Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2371
(703 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 28 0.33
EF519508-1|ABP73571.1| 250|Anopheles gambiae APL2 protein. 24 4.0
EF519524-1|ABP73587.1| 250|Anopheles gambiae APL2 protein. 23 7.0
EF519520-1|ABP73583.1| 250|Anopheles gambiae APL2 protein. 23 7.0
EF519517-1|ABP73580.1| 250|Anopheles gambiae APL2 protein. 23 7.0
EF519514-1|ABP73577.1| 250|Anopheles gambiae APL2 protein. 23 7.0
EF519513-1|ABP73576.1| 250|Anopheles gambiae APL2 protein. 23 7.0
EF519512-1|ABP73575.1| 250|Anopheles gambiae APL2 protein. 23 7.0
EF519510-1|ABP73573.1| 250|Anopheles gambiae APL2 protein. 23 7.0
EF519509-1|ABP73572.1| 250|Anopheles gambiae APL2 protein. 23 7.0
EF519507-1|ABP73570.1| 250|Anopheles gambiae APL2 protein. 23 7.0
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 27.9 bits (59), Expect = 0.33
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 351 LSNKQKN*DCQMRYGTAIKCLIVVQKHYPLKLLFYCQDLIHHLCLRMKHQ 500
L K + D +RY TA++ L + + + L H+ LR+KH+
Sbjct: 940 LEGKNRERDELIRYSTALRDLTQMMRDIRKSRFSHLHKLTTHMALRVKHK 989
>EF519508-1|ABP73571.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 24.2 bits (50), Expect = 4.0
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 422 TKTLSSQTIILLSRLDTPPLSEDETPTFDRIVELNNS 532
T T S+ +ILL S DE P FD+++ L+ S
Sbjct: 174 TATNGSE-LILLKLAHNKLTSVDEVPVFDKLITLDLS 209
>EF519524-1|ABP73587.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 23.4 bits (48), Expect = 7.0
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 422 TKTLSSQTIILLSRLDTPPLSEDETPTFDRIVELNNS 532
T T S+ +ILL S DE P FD+++ L+ S
Sbjct: 174 TATNGSE-LILLKLPHNKLTSVDEVPVFDKLITLDLS 209
>EF519520-1|ABP73583.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 23.4 bits (48), Expect = 7.0
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 422 TKTLSSQTIILLSRLDTPPLSEDETPTFDRIVELNNS 532
T T S+ +ILL S DE P FD+++ L+ S
Sbjct: 174 TATNGSE-LILLKLPHNKLTSVDEVPVFDKLITLDLS 209
>EF519517-1|ABP73580.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 23.4 bits (48), Expect = 7.0
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 422 TKTLSSQTIILLSRLDTPPLSEDETPTFDRIVELNNS 532
T T S+ +ILL S DE P FD+++ L+ S
Sbjct: 174 TATNGSE-LILLKLPHNKLTSVDEVPVFDKLITLDLS 209
>EF519514-1|ABP73577.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 23.4 bits (48), Expect = 7.0
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 422 TKTLSSQTIILLSRLDTPPLSEDETPTFDRIVELNNS 532
T T S+ +ILL S DE P FD+++ L+ S
Sbjct: 174 TATNGSE-LILLKLPHNKLTSVDEVPVFDKLITLDLS 209
>EF519513-1|ABP73576.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 23.4 bits (48), Expect = 7.0
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 422 TKTLSSQTIILLSRLDTPPLSEDETPTFDRIVELNNS 532
T T S+ +ILL S DE P FD+++ L+ S
Sbjct: 174 TATNGSE-LILLKLPHNKLTSVDEVPVFDKLITLDLS 209
>EF519512-1|ABP73575.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 23.4 bits (48), Expect = 7.0
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 422 TKTLSSQTIILLSRLDTPPLSEDETPTFDRIVELNNS 532
T T S+ +ILL S DE P FD+++ L+ S
Sbjct: 174 TATNGSE-LILLKLPHNKLTSVDEVPVFDKLITLDLS 209
>EF519510-1|ABP73573.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 23.4 bits (48), Expect = 7.0
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 422 TKTLSSQTIILLSRLDTPPLSEDETPTFDRIVELNNS 532
T T S+ +ILL S DE P FD+++ L+ S
Sbjct: 174 TATNGSE-LILLKLPHNKLTSVDEVPVFDKLITLDLS 209
>EF519509-1|ABP73572.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 23.4 bits (48), Expect = 7.0
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 422 TKTLSSQTIILLSRLDTPPLSEDETPTFDRIVELNNS 532
T T S+ +ILL S DE P FD+++ L+ S
Sbjct: 174 TATNGSE-LILLKLPHNKLTSVDEVPVFDKLITLDLS 209
>EF519507-1|ABP73570.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 23.4 bits (48), Expect = 7.0
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 422 TKTLSSQTIILLSRLDTPPLSEDETPTFDRIVELNNS 532
T T S+ +ILL S DE P FD+++ L+ S
Sbjct: 174 TATNGSE-LILLKLPHNKLTSVDEVPVFDKLITLDLS 209
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,622
Number of Sequences: 2352
Number of extensions: 13394
Number of successful extensions: 30
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -