Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2371
(703 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7QCL6 Cluster: ENSANGP00000010850; n=1; Anopheles gamb... 50 7e-05
UniRef50_UPI0000DB7B0B Cluster: PREDICTED: similar to ATP-depend... 43 0.008
UniRef50_O94395 Cluster: Protein Ku70; n=1; Schizosaccharomyces ... 40 0.045
UniRef50_A7RH48 Cluster: Predicted protein; n=1; Nematostella ve... 40 0.078
UniRef50_Q24CC2 Cluster: Transporter, cation channel family prot... 36 0.96
UniRef50_P12956 Cluster: ATP-dependent DNA helicase 2 subunit 1;... 36 1.3
UniRef50_UPI0000D569CB Cluster: PREDICTED: similar to Yolk prote... 35 2.2
UniRef50_Q4UG83 Cluster: Putative uncharacterized protein; n=2; ... 34 2.9
UniRef50_Q4LBE8 Cluster: Ku70-like protein; n=2; Paramecium tetr... 34 2.9
UniRef50_Q8ETK3 Cluster: ABC transporter ATP-binding protein; n=... 33 5.1
UniRef50_Q6CCK2 Cluster: Protein Ku70; n=1; Yarrowia lipolytica|... 33 5.1
UniRef50_Q73HF3 Cluster: UDP-N-acetylglucosamine pyrophosphoryla... 33 6.8
UniRef50_A3LS37 Cluster: Predicted protein; n=5; Saccharomycetal... 33 6.8
UniRef50_Q9VR32 Cluster: CG15627-PA; n=3; Pancrustacea|Rep: CG15... 33 9.0
UniRef50_Q55F81 Cluster: Putative uncharacterized protein; n=1; ... 33 9.0
UniRef50_Q5ABZ3 Cluster: Putative uncharacterized protein MNN45;... 33 9.0
>UniRef50_Q7QCL6 Cluster: ENSANGP00000010850; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000010850 - Anopheles gambiae
str. PEST
Length = 498
Score = 49.6 bits (113), Expect = 7e-05
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Frame = +2
Query: 362 AKELRLSDALWYCNKMFNSCTKTLSSQTIILLSRLDTP--PLSEDETPTFDRIVELNNSE 535
A+ +S+ LW C++MF+ C L+ TI+L + D P S + + +L E
Sbjct: 90 AQGTSMSNVLWLCSRMFSHCGYKLAQSTIVLFTSNDQPHDSSSSEYQQALVKARDLQQKE 149
Query: 536 IILKLINLSDSEYEIHQFYKDLLFEVNKNSL 628
I ++L+ +S S +E +FYK+ L V + L
Sbjct: 150 IFVELVPMSGS-FECGKFYKEFLCTVLEEEL 179
>UniRef50_UPI0000DB7B0B Cluster: PREDICTED: similar to ATP-dependent
DNA helicase 2 subunit 1 (ATP-dependent DNA helicase II
70 kDa subunit) (Ku autoantigen protein p70 homolog)
(Ku70) (CTC box-binding factor 75 kDa subunit) (CTCBF)
(CTC75) (DNA-repair protein XRCC6), partial; n=1; Apis
mellifera|Rep: PREDICTED: similar to ATP-dependent DNA
helicase 2 subunit 1 (ATP-dependent DNA helicase II 70
kDa subunit) (Ku autoantigen protein p70 homolog) (Ku70)
(CTC box-binding factor 75 kDa subunit) (CTCBF) (CTC75)
(DNA-repair protein XRCC6), partial - Apis mellifera
Length = 399
Score = 42.7 bits (96), Expect = 0.008
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +2
Query: 377 LSDALWYCNKMFNSCTKTLSSQTIILLSRLDTPPLSEDETPTFDRIVELNNSEIILKLIN 556
L D LWY + F++ T+ + IIL + D PP+ +D R+ + S+I ++L
Sbjct: 19 LHDVLWYATRAFSTVHITMPMRRIILFTCQDNPPIIDDNEKHRIRVKATSYSDINVQLSV 78
Query: 557 LSDSEYEIHQ-FYKDL 601
+ E H FYKDL
Sbjct: 79 IGLGENWNHDLFYKDL 94
>UniRef50_O94395 Cluster: Protein Ku70; n=1; Schizosaccharomyces
pombe|Rep: Protein Ku70 - Schizosaccharomyces pombe
(Fission yeast)
Length = 607
Score = 40.3 bits (90), Expect = 0.045
Identities = 44/204 (21%), Positives = 86/204 (42%), Gaps = 17/204 (8%)
Frame = +2
Query: 53 MDSDIEVEECEEFSYRGNAGTIILINV----YDPLSCKFP---QIAHVATCQALKHYLRT 211
M++D +++E E F+ G + +I V DP+ P Q+A + Q + T
Sbjct: 1 MENDEQIDETENFAI-GKYAILFVIEVSPSMLDPVDEFTPSSLQMALICAYQLAAQRVIT 59
Query: 212 STSHNVGVGLYGIDDPTSNIKNVLEVMPLAPPNMDDYXXXXXXXXXXXXQAKELR----- 376
+ S +GV LYG + T N + ++ + PP+ + ++ +
Sbjct: 60 NPSDIMGVLLYGTESSTGRFANQMMLLDIDPPDAERIKSLQSFEKDFQFSKEKFKPCSCQ 119
Query: 377 --LSDALWYCNKMFNSCTKTLSSQTIILLSRLDTPPLSEDETP-TFDRIVELNNSEIILK 547
LS L++C+ +F + + + + L++ D P E R +L + +I +
Sbjct: 120 VSLSSVLYHCSVIFTTKAENFEKR-LFLITDNDHPAWDATERDIILQRAKDLRDLDIQVH 178
Query: 548 LINLS--DSEYEIHQFYKDLLFEV 613
+ L + I+ FY D L+ V
Sbjct: 179 PVFLDPPTHSFRINIFYSDFLYIV 202
>UniRef50_A7RH48 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 607
Score = 39.5 bits (88), Expect = 0.078
Identities = 22/87 (25%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Frame = +2
Query: 377 LSDALWYCNKMFNSCTKTLSSQTIILLSRLDTPPLSE--DETPTFDRIVELNNSEIILKL 550
LSD LW C+ +F+ CT+ +S + I+L + D P + + + + +L I ++L
Sbjct: 140 LSDVLWTCSNIFSQCTQKVSHKRIMLFTNCDHPHIDDLHLQKRAKTKAEDLREVGINIEL 199
Query: 551 INL--SDSEYEIHQFYKDL-LFEVNKN 622
+++ + ++ FY+D+ +FE +++
Sbjct: 200 LSMLPAGGSFDPSAFYQDIVVFEEDED 226
>UniRef50_Q24CC2 Cluster: Transporter, cation channel family
protein; n=1; Tetrahymena thermophila SB210|Rep:
Transporter, cation channel family protein - Tetrahymena
thermophila SB210
Length = 2116
Score = 35.9 bits (79), Expect = 0.96
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +2
Query: 512 IVELNNSEIILKLINLSDSEYEIHQFYKDLLFEV-NKNSLPKSVL 643
+++ NN EII KLI+ +DS E FY DLL + K + P+ +L
Sbjct: 792 LMQKNNLEIIQKLIDQTDSYLEFSTFYHDLLTSLKEKETFPQPLL 836
>UniRef50_P12956 Cluster: ATP-dependent DNA helicase 2 subunit 1;
n=45; Euteleostomi|Rep: ATP-dependent DNA helicase 2
subunit 1 - Homo sapiens (Human)
Length = 609
Score = 35.5 bits (78), Expect = 1.3
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +2
Query: 377 LSDALWYCNKMFNSCTKTLSSQTIILLSRLDTPPLSEDETPTFDRIV--ELNNSEIILKL 550
LS+ LW C +F+ +S + I+L + D P ++ + R +L ++ I L L
Sbjct: 143 LSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGNDSAKASRARTKAGDLRDTGIFLDL 202
Query: 551 INL-SDSEYEIHQFYKDLL 604
++L ++I FY+D++
Sbjct: 203 MHLKKPGGFDISLFYRDII 221
>UniRef50_UPI0000D569CB Cluster: PREDICTED: similar to Yolk protein
factor 1 beta subunit (ATP-dependent helicase Irbp)
(Inverted repeat-binding protein); n=1; Tribolium
castaneum|Rep: PREDICTED: similar to Yolk protein factor
1 beta subunit (ATP-dependent helicase Irbp) (Inverted
repeat-binding protein) - Tribolium castaneum
Length = 512
Score = 34.7 bits (76), Expect = 2.2
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Frame = +2
Query: 371 LRLSDALWYCNKMFNSCTKTLSSQTIILLSRLDTPPLSEDETPTFDRIVELNN---SEII 541
L LS +C K F +TII ++ D P+ D+ F + E N ++I
Sbjct: 119 LNLSSFFLFCKKKFKEVNSVFYKRTIIFITN-DDNPVRGDKNQRFAALNEAKNFESNDIT 177
Query: 542 LKLINLSDS-EYEIHQFYKDLLFEVNKNSLPKSVLEN 649
+L+ + + +Y+I FY + LF + K+ ++V+E+
Sbjct: 178 FELVTMKPNFDYKI--FYNE-LFSIIKSPPVETVVED 211
>UniRef50_Q4UG83 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 929
Score = 34.3 bits (75), Expect = 2.9
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +2
Query: 464 LDTPPLSEDETPTFDRIVELNNSEIILKLINLSDSEYEIHQFYKDLLFEVNKNSLPKS 637
LDTP ED+ F I N+E++ + +L +++ +Y+ L+ +NKN +PK+
Sbjct: 49 LDTP---EDDNSWFKHIKVCKNTELLEESCSLYPKYWKV--YYRHALYYINKNDMPKA 101
>UniRef50_Q4LBE8 Cluster: Ku70-like protein; n=2; Paramecium
tetraurelia|Rep: Ku70-like protein - Paramecium
tetraurelia
Length = 603
Score = 34.3 bits (75), Expect = 2.9
Identities = 31/160 (19%), Positives = 66/160 (41%), Gaps = 8/160 (5%)
Frame = +2
Query: 191 LKHYLRTSTSHNVGVGLYGIDDPTSNIK--NVLEVMPLAPPNMD---DYXXXXXXXXXXX 355
+K + +S +G+ Y + +K N+ E+ L P+ D +
Sbjct: 74 MKAKIISSPDDRIGMIFYNTKSTNNQLKFNNITEIYKLDGPSADIIKNCLKIEQNFEKDY 133
Query: 356 XQAKELRLSDALWYCNKMFNSCTKTLSSQTIILLSRLDTPPLSE--DETPTFDRIVELNN 529
+ LW CN F K + I L + D P + + +L +
Sbjct: 134 QLGNNAHFHECLWLCNHEFKELDKNKFNMRIFLFTPDDLPYFKDVNARSSALKYAKQLKD 193
Query: 530 SEIILKLINL-SDSEYEIHQFYKDLLFEVNKNSLPKSVLE 646
+++ ++L L S +E++I +FY +++ V+ + + +VL+
Sbjct: 194 ADVQIELFPLPSQNEFKIARFYGEII-TVDLDEVNNAVLD 232
>UniRef50_Q8ETK3 Cluster: ABC transporter ATP-binding protein; n=1;
Oceanobacillus iheyensis|Rep: ABC transporter
ATP-binding protein - Oceanobacillus iheyensis
Length = 589
Score = 33.5 bits (73), Expect = 5.1
Identities = 24/73 (32%), Positives = 33/73 (45%)
Frame = +2
Query: 401 NKMFNSCTKTLSSQTIILLSRLDTPPLSEDETPTFDRIVELNNSEIILKLINLSDSEYEI 580
NKM T T + Q+ I S L E+E P F N+ ++ N+S S I
Sbjct: 308 NKM---ATITNTIQSTIAASERIFELLDEEEKPIFSGQATKYNANAFIQFENVSFSYNNI 364
Query: 581 HQFYKDLLFEVNK 619
H KD+ E+NK
Sbjct: 365 HSTIKDIHLEINK 377
>UniRef50_Q6CCK2 Cluster: Protein Ku70; n=1; Yarrowia
lipolytica|Rep: Protein Ku70 - Yarrowia lipolytica
(Candida lipolytica)
Length = 585
Score = 33.5 bits (73), Expect = 5.1
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Frame = +2
Query: 365 KELRLSDALWYCNKMFNSCTKTLSSQTIILLSRLDTPPLSEDE-TPTFDRIVELNNSEII 541
+E L D + N+ F + +S+ II ++ DTP +ED+ T RI +L++ ++
Sbjct: 123 EEPHLMDVFFDMNRHFINMAPNFASRRIIYITDDDTPTTNEDDINKTRVRIEDLSHLKVK 182
Query: 542 LK--LINLS-DSEYEIHQFYKDLLFEVNKNSLPKSVLE 646
++ LIN S D ++ +FY L+F + + P ++
Sbjct: 183 VEPLLINPSEDKTFDSSKFYA-LVFNEDTSVEPVEAID 219
>UniRef50_Q73HF3 Cluster: UDP-N-acetylglucosamine
pyrophosphorylase-related protein; n=3; Wolbachia|Rep:
UDP-N-acetylglucosamine pyrophosphorylase-related
protein - Wolbachia pipientis wMel
Length = 253
Score = 33.1 bits (72), Expect = 6.8
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 431 LSSQTIILLSRLDTPPLSEDETPTFDRIVELNNSEIILKLINLSDSEY 574
LS Q I+L+ DTP +S D ++ NN ++L N D +Y
Sbjct: 100 LSDQDIVLIQYGDTPFISSDTVMRMTDCLKCNNKNLVLLGFNSQDKQY 147
>UniRef50_A3LS37 Cluster: Predicted protein; n=5;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 907
Score = 33.1 bits (72), Expect = 6.8
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +2
Query: 155 FPQIAHVATCQALKHYLRTSTSHNVGVGLYGIDDPTSNIKNVLEVMPLAPPNMD 316
FP AH AT Q L+ +T T + + LY ++D T K V+ +P + P+++
Sbjct: 780 FPVFAHTATLQNLRLPPKTPTDY-LTDALYALEDLTFEKKLVISALPSSNPSVE 832
>UniRef50_Q9VR32 Cluster: CG15627-PA; n=3; Pancrustacea|Rep:
CG15627-PA - Drosophila melanogaster (Fruit fly)
Length = 929
Score = 32.7 bits (71), Expect = 9.0
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = +2
Query: 374 RLSDALWYCNKMFNSCTKTLSSQTIILLSRLDTPPLSEDETPTFDRIV--ELNNSEIILK 547
RL A W+ + T + + +SRLDTP S D+ +I+ LN S +
Sbjct: 617 RLVAATWWLFGFIIIASYTANLAAFLTVSRLDTPVESLDDLAKQYKILYAPLNGSSAMTY 676
Query: 548 LINLSDSEYEIHQFYKDLLFEVNKNSLPKSVL 643
+S+ E ++ +KDL + ++ +S L
Sbjct: 677 FERMSNIEQMFYEIWKDLSLNDSLTAVERSKL 708
>UniRef50_Q55F81 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1758
Score = 32.7 bits (71), Expect = 9.0
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = -3
Query: 656 IFNFPKLILAMSFYLPQIANLYKIDEFHIQSQTN*LI*ELSQNYSIQQFYQML 498
+ N K LA S+ ++AN+Y I FH QS TN I E +Q Y F +++
Sbjct: 679 LLNCDKSRLARSYLFDELANVYMISPFH-QSVTN-SIGEYAQRYFQNDFIELV 729
>UniRef50_Q5ABZ3 Cluster: Putative uncharacterized protein MNN45;
n=1; Candida albicans|Rep: Putative uncharacterized
protein MNN45 - Candida albicans (Yeast)
Length = 872
Score = 32.7 bits (71), Expect = 9.0
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +2
Query: 506 DRIVELNNSEIILKLINLSDSEYEIHQFYKDLLFEVNKNSLPKSVLE 646
D+I++L N+E IL+ L+ S H F K +LF+ N N P +++
Sbjct: 795 DQILKLLNNEEILQEYYLTRSLTRFHDFEKQVLFDDNGNDKPLDLVK 841
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,722,727
Number of Sequences: 1657284
Number of extensions: 11299334
Number of successful extensions: 28226
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 27174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28219
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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