SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2377
         (737 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   0.48 
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   1.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.6  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   2.6  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    23   2.6  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   3.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   3.4  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   3.4  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   4.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.9  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   5.9  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   7.9  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = +3

Query: 381 QGQYQKI*NLCCFS*KTTVTLHVWSNLQILTY--AIWL 488
           QGQ+     LC  S  T + +HVW++ + +++    WL
Sbjct: 271 QGQFNIEMFLCNMSLLTVIPIHVWTSKEKISFLRGFWL 308


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 221 SRSPVRSKNLSKQNDIVRRRNDNVMDCRVLY 313
           +R+P  +   S   ++V RRND  +D +V Y
Sbjct: 252 ARNPKEADYPSPLYELVDRRNDENIDAQVKY 282


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +2

Query: 245 NLSKQNDIVRRRNDNVMDCRVLYIKPIPKFWNAEKVKSFIQDKCKSR-TIPENI 403
           ++  +N   RR +  V+ C     KPI   WN    +  ++ K  +R TI E I
Sbjct: 800 DIKLRNQTSRRGDPAVLQCEAKGEKPIGILWNINNKR--LEPKGDNRYTIREEI 851


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -2

Query: 529 KSFSINFHIF*LHQSQIAYVRICKFDQT*RVTVVFYEKQHKF 404
           K+  +N HI+ LH +   Y    KFD   R      +K+H F
Sbjct: 399 KASIVNLHIYDLHHNPAIYPDPEKFDPD-RFLPENCQKRHPF 439


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 517 INFHIF*LHQSQIAYVRICKFD 452
           ++ HIF LH++   Y  + KFD
Sbjct: 86  LHIHIFDLHRNAEIYPDLLKFD 107


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 46  KNYETTNHYELHTTHEDLRATVITC 120
           K+Y TT+H  LH  +  ++     C
Sbjct: 8   KSYFTTHHDTLHNIYTSMKPVYAIC 32


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 46  KNYETTNHYELHTTHEDLRATVITC 120
           K+Y TT+H  LH  +  ++     C
Sbjct: 8   KSYFTTHHDTLHNIYTSMKPVYAIC 32


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -2

Query: 529 KSFSINFHIF*LHQSQIAYVRICKFDQT*RVTVVFYEKQHKF 404
           K   +N HI+ LH +   Y    KFD   R      +K+H F
Sbjct: 399 KGSIVNLHIYDLHHNPAIYPDPEKFDPD-RFLPENCQKRHPF 439


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 556 IQQEKEFEQKHLLTFETENSVKPEN 630
           +QQ KEF+ K L++   E    PE+
Sbjct: 519 VQQMKEFDGKTLVSVTKEGLELPED 543


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 51  LRNYEPLRTTHYTRRSKSYS 110
           LR+Y   ++ HY RR +S S
Sbjct: 789 LRSYHQQQSHHYGRRERSGS 808


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 603 NRELSQARKRKITKIRYSKPSNRTSRSPQM 692
           N+E+ +  KRK  K+    PS  +S SP++
Sbjct: 98  NQEI-RGPKRKTWKVEEDSPSPTSSVSPEV 126


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 235 DRGTRSATSIHDEIGIELPKI 173
           D G RSA S H+E+   L K+
Sbjct: 102 DFGVRSAPSTHEELLEVLKKV 122


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,860
Number of Sequences: 336
Number of extensions: 3755
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -