Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2370
(594 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 136 2e-34
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 101 7e-24
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 80 1e-17
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 77 1e-16
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 76 2e-16
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 66 2e-13
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 60 2e-11
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 58 5e-11
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 58 5e-11
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 58 5e-11
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 55 5e-10
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 55 6e-10
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 54 1e-09
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 50 1e-08
U15954-1|AAA67442.1| 53|Apis mellifera abaecin precursor protein. 25 0.56
AF442147-1|AAL35348.1| 33|Apis mellifera abaecin precursor pro... 25 0.74
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 2.3
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 2.3
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 22 3.9
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 22 5.2
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 21 6.9
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 9.1
AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced prot... 21 9.1
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 136 bits (329), Expect = 2e-34
Identities = 60/100 (60%), Positives = 73/100 (73%), Gaps = 1/100 (1%)
Frame = +3
Query: 225 VPRWRSGIPATLNYIPLDAPYEPSPKLTPYPSFEGNELGNCQTGLTTVYRVKADQCDRLW 404
VPRWR+GIPATL YI LD SPKLTPYP++ N+ G C + +TT YR+ AD CDRLW
Sbjct: 83 VPRWRNGIPATLTYISLDTNRGGSPKLTPYPNWAQNKAGACGSAITTAYRIHADSCDRLW 142
Query: 405 VLDVGTYGYDNVT-NVCPYTLNVFDLNTDQIIRKYVLRPE 521
VLD GT G N T CPYTLN+FDL +D+++R+Y LR E
Sbjct: 143 VLDTGTIGIGNTTIQACPYTLNIFDLTSDKLLRQYRLRAE 182
Score = 67.3 bits (157), Expect = 1e-13
Identities = 30/49 (61%), Positives = 35/49 (71%)
Frame = +2
Query: 77 LQEIFSWNAVDWNYPDQFSKQQALRTGALIPENALPVGIERWRNKLFVS 223
L E F W +D+ YPD+ SK A+ G IPENALPVGIE WRNKLFV+
Sbjct: 34 LLERFFWRTLDYAYPDEASKTMAMMKGEYIPENALPVGIEIWRNKLFVT 82
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 101 bits (241), Expect = 7e-24
Identities = 45/101 (44%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Frame = +3
Query: 225 VPRWRSGIPATLNYIPLDAPYEPSPKLTPYPSFEGNELGNCQTGLTTVYRVKADQCDRLW 404
+P+W+ GIP TL +P + + SPKL PYP++E + +GNC GLT+V+R++ D+CDRLW
Sbjct: 203 LPKWKDGIPVTLTTVPKHSKTK-SPKLRPYPNWEWHTVGNCD-GLTSVFRIQVDECDRLW 260
Query: 405 VLDVGTYGYDNVTNV-CPYTLNVFDLNTDQIIRKYVLRPER 524
+LD G + CP + +FDL TD +IRKY++ E+
Sbjct: 261 ILDSGKVDIAKGGKLACPPAIFIFDLTTDTLIRKYIIPKEQ 301
Score = 47.2 bits (107), Expect = 1e-07
Identities = 16/49 (32%), Positives = 33/49 (67%)
Frame = +2
Query: 77 LQEIFSWNAVDWNYPDQFSKQQALRTGALIPENALPVGIERWRNKLFVS 223
++ +++W+ +D+ Y ++ A+ G I EN LP+G+E WR+K+F++
Sbjct: 154 MELVYAWSTIDYTYDSIEARDSAIFDGDFITENNLPLGLEVWRDKVFIT 202
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 80.2 bits (189), Expect = 1e-17
Identities = 35/95 (36%), Positives = 59/95 (62%)
Frame = +3
Query: 222 AVPRWRSGIPATLNYIPLDAPYEPSPKLTPYPSFEGNELGNCQTGLTTVYRVKADQCDRL 401
A+PR + G+P TL Y+ + + +P + PYP++ N++ C GLT+VYR++ D+C RL
Sbjct: 76 AIPRIQDGVPLTLGYVTREVSIDGNPLIAPYPNWSYNDVKYCD-GLTSVYRMQVDKCGRL 134
Query: 402 WVLDVGTYGYDNVTNVCPYTLNVFDLNTDQIIRKY 506
W+LD G G +C ++VF L+ +++I Y
Sbjct: 135 WILDTGILG---EKQICRPKIHVFSLHDNKLITMY 166
Score = 45.2 bits (102), Expect = 5e-07
Identities = 17/56 (30%), Positives = 39/56 (69%)
Frame = +2
Query: 29 SLVFCGLVSLASATIKLQEIFSWNAVDWNYPDQFSKQQALRTGALIPENALPVGIE 196
+++F +S + A KL+ I+SW A+++ +P+ ++K A+++G+ IP +LP+ ++
Sbjct: 8 AILFLLAISDSQAQEKLKNIYSWKALEFAFPNGYAKLAAIKSGSYIPGASLPIDVD 63
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 77.4 bits (182), Expect = 1e-16
Identities = 38/88 (43%), Positives = 57/88 (64%)
Frame = +3
Query: 240 SGIPATLNYIPLDAPYEPSPKLTPYPSFEGNELGNCQTGLTTVYRVKADQCDRLWVLDVG 419
+G+P++LN I + P L PYP + + NC +G+T+ Y+++ D CDRLWVLD G
Sbjct: 82 NGVPSSLNVIT-NKTGNGGPLLAPYPDWTWAKNENC-SGITSAYKIEIDMCDRLWVLDSG 139
Query: 420 TYGYDNVTNVCPYTLNVFDLNTDQIIRK 503
+NV +VCP L VFDLNT Q++++
Sbjct: 140 L--INNVRSVCPPQLLVFDLNTSQLLKQ 165
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 76.2 bits (179), Expect = 2e-16
Identities = 37/98 (37%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Frame = +3
Query: 225 VPRWRSGIPATLNYIPLDAPYEPSPKLTPYPSFEGNELGNCQTGLTTVYRVKADQCDRLW 404
+PRW++G+P+ LN+ L SPKL PYP++E N++ + + + RV+ D CDRLW
Sbjct: 67 IPRWKNGVPSNLNFF-LKNDESESPKLNPYPNWEMNDINKIDS-IINIIRVRVDACDRLW 124
Query: 405 VLDVGTYG-YDNVTNVCPYTLNVFDLNTDQIIRKYVLR 515
+D G N T + + + DL TD+I+R Y L+
Sbjct: 125 GVDTGVDDILGNNTVIHQPRIIIIDLKTDKILRIYPLK 162
Score = 48.0 bits (109), Expect = 7e-08
Identities = 20/63 (31%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +2
Query: 38 FCGLVSLASAT-IKLQEIFSWNAVDWNYPDQFSKQQALRTGALIPENALPVGIERWRNKL 214
F +V LA A +++ I+SWN +++N+P+ + + G I EN +P G++ W +K+
Sbjct: 4 FLWIVFLALANGEEIKTIYSWNVIEYNFPNDNIRNTLISNGDYIEENNMPNGMQIWNDKV 63
Query: 215 FVS 223
F++
Sbjct: 64 FIT 66
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 66.5 bits (155), Expect = 2e-13
Identities = 35/87 (40%), Positives = 54/87 (62%)
Frame = +3
Query: 243 GIPATLNYIPLDAPYEPSPKLTPYPSFEGNELGNCQTGLTTVYRVKADQCDRLWVLDVGT 422
G+P++LN I + P L PYP++ + NC +G+T+VYR+ D+ DRLWVLD G
Sbjct: 86 GVPSSLNVIS-NKIGNGGPLLEPYPNWSWAKNQNC-SGITSVYRIAIDEWDRLWVLDNGI 143
Query: 423 YGYDNVTNVCPYTLNVFDLNTDQIIRK 503
G T+VCP + VFDL +++++
Sbjct: 144 SG---ETSVCPSQIVVFDLKNSKLLKQ 167
Score = 38.7 bits (86), Expect = 4e-05
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +2
Query: 89 FSWNAVDWNYPDQFSKQQALRTGALIPENALPVGIERWRNKLFVS 223
+ W D+N+ +Q A+++G +N +P+ ++RW K FV+
Sbjct: 36 YQWKYFDYNFGSDEKRQAAIQSGEYNYKNNVPIDVDRWNGKTFVT 80
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 60.1 bits (139), Expect = 2e-11
Identities = 33/96 (34%), Positives = 55/96 (57%)
Frame = +3
Query: 225 VPRWRSGIPATLNYIPLDAPYEPSPKLTPYPSFEGNELGNCQTGLTTVYRVKADQCDRLW 404
VPR++ G+P++LN I + L PYP + +C +G+ + Y++ D+ DRLW
Sbjct: 84 VPRYK-GVPSSLNVIS-EKIGNGGRLLQPYPDWSWANYKDC-SGIVSAYKIAIDKFDRLW 140
Query: 405 VLDVGTYGYDNVTNVCPYTLNVFDLNTDQIIRKYVL 512
+LD G +N +C L+VFDLNT +++ V+
Sbjct: 141 ILDSGI--INNTQPMCSPKLHVFDLNTSHQLKQVVM 174
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 58.4 bits (135), Expect = 5e-11
Identities = 30/88 (34%), Positives = 50/88 (56%)
Frame = +3
Query: 240 SGIPATLNYIPLDAPYEPSPKLTPYPSFEGNELGNCQTGLTTVYRVKADQCDRLWVLDVG 419
+G+P++LN I + P L PYP + + +C +G+ + ++ D+CDRLWVLD G
Sbjct: 84 NGVPSSLNVISKKVG-DGGPLLQPYPDWSFAKYDDC-SGIVSASKLAIDKCDRLWVLDSG 141
Query: 420 TYGYDNVTNVCPYTLNVFDLNTDQIIRK 503
+N +C L FDL T Q++++
Sbjct: 142 L--VNNTQPMCSPKLLTFDLTTSQLLKQ 167
Score = 32.3 bits (70), Expect = 0.004
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 86 IFSWNAVDWNYPDQFSKQQALRTGALIPENALPVGIERWRNKLFVS 223
+ W D+++ +Q A+ +G +N P I++W +K+FV+
Sbjct: 34 LHEWKFFDYDFGSDERRQDAILSGEYDYKNNYPSDIDQWHDKIFVT 79
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 58.4 bits (135), Expect = 5e-11
Identities = 30/88 (34%), Positives = 50/88 (56%)
Frame = +3
Query: 240 SGIPATLNYIPLDAPYEPSPKLTPYPSFEGNELGNCQTGLTTVYRVKADQCDRLWVLDVG 419
+G+P++LN I + P L PYP + + +C +G+ + ++ D+CDRLWVLD G
Sbjct: 84 NGVPSSLNVISKKVG-DGGPLLQPYPDWSFAKYDDC-SGIVSASKLAIDKCDRLWVLDSG 141
Query: 420 TYGYDNVTNVCPYTLNVFDLNTDQIIRK 503
+N +C L FDL T Q++++
Sbjct: 142 L--VNNTQPMCSPKLLTFDLTTSQLLKQ 167
Score = 32.3 bits (70), Expect = 0.004
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 86 IFSWNAVDWNYPDQFSKQQALRTGALIPENALPVGIERWRNKLFVS 223
+ W D+++ +Q A+ +G +N P I++W +K+FV+
Sbjct: 34 LHEWKFFDYDFGSDERRQDAILSGEYDYKNNYPSDIDQWHDKIFVT 79
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 58.4 bits (135), Expect = 5e-11
Identities = 30/88 (34%), Positives = 50/88 (56%)
Frame = +3
Query: 240 SGIPATLNYIPLDAPYEPSPKLTPYPSFEGNELGNCQTGLTTVYRVKADQCDRLWVLDVG 419
+G+P++LN I + P L PYP + + +C +G+ + ++ D+CDRLWVLD G
Sbjct: 84 NGVPSSLNVISKKVG-DGGPLLQPYPDWSFAKYDDC-SGIVSASKLAIDKCDRLWVLDSG 141
Query: 420 TYGYDNVTNVCPYTLNVFDLNTDQIIRK 503
+N +C L FDL T Q++++
Sbjct: 142 L--VNNTQPMCSPKLLTFDLTTSQLLKQ 167
Score = 32.3 bits (70), Expect = 0.004
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 86 IFSWNAVDWNYPDQFSKQQALRTGALIPENALPVGIERWRNKLFVS 223
+ W D+++ +Q A+ +G +N P I++W +K+FV+
Sbjct: 34 LHEWKFFDYDFGSDERRQDAILSGEYDYKNNYPSDIDQWHDKIFVT 79
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 55.2 bits (127), Expect = 5e-10
Identities = 31/94 (32%), Positives = 54/94 (57%)
Frame = +3
Query: 222 AVPRWRSGIPATLNYIPLDAPYEPSPKLTPYPSFEGNELGNCQTGLTTVYRVKADQCDRL 401
AV R+ +G+P++LN + D L PYP + + +C +G+ + +++ D+ +RL
Sbjct: 84 AVIRY-NGVPSSLNVVS-DKTGNGGRLLQPYPDWSFAKYEDC-SGIVSAHKIAIDEYERL 140
Query: 402 WVLDVGTYGYDNVTNVCPYTLNVFDLNTDQIIRK 503
WVLD G +N +C L FDLNT Q++++
Sbjct: 141 WVLDSGL--VNNTQPMCSPKLFAFDLNTSQLLKQ 172
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 54.8 bits (126), Expect = 6e-10
Identities = 32/94 (34%), Positives = 53/94 (56%)
Frame = +3
Query: 222 AVPRWRSGIPATLNYIPLDAPYEPSPKLTPYPSFEGNELGNCQTGLTTVYRVKADQCDRL 401
AV R+ G+P++LN I + L PYP + +C +G+ + Y++ D+ DRL
Sbjct: 83 AVIRY-DGVPSSLNVIS-EKIGNGGCLLQPYPDWSWANYKDC-SGIVSAYKIAIDKFDRL 139
Query: 402 WVLDVGTYGYDNVTNVCPYTLNVFDLNTDQIIRK 503
WVLD G +N+ +C L FDLNT +++++
Sbjct: 140 WVLDSGL--INNIQLMCSPKLLAFDLNTSKLLKQ 171
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 54.0 bits (124), Expect = 1e-09
Identities = 27/88 (30%), Positives = 51/88 (57%)
Frame = +3
Query: 240 SGIPATLNYIPLDAPYEPSPKLTPYPSFEGNELGNCQTGLTTVYRVKADQCDRLWVLDVG 419
+G+P++LN + + + P L PYP + + +C +G+ + +++ D+ DRLWVLD G
Sbjct: 90 NGVPSSLNVVT-NKKGKGGPLLRPYPDWSFAKYEDC-SGIVSAFKIAVDKFDRLWVLDSG 147
Query: 420 TYGYDNVTNVCPYTLNVFDLNTDQIIRK 503
+N +C L FDL T +++++
Sbjct: 148 L--VNNNQPMCSPKLLTFDLKTSKLVKQ 173
Score = 35.5 bits (78), Expect = 4e-04
Identities = 12/49 (24%), Positives = 27/49 (55%)
Frame = +2
Query: 77 LQEIFSWNAVDWNYPDQFSKQQALRTGALIPENALPVGIERWRNKLFVS 223
++ I+ W +D+++ + A+++G P ++RWR+K FV+
Sbjct: 37 MKVIYEWKHIDFDFGSDERRDAAIKSGEFDHTKNYPFDVDRWRDKTFVT 85
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 50.4 bits (115), Expect = 1e-08
Identities = 29/87 (33%), Positives = 45/87 (51%)
Frame = +3
Query: 243 GIPATLNYIPLDAPYEPSPKLTPYPSFEGNELGNCQTGLTTVYRVKADQCDRLWVLDVGT 422
G+P+TLN I + L PYP + E +C + + +++ D+ DRLWVLD G
Sbjct: 86 GVPSTLNVIS-GKTGKGGRLLKPYPDWSFAEFKDCSK-IVSAFKIAIDKFDRLWVLDSGL 143
Query: 423 YGYDNVTNVCPYTLNVFDLNTDQIIRK 503
+ VC L+VFDL T +++
Sbjct: 144 --VNRTVPVCAPKLHVFDLKTSNHLKQ 168
>U15954-1|AAA67442.1| 53|Apis mellifera abaecin precursor protein.
Length = 53
Score = 25.0 bits (52), Expect = 0.56
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 246 IPATLNYIPLDAPYEPSPKLTPYPSFEG 329
I A Y+PL P P P P+P+F G
Sbjct: 14 ICAAFAYVPL--PNVPQPGRRPFPTFPG 39
>AF442147-1|AAL35348.1| 33|Apis mellifera abaecin precursor
protein.
Length = 33
Score = 24.6 bits (51), Expect = 0.74
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 252 ATLNYIPLDAPYEPSPKLTPYPSFEG 329
A Y+PL P P P P+P+F G
Sbjct: 2 AAFAYVPL--PNVPQPGRRPFPTFPG 25
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 23.0 bits (47), Expect = 2.3
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 125 QFSKQQALRTGALIPENALPV--GIERWRNKLFVSRS*VALRYPSYFEL 265
Q SK +A+ LI + LPV G+ RW + + ++L +EL
Sbjct: 34 QDSKAKAIVVNTLISNDILPVCNGLWRWIRLTYGQTNHISLTLDLEYEL 82
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 23.0 bits (47), Expect = 2.3
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 125 QFSKQQALRTGALIPENALPV--GIERWRNKLFVSRS*VALRYPSYFEL 265
Q SK +A+ LI + LPV G+ RW + + ++L +EL
Sbjct: 72 QDSKAKAIVVNTLISNDILPVCNGLWRWIRLTYGQTNHISLTLDLEYEL 120
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 218 RTICSSTFRYQRAVRSLVSEHQS 150
R+I SS RY R++ +HQ+
Sbjct: 379 RSIYSSLLRYPRSIFRQTDDHQN 401
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.8 bits (44), Expect = 5.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 384 DQCDRLWVLDVGTYGYDNVTNV 449
DQ +V VG YGYD V +V
Sbjct: 67 DQMGVHFVGFVGQYGYDRVLSV 88
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +1
Query: 511 YDQKDIGSTTFHWQHRSRYP 570
Y ++DIG HW YP
Sbjct: 198 YWREDIGINLHHWHWHLVYP 217
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.0 bits (42), Expect = 9.1
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 184 RWYRKVEEQIVRQPFLGGAQVSQL 255
RWY+ +E RQP +V Q+
Sbjct: 245 RWYKFIEGSSRRQPVQLNERVRQV 268
>AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced protein
75 protein.
Length = 87
Score = 21.0 bits (42), Expect = 9.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 180 CPLVSKGGGTNCSS 221
C L + GTNCSS
Sbjct: 7 CDLATPRTGTNCSS 20
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,432
Number of Sequences: 438
Number of extensions: 4209
Number of successful extensions: 45
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -