Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2375
(587 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77661-8|CAB01189.1| 438|Caenorhabditis elegans Hypothetical pr... 28 4.3
U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass... 28 5.7
AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein. 28 5.7
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein. 28 5.7
Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical pr... 27 7.5
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for... 27 7.5
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 27 7.5
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 27 7.5
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei... 27 7.5
AF164625-1|AAD47816.1| 944|Caenorhabditis elegans tandem-array-... 27 9.9
AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array ... 27 9.9
AC006722-5|AAK68410.3| 703|Caenorhabditis elegans Hypothetical ... 27 9.9
AC006645-10|AAF39849.1| 746|Caenorhabditis elegans Hypothetical... 27 9.9
>Z77661-8|CAB01189.1| 438|Caenorhabditis elegans Hypothetical
protein F40G12.10 protein.
Length = 438
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +1
Query: 322 TIDRKRATSLPRRGPKSQSSETRAHSFPSSTLLSDPR 432
++ ++R + L RR KS+S+ + + P+S L +DP+
Sbjct: 28 SMSKERGSELSRRPQKSRSNSKQKATGPTSALPTDPK 64
>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 152, isoform a protein.
Length = 2560
Score = 27.9 bits (59), Expect = 5.7
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +1
Query: 265 TLVARDG*FGRDPACLS*STIDRKRATSLPRRGPK-SQSSETR-AHSFPSSTLLSDPRGG 438
T DG G D + + + + +A S PRRG + ++SS+TR A P+ T S+ +
Sbjct: 429 TCYCMDGWRGNDCSVFADAIVHVPQAQSPPRRGQEPTESSKTRKAQVKPTPT--SEKKKE 486
Query: 439 ARYPIRPIVSRITI 480
+R +PI++ + +
Sbjct: 487 SRELQKPIIATVQV 500
>AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.
Length = 2502
Score = 27.9 bits (59), Expect = 5.7
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +1
Query: 265 TLVARDG*FGRDPACLS*STIDRKRATSLPRRGPK-SQSSETR-AHSFPSSTLLSDPRGG 438
T DG G D + + + + +A S PRRG + ++SS+TR A P+ T S+ +
Sbjct: 371 TCYCMDGWRGNDCSVFADAIVHVPQAQSPPRRGQEPTESSKTRKAQVKPTPT--SEKKKE 428
Query: 439 ARYPIRPIVSRITI 480
+R +PI++ + +
Sbjct: 429 SRELQKPIIATVQV 442
>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
Length = 2684
Score = 27.9 bits (59), Expect = 5.7
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +1
Query: 265 TLVARDG*FGRDPACLS*STIDRKRATSLPRRGPK-SQSSETR-AHSFPSSTLLSDPRGG 438
T DG G D + + + + +A S PRRG + ++SS+TR A P+ T S+ +
Sbjct: 553 TCYCMDGWRGNDCSVFADAIVHVPQAQSPPRRGQEPTESSKTRKAQVKPTPT--SEKKKE 610
Query: 439 ARYPIRPIVSRITI 480
+R +PI++ + +
Sbjct: 611 SRELQKPIIATVQV 624
>Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical protein
F54D1.6 protein.
Length = 1423
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 367 KSQSSETRAHSFPSSTLLSDPRGGARYPI 453
K +++E R + S + ++ RGG +YPI
Sbjct: 1351 KGEAAERRGYDMASRSSMTGSRGGKKYPI 1379
>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
protein.
Length = 4280
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -2
Query: 427 DLKVVWRKEMNGPGFLSFVTLDPVEEGMWHAYGQLC-FSSSKLDLAQT 287
DL V W+ E +G G + E W YGQL + ++ QT
Sbjct: 917 DLIVKWKSEGDGRGVYGYHVQFRNENSGWKTYGQLVPYVRDNMEYTQT 964
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -2
Query: 427 DLKVVWRKEMNGPGFLSFVTLDPVEEGMWHAYGQLC-FSSSKLDLAQT 287
DL V W+ E +G G + E W YGQL + ++ QT
Sbjct: 917 DLIVKWKSEGDGRGVYGYHVQFRNENSGWKTYGQLVPYVRDNMEYTQT 964
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -2
Query: 427 DLKVVWRKEMNGPGFLSFVTLDPVEEGMWHAYGQLC-FSSSKLDLAQT 287
DL V W+ E +G G + E W YGQL + ++ QT
Sbjct: 917 DLIVKWKSEGDGRGVYGYHVQFRNENSGWKTYGQLVPYVRDNMEYTQT 964
>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
805, isoform a protein.
Length = 4280
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -2
Query: 427 DLKVVWRKEMNGPGFLSFVTLDPVEEGMWHAYGQLC-FSSSKLDLAQT 287
DL V W+ E +G G + E W YGQL + ++ QT
Sbjct: 917 DLIVKWKSEGDGRGVYGYHVQFRNENSGWKTYGQLVPYVRDNMEYTQT 964
>AF164625-1|AAD47816.1| 944|Caenorhabditis elegans
tandem-array-modifier protein protein.
Length = 944
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +1
Query: 349 LPRRGPKSQSSETRAHSFPSSTLLSDPRGGARYPIRPIVSRI 474
LPRRGP+++++E + TL+ Y ++ IV ++
Sbjct: 116 LPRRGPEARATEIKCPECRKPTLVPADGLPVNYRVQEIVQKV 157
>AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array
expression modifierprotein 1 protein.
Length = 944
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +1
Query: 349 LPRRGPKSQSSETRAHSFPSSTLLSDPRGGARYPIRPIVSRI 474
LPRRGP+++++E + TL+ Y ++ IV ++
Sbjct: 116 LPRRGPEARATEIKCPECRKPTLVPADGLPVNYRVQEIVQKV 157
>AC006722-5|AAK68410.3| 703|Caenorhabditis elegans Hypothetical
protein Y19D10A.10 protein.
Length = 703
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 157 LLILACLIFIKIINVIFESGLII**DIIQ 243
+L LACL FI+I VIF +I DI++
Sbjct: 32 VLTLACLTFIQINTVIFNFTVICMEDIVE 60
>AC006645-10|AAF39849.1| 746|Caenorhabditis elegans Hypothetical
protein F56A4.11 protein.
Length = 746
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 157 LLILACLIFIKIINVIFESGLII**DIIQ 243
+L LACL FI+I VIF +I DI++
Sbjct: 32 VLTLACLTFIQINTVIFNFTVICMEDIVE 60
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,086,489
Number of Sequences: 27780
Number of extensions: 284036
Number of successful extensions: 717
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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