Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2368
(617 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 25 0.38
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 24 1.2
AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein p... 24 1.2
AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein p... 24 1.2
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 23 1.6
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 23 2.7
AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment h... 22 3.6
AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle pr... 22 3.6
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 22 4.7
AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory recept... 21 6.3
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 21 8.3
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 25.4 bits (53), Expect = 0.38
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 3 NVQVDSVCFISCRGC*-AWSLLDASRDVPNNCGFSG 107
N++++ V C C A SL++++R+VP C F+G
Sbjct: 718 NMKLEKVPGECCAICVNATSLVESNRNVPQKCIFNG 753
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +2
Query: 407 LAPTSLPTPTSQVALLEPLPTRHPSC 484
+ P PT +S AL P P SC
Sbjct: 214 IPPAEFPTTSSSSALESPNPASRSSC 239
>AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +2
Query: 407 LAPTSLPTPTSQVALLEPLPTRHPSC 484
+ P PT +S AL P P SC
Sbjct: 3 IPPAEFPTTSSSSALESPNPASRSSC 28
>AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +2
Query: 407 LAPTSLPTPTSQVALLEPLPTRHPSC 484
+ P PT +S AL P P SC
Sbjct: 3 IPPAEFPTTSSSSALESPNPASRSSC 28
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 23.4 bits (48), Expect = 1.6
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +2
Query: 407 LAPTSLPTPTSQVALLEPLPTRHPSC 484
+ P PT +S AL P P SC
Sbjct: 214 IPPAEFPTTSSSSALESPDPASRSSC 239
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 22.6 bits (46), Expect = 2.7
Identities = 10/33 (30%), Positives = 14/33 (42%)
Frame = +3
Query: 468 HDTLRADRADRIDCITSRRSSSDQKRRLPPCWR 566
H L D ++ T D + RLPP W+
Sbjct: 193 HTPLTDDHDEKYGVPTLEELGFDTEGRLPPVWQ 225
>AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment
homeodomain protein protein.
Length = 232
Score = 22.2 bits (45), Expect = 3.6
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 328 LISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASGP 450
LI QP+ S + PQWP ++ + +P T +GP
Sbjct: 64 LIPQPLHPSVP--RLGHPQWPFAWGSLXRSSSPQTSAPTGP 102
>AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle
protein.
Length = 361
Score = 22.2 bits (45), Expect = 3.6
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -2
Query: 106 PEKPQLLGTSREASRRLQAQQPRQLIKHT 20
PEK G + S QA QP I+H+
Sbjct: 117 PEKGGGAGAAASGSAAAQAGQPDNAIEHS 145
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 21.8 bits (44), Expect = 4.7
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = +2
Query: 425 PTPTSQVALLEPLPTRHPSCRP--CRSHRLHHFP 520
PTPTS + L P P S P +H + H P
Sbjct: 313 PTPTSVMTELYPSPVPGHSTSPNLPLTHNIAHNP 346
>AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory receptor
candidate 43 protein.
Length = 353
Score = 21.4 bits (43), Expect = 6.3
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 264 SNHLPR*NSSPGFDLLRFFDSFNLATYCVF 353
S HLP+ +++ FD+ R L T C F
Sbjct: 314 SQHLPKFSAANFFDIERSTILSVLGTACTF 343
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 21.0 bits (42), Expect = 8.3
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 321 DSFNLATYCVFCSFYQEALST 383
DSF L + +CS Q LST
Sbjct: 225 DSFTLEQHRSWCSSSQPVLST 245
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,942
Number of Sequences: 336
Number of extensions: 2749
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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