LS   D++   +DN +   V+ ++P P++  AEKV++F +   K   + 
Sbjct: 136 NRSQALEEFKSLSGWGDVLAYLDDNPLPA-VIVLQPAPEYGQAEKVQAFTESLSKLPEV- 193

Query: 395 ENIKFVLLFIE 427
           +N++  L +++
Sbjct: 194 DNVQLDLQWVK 204


>UniRef50_UPI000051A3B6 Cluster: PREDICTED: similar to CG7065-PA; n=1;
            Apis mellifera|Rep: PREDICTED: similar to CG7065-PA -
            Apis mellifera
          Length = 1243

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = +2

Query: 206  YGRSRSRSPVRSKNLSKQND 265
            + RSRSRSPVRSK L+K ND
Sbjct: 1052 HSRSRSRSPVRSKELTKTND 1071


>UniRef50_A0BIW4 Cluster: Chromosome undetermined scaffold_11, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_11,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 156

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 18/35 (51%), Positives = 21/35 (60%)
 Frame = +1

Query: 379 IKDNTRKYKICVAFHRRQR*PFMSGQICKFLHMQF 483
           IKD  RKY+I V F   Q  PF   QICK +H+ F
Sbjct: 114 IKDKLRKYRINVHF---QINPFYQVQICKIIHLHF 145


>UniRef50_Q8D2R7 Cluster: Elongation factor P; n=1; Wigglesworthia
           glossinidia endosymbiont of Glossina brevipalpis|Rep:
           Elongation factor P - Wigglesworthia glossinidia
           brevipalpis
          Length = 189

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 21/87 (24%), Positives = 41/87 (47%)
 Frame = +2

Query: 287 NVMDCRVLYIKPIPKFWNAEKVKSFIQDKCKSRTIPENIKFVLLFIEDNGDPSCLVKFAN 466
           +V+D +V  +    K+WN  K ++F Q K   + + E  K+++  +E      C+V F +
Sbjct: 67  DVLDVKVKSLYKDKKYWNFIKKENFEQFKISKKNLGEKYKWIIEQLE------CIVTFWD 120

Query: 467 SYICNLALMELENVEIDGKRLFINLDT 547
               N+ L    ++++      I  DT
Sbjct: 121 ENPINITLPRFVDIKVCNANFDIKGDT 147


>UniRef50_Q3D028 Cluster: Membrane protein, putative; n=9;
           Streptococcus agalactiae|Rep: Membrane protein, putative
           - Streptococcus agalactiae H36B
          Length = 518

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = -3

Query: 333 NLGIGFM-YNTLQSITLSLRRRTISFCLDRFLERTGE 226
           +L IG + YNT Q++TLS  RR IS  L   ++R G+
Sbjct: 395 SLSIGLLVYNTYQNVTLSKERRDISHYLTTKIDRDGK 431


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,046,855
Number of Sequences: 1657284
Number of extensions: 12533140
Number of successful extensions: 31133
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31100
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)