Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2377
         (737 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   1.3  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   3.0  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   3.0  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   3.0  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   4.0  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     23   4.0  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   5.2  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
 Frame = +2

Query: 257 QNDIVRRRNDNVMDCRVLYIKPIPKFWNAEKVKSFIQDKCKSR-TIPENI 403
           +N   RR    V+ C     KPI   WN    +  +  K  SR TI E I
Sbjct: 784 KNQTARRGEPAVLQCEAQGEKPIGILWNMNNKR--LDPKSDSRYTIREEI 831


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 635 DYQNSVQQAEQSHESQPANER 697
           D QN+ Q  +Q+H S  +N R
Sbjct: 439 DNQNNNQHNDQAHHSSKSNNR 459


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = +2

Query: 329 KFWNAEKVKSFIQDKCKSRTIPENIKFVLLFIEDNGDPSCLVKFAN 466
           KF + +K   F +    +R + +N+       EDNG    ++ F+N
Sbjct: 465 KFASLKKSPYFKEANLNTRMLNDNVFAFSRETEDNGSLYAILNFSN 510


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = +2

Query: 329 KFWNAEKVKSFIQDKCKSRTIPENIKFVLLFIEDNGDPSCLVKFAN 466
           KF + +K   F +    +R + +N+       EDNG    ++ F+N
Sbjct: 465 KFASLKKSPYFKEANLNTRMLNDNVFAFSRETEDNGSLYAILNFSN 510


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/32 (25%), Positives = 20/32 (62%)
 Frame = +2

Query: 212 RSRSRSPVRSKNLSKQNDIVRRRNDNVMDCRV 307
           R+R   P  S+    ++ +V++RN ++++C +
Sbjct: 345 RARGNQPSTSECGEFRSVVVQKRNGSMIECNI 376


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 18/56 (32%), Positives = 22/56 (39%)
 Frame = -3

Query: 411 TNFIFSGIVLDLHLSWIKLFTFSAFQNLGIGFMYNTLQSITLSLRRRTISFCLDRF 244
           T +  SG V DL    I +  F    N        T  S+    RRR +   LDRF
Sbjct: 165 TRWSISGTVFDL----INIHLFHDASNF---IAMETFPSVYSKTRRRALEHTLDRF 213


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +2

Query: 188 YSYFVMYGRSRSRSPVRSKNLSKQNDIVRRRNDNVMD 298
           Y Y    G + S S V  K   ++   + R+N + +D
Sbjct: 142 YFYSKSNGSNSSNSDVLFKQNKEEEQTINRKNSDYLD 178


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,804
Number of Sequences: 438
Number of extensions: 4477
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)