Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2371
         (703 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    21   7.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.4  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   9.7  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   9.7  

>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +2

Query: 521 LNNSEIILKLINLSDSEYEIHQFYKDLLFEVN 616
           L +S  I + I   +++   H F KD+ +  N
Sbjct: 112 LYSSYEITRFIRSRETDVYTHNFVKDIFYPAN 143


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/31 (25%), Positives = 14/31 (45%)
 Frame = +3

Query: 555 ICLTLNMKFINFIKICYLR*IKTHCQNQFWK 647
           I +T  + F+  + I +      HC N  W+
Sbjct: 132 IFITCELFFVILLWISFFLNFMLHCNNTTWR 162


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 579 ISYSESDKLINLRIISELFNSTI 511
           IS+ +SD    LR   E+F+S +
Sbjct: 77  ISFKDSDLQQKLRYFEEVFSSLL 99


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 579 ISYSESDKLINLRIISELFNSTI 511
           IS+ +SD    LR   E+F+S +
Sbjct: 77  ISFKDSDLQQKLRYFEEVFSSLL 99


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,258
Number of Sequences: 336
Number of extensions: 3360
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)