Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2375
         (587 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   3.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   3.3  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   7.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.7  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   7.7  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 325 LCFSSSKLDLAQTTHHVLLKW 263
           L  + S +DL+Q T++V L W
Sbjct: 274 LVINESIIDLSQQTYNVHLMW 294


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 122 CYLLKLFCIYYV 87
           CY + LF +YY+
Sbjct: 148 CYFIYLFTVYYI 159


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 119 YLLKLFCIYYVM 84
           Y L LFC+ YV+
Sbjct: 169 YTLHLFCVLYVV 180


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 122 CYLLKLFCIYY 90
           C L+ L CIYY
Sbjct: 230 CVLIILLCIYY 240


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 119 YLLKLFCIYYVM 84
           Y L LFC+ YV+
Sbjct: 169 YTLHLFCVLYVV 180


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,550
Number of Sequences: 336
Number of extensions: 3107
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)