Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2374
         (590 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003433-1|AAO39436.1|  634|Drosophila melanogaster SD04308p pro...    31   1.2  
AF435839-1|AAL30824.1|  567|Drosophila melanogaster suppressor o...    31   1.2  
AF435838-1|AAL30823.1|  633|Drosophila melanogaster suppressor o...    31   1.2  
AE014134-2912|AAF53652.2|  633|Drosophila melanogaster CG15154-P...    31   1.2  
AE014134-2911|AAN11183.1|  720|Drosophila melanogaster CG15154-P...    31   1.2  
AJ010298-1|CAA09069.1| 1571|Drosophila melanogaster polyprotein ...    30   2.0  
AE014296-1968|AAN11874.2|  728|Drosophila melanogaster CG11711-P...    30   2.7  
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical...    28   8.2  

>BT003433-1|AAO39436.1|  634|Drosophila melanogaster SD04308p
           protein.
          Length = 634

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 256 QRRRSVINKTSNVYRHHHH 200
           +RRRS  N  SN++ HHHH
Sbjct: 204 RRRRSNSNSRSNIHHHHHH 222


>AF435839-1|AAL30824.1|  567|Drosophila melanogaster suppressor of
           cytokine signalingSOCS36E-II protein.
          Length = 567

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 256 QRRRSVINKTSNVYRHHHH 200
           +RRRS  N  SN++ HHHH
Sbjct: 204 RRRRSNSNSRSNIHHHHHH 222


>AF435838-1|AAL30823.1|  633|Drosophila melanogaster suppressor of
           cytokine signalingSOCS36E protein.
          Length = 633

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 256 QRRRSVINKTSNVYRHHHH 200
           +RRRS  N  SN++ HHHH
Sbjct: 204 RRRRSNSNSRSNIHHHHHH 222


>AE014134-2912|AAF53652.2|  633|Drosophila melanogaster CG15154-PA,
           isoform A protein.
          Length = 633

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 256 QRRRSVINKTSNVYRHHHH 200
           +RRRS  N  SN++ HHHH
Sbjct: 204 RRRRSNSNSRSNIHHHHHH 222


>AE014134-2911|AAN11183.1|  720|Drosophila melanogaster CG15154-PB,
           isoform B protein.
          Length = 720

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 256 QRRRSVINKTSNVYRHHHH 200
           +RRRS  N  SN++ HHHH
Sbjct: 204 RRRRSNSNSRSNIHHHHHH 222


>AJ010298-1|CAA09069.1| 1571|Drosophila melanogaster polyprotein
           protein.
          Length = 1571

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = -2

Query: 301 YNQLIQSL*YLCKFNQRRRSVINKTSNVYRHHHHVIISPQSQSTSLNPVFDSPYP 137
           Y+ +IQ   YL      R+ +     N Y   HH ++ P+S +T L  VF++  P
Sbjct: 760 YDSVIQE--YL-DLKHMRQVLPTHDCNAYYMPHHAVLKPESVTTKLRVVFNASSP 811


>AE014296-1968|AAN11874.2|  728|Drosophila melanogaster CG11711-PA,
           isoform A protein.
          Length = 728

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 3/117 (2%)
 Frame = -2

Query: 487 SYNSRDGATNSTYEFLINIIH*MSLQGNQNIKF*KE*KRNNTYIENYLLTSLKNKFKINN 308
           S +S  G+++S     IN  +    + ++N +       NN Y  NY   + + +    +
Sbjct: 164 SNSSTSGSSHSLSNSCINNHNNTHYRNSKNTRHSSS--NNNDYSGNYNCKTSEQQAWKAS 221

Query: 307 VIYNQLIQSL*YLCKFNQRRRSVINKTSNVYRHHH---HVIISPQSQSTSLNPVFDS 146
                LI    Y         +  N  +N   ++H   H+I+SP SQ+ +   +FDS
Sbjct: 222 AAQQLLISDRNYPSSNTNNTNNNTNNITNSSNNNHSGGHIIMSPTSQAPTRTSLFDS 278


>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
           protein protein.
          Length = 1830

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 217 YRHHHHVIISPQSQSTSLNPVFDSPYP 137
           Y   HH ++ P+S +T L  VF++  P
Sbjct: 837 YHLPHHAVVKPESTTTKLRVVFNASSP 863


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,132,509
Number of Sequences: 53049
Number of extensions: 488162
Number of successful extensions: 1395
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1371
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)