Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2367
(670 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 219 1e-57
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 219 1e-57
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 219 1e-57
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 219 1e-57
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 219 1e-57
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 219 1e-57
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 219 1e-57
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 219 1e-57
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 219 1e-57
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 213 7e-56
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 208 4e-54
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 103 2e-22
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 95 3e-20
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 79 4e-15
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 70 2e-12
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 59 3e-09
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 54 1e-07
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 54 1e-07
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 33 0.14
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.56
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.56
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.56
Z74043-10|CAA98542.2| 653|Caenorhabditis elegans Hypothetical p... 28 6.9
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 6.9
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 6.9
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 6.9
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 6.9
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 219 bits (536), Expect = 1e-57
Identities = 105/131 (80%), Positives = 113/131 (86%)
Frame = -1
Query: 664 KVITIETKRFPLPRGFSSNPSFLGMXACGIHETTYNSIMKCDVNIRKDLYAKHRIVRWTT 485
+VIT+ +RF P PSFLGM + GIHET+YNSIMKCD++IRKDLYA + TT
Sbjct: 247 QVITVGNERFRCPEAMFQ-PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 305
Query: 484 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 305
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 304 SGPSIVHRKCF 272
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 219 bits (536), Expect = 1e-57
Identities = 105/131 (80%), Positives = 113/131 (86%)
Frame = -1
Query: 664 KVITIETKRFPLPRGFSSNPSFLGMXACGIHETTYNSIMKCDVNIRKDLYAKHRIVRWTT 485
+VIT+ +RF P PSFLGM + GIHET+YNSIMKCD++IRKDLYA + TT
Sbjct: 247 QVITVGNERFRCPEALFQ-PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 305
Query: 484 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 305
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 304 SGPSIVHRKCF 272
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 219 bits (536), Expect = 1e-57
Identities = 105/131 (80%), Positives = 113/131 (86%)
Frame = -1
Query: 664 KVITIETKRFPLPRGFSSNPSFLGMXACGIHETTYNSIMKCDVNIRKDLYAKHRIVRWTT 485
+VIT+ +RF P PSFLGM + GIHET+YNSIMKCD++IRKDLYA + TT
Sbjct: 247 QVITVGNERFRCPEAMFQ-PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 305
Query: 484 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 305
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 304 SGPSIVHRKCF 272
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 219 bits (536), Expect = 1e-57
Identities = 105/131 (80%), Positives = 113/131 (86%)
Frame = -1
Query: 664 KVITIETKRFPLPRGFSSNPSFLGMXACGIHETTYNSIMKCDVNIRKDLYAKHRIVRWTT 485
+VIT+ +RF P PSFLGM + GIHET+YNSIMKCD++IRKDLYA + TT
Sbjct: 247 QVITVGNERFRCPEALFQ-PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 305
Query: 484 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 305
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 304 SGPSIVHRKCF 272
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 219 bits (536), Expect = 1e-57
Identities = 105/131 (80%), Positives = 113/131 (86%)
Frame = -1
Query: 664 KVITIETKRFPLPRGFSSNPSFLGMXACGIHETTYNSIMKCDVNIRKDLYAKHRIVRWTT 485
+VIT+ +RF P PSFLGM + GIHET+YNSIMKCD++IRKDLYA + TT
Sbjct: 247 QVITVGNERFRCPEALFQ-PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 305
Query: 484 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 305
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 304 SGPSIVHRKCF 272
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 219 bits (536), Expect = 1e-57
Identities = 105/131 (80%), Positives = 113/131 (86%)
Frame = -1
Query: 664 KVITIETKRFPLPRGFSSNPSFLGMXACGIHETTYNSIMKCDVNIRKDLYAKHRIVRWTT 485
+VIT+ +RF P PSFLGM + GIHET+YNSIMKCD++IRKDLYA + TT
Sbjct: 247 QVITVGNERFRCPEAMFQ-PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 305
Query: 484 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 305
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 304 SGPSIVHRKCF 272
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 219 bits (536), Expect = 1e-57
Identities = 105/131 (80%), Positives = 113/131 (86%)
Frame = -1
Query: 664 KVITIETKRFPLPRGFSSNPSFLGMXACGIHETTYNSIMKCDVNIRKDLYAKHRIVRWTT 485
+VIT+ +RF P PSFLGM + GIHET+YNSIMKCD++IRKDLYA + TT
Sbjct: 203 QVITVGNERFRCPEALFQ-PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 261
Query: 484 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 305
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 262 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 321
Query: 304 SGPSIVHRKCF 272
SGPSIVHRKCF
Sbjct: 322 SGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 219 bits (536), Expect = 1e-57
Identities = 105/131 (80%), Positives = 113/131 (86%)
Frame = -1
Query: 664 KVITIETKRFPLPRGFSSNPSFLGMXACGIHETTYNSIMKCDVNIRKDLYAKHRIVRWTT 485
+VIT+ +RF P PSFLGM + GIHET+YNSIMKCD++IRKDLYA + TT
Sbjct: 233 QVITVGNERFRCPEALFQ-PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 291
Query: 484 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 305
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 292 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 351
Query: 304 SGPSIVHRKCF 272
SGPSIVHRKCF
Sbjct: 352 SGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 219 bits (536), Expect = 1e-57
Identities = 105/131 (80%), Positives = 113/131 (86%)
Frame = -1
Query: 664 KVITIETKRFPLPRGFSSNPSFLGMXACGIHETTYNSIMKCDVNIRKDLYAKHRIVRWTT 485
+VIT+ +RF P PSFLGM + GIHET+YNSIMKCD++IRKDLYA + TT
Sbjct: 247 QVITVGNERFRCPEALFQ-PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 305
Query: 484 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 305
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 304 SGPSIVHRKCF 272
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 213 bits (521), Expect = 7e-56
Identities = 104/131 (79%), Positives = 112/131 (85%)
Frame = -1
Query: 664 KVITIETKRFPLPRGFSSNPSFLGMXACGIHETTYNSIMKCDVNIRKDLYAKHRIVRWTT 485
+VIT+ +RF P PSFLGM + GIHET+YNSIMKCD++IRKDLYA + TT
Sbjct: 247 QVITVGNERFRCPEAMFQ-PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 305
Query: 484 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 305
MYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 364
Query: 304 SGPSIVHRKCF 272
SGPSIVHRKCF
Sbjct: 365 SGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 208 bits (507), Expect = 4e-54
Identities = 101/131 (77%), Positives = 109/131 (83%)
Frame = -1
Query: 664 KVITIETKRFPLPRGFSSNPSFLGMXACGIHETTYNSIMKCDVNIRKDLYAKHRIVRWTT 485
+VITI +RF P P+F+GM GIHETTY SIMKCDV+IRKDLYA + T+
Sbjct: 246 QVITIGNERFRCPEVLFQ-PAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTS 304
Query: 484 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 305
M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 305 MFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 364
Query: 304 SGPSIVHRKCF 272
SGPSIVHRKCF
Sbjct: 365 SGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 103 bits (246), Expect = 2e-22
Identities = 47/112 (41%), Positives = 71/112 (63%)
Frame = -1
Query: 607 PSFLGMXACGIHETTYNSIMKCDVNIRKDLYAKHRIVRWTTMYPGIADRMQKEITALAPS 428
P +G G+ SIMKCDV++R+ LY+ + TT++ G DR+ E+ +AP+
Sbjct: 263 PDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPA 322
Query: 427 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 272
KI+I A ER WIGGSI+ASL TF++MW+ K+EY++ G S +H++ F
Sbjct: 323 DGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 95.5 bits (227), Expect = 3e-20
Identities = 43/92 (46%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Frame = -1
Query: 541 DVNIRKDLYAKHRIVRWTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIG 371
D++IR L++ + ++ G +R+ + P T+K+++ A P ERKY WIG
Sbjct: 344 DIDIRPTLFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIG 403
Query: 370 GSILASLSTFQQMWISKQEYDESGPSIVHRKC 275
GSIL SL TFQQMW+SK EYDESG SIV +KC
Sbjct: 404 GSILGSLGTFQQMWVSKAEYDESGKSIVEKKC 435
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 78.6 bits (185), Expect = 4e-15
Identities = 48/136 (35%), Positives = 73/136 (53%), Gaps = 14/136 (10%)
Frame = -1
Query: 664 KVITIETKRFPLPRGFSSNPSFLGMXACGIHETTYNSIMKCDVNIRKDLYAKHRIVRW-T 488
+VI + +RF P P + + G+ E + I D++ R D Y KH ++ T
Sbjct: 250 RVIRLGGERFEAPE-ILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFY-KHIVLSGGT 307
Query: 487 TMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILASL--S 347
TMYPG+ R++KE+ L A KI+I APP RK+ V++GG++LA+L
Sbjct: 308 TMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKD 367
Query: 346 TFQQMWISKQEYDESG 299
Q W+SK+EY+E G
Sbjct: 368 RDQDFWVSKKEYEEGG 383
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/113 (28%), Positives = 64/113 (56%)
Frame = -1
Query: 652 IETKRFPLPRGFSSNPSFLGMXACGIHETTYNSIMKCDVNIRKDLYAKHRIVRWTTMYPG 473
I+ RF G P G+ G+H+ + +I++C ++ R+ LY + ++ PG
Sbjct: 428 IDNSRFLCTEGLFK-PKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPG 486
Query: 472 IADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 314
IA+++++E++ + P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 487 IAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 58.8 bits (136), Expect = 3e-09
Identities = 34/112 (30%), Positives = 60/112 (53%), Gaps = 16/112 (14%)
Frame = -1
Query: 577 IHETTYNSIMKCDVNIRKDLYAKHRIVRWTTMYPGIADRMQKEITALA------------ 434
I +T I +C +++R+ LY + +TM+ A ++Q+++ L+
Sbjct: 303 ISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSG 362
Query: 433 ----PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 290
P + +++I+ ++Y+VW GGS+LAS S F Q+ +K EY E GPSI
Sbjct: 363 GRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/138 (23%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
Frame = -1
Query: 670 RVKVITIETKRFPLPRGFSSNPSFLGMXACGIHETTYNSIMKCDVNIRKDLYAKHRIVRW 491
++ I + +RF +P NPS + + CG+ E SI +C +R L ++
Sbjct: 259 QIPSIHLGVERFAIPE-ILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGG 317
Query: 490 TTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISK 320
++ +PG +R+++E+ ++ P+ + + + P+ W G L L+ + WI++
Sbjct: 318 SSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINR 373
Query: 319 QEYDESGPSIVHRKCF*T 266
+++DE G S+ F T
Sbjct: 374 KDWDERGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/138 (23%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
Frame = -1
Query: 670 RVKVITIETKRFPLPRGFSSNPSFLGMXACGIHETTYNSIMKCDVNIRKDLYAKHRIVRW 491
++ I + +RF +P NPS + + CG+ E SI +C +R L ++
Sbjct: 259 QIPSIHLGVERFAIPE-ILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGG 317
Query: 490 TTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISK 320
++ +PG +R+++E+ ++ P+ + + + P+ W G L L+ + WI++
Sbjct: 318 SSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINR 373
Query: 319 QEYDESGPSIVHRKCF*T 266
+++DE G S+ F T
Sbjct: 374 KDWDERGDSLEFSNFFQT 391
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 33.5 bits (73), Expect = 0.14
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Frame = -1
Query: 553 IMKCDVNIRKDLYAKHRIVRWTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 389
+ KC +++RK L+ + + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 388 ----YSVWIGGSILASL-STFQQMWISKQEY 311
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.56
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 377 PYGVLPLWRSNDLNLHCRWGESCD 448
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.56
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 377 PYGVLPLWRSNDLNLHCRWGESCD 448
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.56
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 377 PYGVLPLWRSNDLNLHCRWGESCD 448
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z74043-10|CAA98542.2| 653|Caenorhabditis elegans Hypothetical
protein T19B10.3 protein.
Length = 653
Score = 27.9 bits (59), Expect = 6.9
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -3
Query: 524 GLVRQTPYCPVDHHVPWNRRPYAKGNH 444
G VR + + +++PWN +GNH
Sbjct: 80 GKVRALGFNAIQYYIPWNMHELEEGNH 106
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 213 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 305
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 316 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 215
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 213 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 305
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -1
Query: 397 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 236
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,758,199
Number of Sequences: 27780
Number of extensions: 344353
Number of successful extensions: 1037
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1032
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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