Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2371
(703 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC126.02c |pku70||Ku domain protein Pku70|Schizosaccharomyces ... 40 3e-04
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 29 0.85
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 29 0.85
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 29 0.85
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 29 0.85
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 29 0.85
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 29 0.85
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 29 0.85
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 29 0.85
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 29 0.85
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 29 0.85
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 29 0.85
SPCC1322.12c |bub1||serine/threonine protein kinase Bub1|Schizos... 27 3.4
SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity ... 27 3.4
SPAC14C4.05c |mug61||Sad1 interacting factor|Schizosaccharomyces... 27 3.4
SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces pombe... 26 6.0
SPCC1620.08 |||succinate-CoA ligase |Schizosaccharomyces pombe|c... 26 6.0
SPBC19F5.03 |||inositol polyphosphate phosphatase |Schizosacchar... 26 6.0
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 7.9
SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces pomb... 25 7.9
>SPCC126.02c |pku70||Ku domain protein Pku70|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 607
Score = 40.3 bits (90), Expect = 3e-04
Identities = 44/204 (21%), Positives = 86/204 (42%), Gaps = 17/204 (8%)
Frame = +2
Query: 53 MDSDIEVEECEEFSYRGNAGTIILINV----YDPLSCKFP---QIAHVATCQALKHYLRT 211
M++D +++E E F+ G + +I V DP+ P Q+A + Q + T
Sbjct: 1 MENDEQIDETENFAI-GKYAILFVIEVSPSMLDPVDEFTPSSLQMALICAYQLAAQRVIT 59
Query: 212 STSHNVGVGLYGIDDPTSNIKNVLEVMPLAPPNMDDYXXXXXXXXXXXXQAKELR----- 376
+ S +GV LYG + T N + ++ + PP+ + ++ +
Sbjct: 60 NPSDIMGVLLYGTESSTGRFANQMMLLDIDPPDAERIKSLQSFEKDFQFSKEKFKPCSCQ 119
Query: 377 --LSDALWYCNKMFNSCTKTLSSQTIILLSRLDTPPLSEDETP-TFDRIVELNNSEIILK 547
LS L++C+ +F + + + + L++ D P E R +L + +I +
Sbjct: 120 VSLSSVLYHCSVIFTTKAENFEKR-LFLITDNDHPAWDATERDIILQRAKDLRDLDIQVH 178
Query: 548 LINLS--DSEYEIHQFYKDLLFEV 613
+ L + I+ FY D L+ V
Sbjct: 179 PVFLDPPTHSFRINIFYSDFLYIV 202
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 0.85
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Frame = +2
Query: 431 LSSQTIILLSRLDTPPLSEDETPTFDRIVELNNSEIILKLIN-----LSDSEY-EIHQFY 592
+S +T L+ + + P + T +D +E+++S+ L +N + + E +I++ +
Sbjct: 322 ISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQMNKVSNIVKEPELPDIYKEF 381
Query: 593 KDLLFEVNKNSLPKSV 640
KD+ E N LPK +
Sbjct: 382 KDITAETNTEKLPKPI 397
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 0.85
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Frame = +2
Query: 431 LSSQTIILLSRLDTPPLSEDETPTFDRIVELNNSEIILKLIN-----LSDSEY-EIHQFY 592
+S +T L+ + + P + T +D +E+++S+ L +N + + E +I++ +
Sbjct: 322 ISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQMNKVSNIVKEPELPDIYKEF 381
Query: 593 KDLLFEVNKNSLPKSV 640
KD+ E N LPK +
Sbjct: 382 KDITAETNTEKLPKPI 397
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 0.85
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Frame = +2
Query: 431 LSSQTIILLSRLDTPPLSEDETPTFDRIVELNNSEIILKLIN-----LSDSEY-EIHQFY 592
+S +T L+ + + P + T +D +E+++S+ L +N + + E +I++ +
Sbjct: 322 ISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQMNKVSNIVKEPELPDIYKEF 381
Query: 593 KDLLFEVNKNSLPKSV 640
KD+ E N LPK +
Sbjct: 382 KDITAETNTEKLPKPI 397
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 0.85
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Frame = +2
Query: 431 LSSQTIILLSRLDTPPLSEDETPTFDRIVELNNSEIILKLIN-----LSDSEY-EIHQFY 592
+S +T L+ + + P + T +D +E+++S+ L +N + + E +I++ +
Sbjct: 322 ISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQMNKVSNIVKEPELPDIYKEF 381
Query: 593 KDLLFEVNKNSLPKSV 640
KD+ E N LPK +
Sbjct: 382 KDITAETNTEKLPKPI 397
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 0.85
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Frame = +2
Query: 431 LSSQTIILLSRLDTPPLSEDETPTFDRIVELNNSEIILKLIN-----LSDSEY-EIHQFY 592
+S +T L+ + + P + T +D +E+++S+ L +N + + E +I++ +
Sbjct: 322 ISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQMNKVSNIVKEPELPDIYKEF 381
Query: 593 KDLLFEVNKNSLPKSV 640
KD+ E N LPK +
Sbjct: 382 KDITAETNTEKLPKPI 397
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 0.85
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Frame = +2
Query: 431 LSSQTIILLSRLDTPPLSEDETPTFDRIVELNNSEIILKLIN-----LSDSEY-EIHQFY 592
+S +T L+ + + P + T +D +E+++S+ L +N + + E +I++ +
Sbjct: 322 ISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQMNKVSNIVKEPELPDIYKEF 381
Query: 593 KDLLFEVNKNSLPKSV 640
KD+ E N LPK +
Sbjct: 382 KDITAETNTEKLPKPI 397
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 0.85
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Frame = +2
Query: 431 LSSQTIILLSRLDTPPLSEDETPTFDRIVELNNSEIILKLIN-----LSDSEY-EIHQFY 592
+S +T L+ + + P + T +D +E+++S+ L +N + + E +I++ +
Sbjct: 322 ISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQMNKVSNIVKEPELPDIYKEF 381
Query: 593 KDLLFEVNKNSLPKSV 640
KD+ E N LPK +
Sbjct: 382 KDITAETNTEKLPKPI 397
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 0.85
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Frame = +2
Query: 431 LSSQTIILLSRLDTPPLSEDETPTFDRIVELNNSEIILKLIN-----LSDSEY-EIHQFY 592
+S +T L+ + + P + T +D +E+++S+ L +N + + E +I++ +
Sbjct: 322 ISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQMNKVSNIVKEPELPDIYKEF 381
Query: 593 KDLLFEVNKNSLPKSV 640
KD+ E N LPK +
Sbjct: 382 KDITAETNTEKLPKPI 397
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 0.85
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Frame = +2
Query: 431 LSSQTIILLSRLDTPPLSEDETPTFDRIVELNNSEIILKLIN-----LSDSEY-EIHQFY 592
+S +T L+ + + P + T +D +E+++S+ L +N + + E +I++ +
Sbjct: 322 ISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQMNKVSNIVKEPELPDIYKEF 381
Query: 593 KDLLFEVNKNSLPKSV 640
KD+ E N LPK +
Sbjct: 382 KDITAETNTEKLPKPI 397
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 0.85
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Frame = +2
Query: 431 LSSQTIILLSRLDTPPLSEDETPTFDRIVELNNSEIILKLIN-----LSDSEY-EIHQFY 592
+S +T L+ + + P + T +D +E+++S+ L +N + + E +I++ +
Sbjct: 322 ISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQMNKVSNIVKEPELPDIYKEF 381
Query: 593 KDLLFEVNKNSLPKSV 640
KD+ E N LPK +
Sbjct: 382 KDITAETNTEKLPKPI 397
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 0.85
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Frame = +2
Query: 431 LSSQTIILLSRLDTPPLSEDETPTFDRIVELNNSEIILKLIN-----LSDSEY-EIHQFY 592
+S +T L+ + + P + T +D +E+++S+ L +N + + E +I++ +
Sbjct: 322 ISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQMNKVSNIVKEPELPDIYKEF 381
Query: 593 KDLLFEVNKNSLPKSV 640
KD+ E N LPK +
Sbjct: 382 KDITAETNTEKLPKPI 397
>SPCC1322.12c |bub1||serine/threonine protein kinase
Bub1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1044
Score = 26.6 bits (56), Expect = 3.4
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 476 PLSEDETPTFDRIVELNNSEIILKLINLSDSEYEIHQFYKDLLFEVNKNSL 628
P ++DE P + + E + L NL + Q +DLLF+V + SL
Sbjct: 609 PKNDDELPGPSGYLTMPYEEAMASLSNLPTLINPLDQSLRDLLFQVLRPSL 659
>SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 476 PLSEDETPTFDRIVELNNSEIILKLINLSDS 568
PLSE E TF RIV+ I+ KL N +S
Sbjct: 163 PLSEAEECTFVRIVDFGAELIVHKLENYLES 193
>SPAC14C4.05c |mug61||Sad1 interacting factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 844
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +1
Query: 133 IRSPIV*IPTNCACCNMSGTQTLSTYIYFA*CRCWLIW 246
+R + PTNC S T +L Y+ A CW I+
Sbjct: 675 VRGALSKFPTNCLRSVYSHTVSLMKYLTSAVISCWRIY 712
>SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 727
Score = 25.8 bits (54), Expect = 6.0
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 413 NSCTKTLSSQTIILLSRLDTP-PLSEDETPTFDRIVELNNSEIILKLINLSDSE 571
NS T T+ + L+ D P SEDE ++++EL++ E I + N S+ +
Sbjct: 372 NSETITVDPEGNWKLNTFDEPVESSEDEFVPKEKVIELSDGEGISTMANKSNDQ 425
>SPCC1620.08 |||succinate-CoA ligase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 433
Score = 25.8 bits (54), Expect = 6.0
Identities = 28/121 (23%), Positives = 46/121 (38%), Gaps = 1/121 (0%)
Frame = +2
Query: 212 STSHNVGVGLYGIDDPTSNIKNVLEVMPLAPPNMDDYXXXXXXXXXXXXQAKELRLSDAL 391
S V + ++P++ IK L PN+D + + + + DA+
Sbjct: 155 SDQGGVDIETVAAENPSAIIKRSLP----NSPNLDPHIAEELVDKLGFSSSSKPKAVDAI 210
Query: 392 WYCNKMFNSCTKTLSSQTIILLSRLDTPPLSEDETPTFDRIVELNNSEI-ILKLINLSDS 568
K+FN C T + L D L D FD E +S I +L+ I+ D
Sbjct: 211 VKLYKVFNDCDAT-QVEINPLAETTDHKVLCMDAKLNFDDNAEFRHSNIFVLRDISQEDP 269
Query: 569 E 571
+
Sbjct: 270 D 270
>SPBC19F5.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 25.8 bits (54), Expect = 6.0
Identities = 8/34 (23%), Positives = 19/34 (55%)
Frame = +2
Query: 503 FDRIVELNNSEIILKLINLSDSEYEIHQFYKDLL 604
FD + + ++++ L+N E I Q Y++++
Sbjct: 281 FDEQISIYGDQVVVNLVNCKGHELPIKQLYENVI 314
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.4 bits (53), Expect = 7.9
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Frame = +2
Query: 164 IAHVATCQALKHYLRTSTSHNV-GVGLY-----GIDDPTSNIKNVLEVMPLAP 304
++ + ++ KH L T T + GL GI++ SN++N+L V+P P
Sbjct: 3492 LSEIKHLKSRKHLLLTETFKTLKAFGLQYRVKAGIEENLSNLRNLLAVIPTFP 3544
>SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1328
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 690 DGSHSLRITLEHLQFSKTD 634
DG+H LRIT L+F+ D
Sbjct: 438 DGTHLLRITFRDLEFNDED 456
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,678,327
Number of Sequences: 5004
Number of extensions: 53003
Number of successful extensions: 156
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 156
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 325165428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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