Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2374
(590 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 23 3.0
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 6.8
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 21 9.0
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 9.0
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 9.0
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 9.0
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 9.0
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 9.0
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 9.0
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 9.0
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 9.0
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 21 9.0
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 9.0
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 9.0
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 22.6 bits (46), Expect = 3.0
Identities = 16/68 (23%), Positives = 30/68 (44%)
Frame = -2
Query: 262 FNQRRRSVINKTSNVYRHHHHVIISPQSQSTSLNPVFDSPYPFLASRSSSHHQATKSIYY 83
F +R VI K ++ V I+ + + + V + + AS + SH + + + Y
Sbjct: 151 FGYTKRDVIYKWNSA----RQVAIAEDMKLSQFDLVANPTANYSASTTLSHAEYSMLLVY 206
Query: 82 FSYKMHTG 59
F + H G
Sbjct: 207 FHLQRHMG 214
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.4 bits (43), Expect = 6.8
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -2
Query: 478 SRDGATNSTYEFLINII 428
SR+G+T +EFL+ ++
Sbjct: 452 SREGSTTYLWEFLLKLL 468
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 21.0 bits (42), Expect = 9.0
Identities = 6/27 (22%), Positives = 14/27 (51%)
Frame = -1
Query: 215 PSSPSCYHQPTVPIHITEPSLRLSLSI 135
P P +PT P H+++ +++ +
Sbjct: 250 PPKPQTKTKPTSPYHVSDHKAAITVGV 276
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 88 YYFSYKMH 65
YY SYKMH
Sbjct: 428 YYHSYKMH 435
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 88 YYFSYKMH 65
YY SYKMH
Sbjct: 428 YYHSYKMH 435
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 331 LSSLTNNFQYMYY 369
+SSL+NN++Y Y
Sbjct: 82 ISSLSNNYKYSNY 94
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 331 LSSLTNNFQYMYY 369
+SSL+NN++Y Y
Sbjct: 82 ISSLSNNYKYSNY 94
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 331 LSSLTNNFQYMYY 369
+SSL+NN++Y Y
Sbjct: 82 ISSLSNNYKYSNY 94
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 331 LSSLTNNFQYMYY 369
+SSL+NN++Y Y
Sbjct: 82 ISSLSNNYKYSNY 94
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 331 LSSLTNNFQYMYY 369
+SSL+NN++Y Y
Sbjct: 82 ISSLSNNYKYSNY 94
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 331 LSSLTNNFQYMYY 369
+SSL+NN++Y Y
Sbjct: 82 ISSLSNNYKYSNY 94
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 331 LSSLTNNFQYMYY 369
+SSL+NN++Y Y
Sbjct: 82 ISSLSNNYKYSNY 94
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 331 LSSLTNNFQYMYY 369
+SSL+NN++Y Y
Sbjct: 82 ISSLSNNYKYSNY 94
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 331 LSSLTNNFQYMYY 369
+SSL+NN++Y Y
Sbjct: 82 ISSLSNNYKYSNY 94
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 331 LSSLTNNFQYMYY 369
+SSL+NN++Y Y
Sbjct: 82 ISSLSNNYKYSNY 94
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 331 LSSLTNNFQYMYY 369
+SSL+NN++Y Y
Sbjct: 82 ISSLSNNYKYSNY 94
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 331 LSSLTNNFQYMYY 369
+SSL+NN++Y Y
Sbjct: 82 ISSLSNNYKYSNY 94
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 331 LSSLTNNFQYMYY 369
+SSL+NN++Y Y
Sbjct: 82 ISSLSNNYKYSNY 94
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 331 LSSLTNNFQYMYY 369
+SSL+NN++Y Y
Sbjct: 82 ISSLSNNYKYSNY 94
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 331 LSSLTNNFQYMYY 369
+SSL+NN++Y Y
Sbjct: 315 ISSLSNNYKYSNY 327
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 331 LSSLTNNFQYMYY 369
+SSL+NN++Y Y
Sbjct: 315 ISSLSNNYKYSNY 327
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,989
Number of Sequences: 438
Number of extensions: 3889
Number of successful extensions: 37
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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