Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2366
         (613 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021487-8|CAB76733.1|  320|Caenorhabditis elegans Hypothetical ...    30   1.5  
Z81568-14|CAB04591.2|  608|Caenorhabditis elegans Hypothetical p...    29   2.0  
Z81030-13|CAB02705.2|  358|Caenorhabditis elegans Hypothetical p...    29   2.0  
AL590342-2|CAC35859.3|  685|Caenorhabditis elegans Hypothetical ...    29   2.0  
AL032622-4|CAA21499.1|  738|Caenorhabditis elegans Y66A7A.5 prot...    29   2.0  
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch...    29   2.6  
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch...    29   2.6  
AL132860-4|CAB60496.1|  762|Caenorhabditis elegans Hypothetical ...    28   6.0  
AC024881-8|AAK71411.2|  318|Caenorhabditis elegans Serpentine re...    28   6.0  
Z70781-1|CAA94835.1|  358|Caenorhabditis elegans Hypothetical pr...    27   8.0  
AL034393-17|CAA22315.1|  503|Caenorhabditis elegans Hypothetical...    27   8.0  
AC024796-11|AAK29890.2|  828|Caenorhabditis elegans Hypothetical...    27   8.0  

>AL021487-8|CAB76733.1|  320|Caenorhabditis elegans Hypothetical
           protein Y45F10B.14 protein.
          Length = 320

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3

Query: 360 TLMWGCIGLVTVSFILVTSYMFYDALYFT 446
           TL W  IG++ V  IL  +++ Y ALY T
Sbjct: 5   TLYWSVIGVIDVLAILFNAFLIYLALYRT 33


>Z81568-14|CAB04591.2|  608|Caenorhabditis elegans Hypothetical
           protein K08E3.3a protein.
          Length = 608

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 15/74 (20%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
 Frame = +1

Query: 58  VTSDRLLKAYINWFLDKGRCTPEASDFKKALPDTIATNCGKCT-EKQKANVRKVIKVIQQ 234
           ++S ++L++  +  + K   TP++   + A+  T      K + E       +++ V++ 
Sbjct: 520 ISSPKILRSSFSGAIRKSLSTPDSVKVETAVTVTALFEFAKSSAETMSIEQGEILLVLEH 579

Query: 235 KHSTEWEKLVKKHD 276
            H   W +  KKH+
Sbjct: 580 DHGDGWTRTKKKHN 593


>Z81030-13|CAB02705.2|  358|Caenorhabditis elegans Hypothetical
           protein C01G10.3 protein.
          Length = 358

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = +2

Query: 281 RENTVLISTNSF*EAKYLLISYFGLGHTYVGMHRLSN--CFIYIGHFLHVL 427
           REN        F ++ + + S FGL    +  HR     CF ++  F+HVL
Sbjct: 226 RENVAQFFQTVFQDSLFFISSTFGLKLNTIIAHRFWTFFCFTFVWQFIHVL 276


>AL590342-2|CAC35859.3|  685|Caenorhabditis elegans Hypothetical
           protein Y66A7A.5 protein.
          Length = 685

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
 Frame = +1

Query: 46  VEPIVTSDRLLKAYINWFLDKGRCTPEASDF--KKALPDTIATNCGKCTE 189
           ++PI T+ R +  Y N+F D G    + SD   KK++  T + +C +C+E
Sbjct: 77  MKPIKTTRREMAIYENYFRDHGYFETQKSDVNRKKSMKLT-SISCSQCSE 125


>AL032622-4|CAA21499.1|  738|Caenorhabditis elegans Y66A7A.5
           protein.
          Length = 738

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
 Frame = +1

Query: 46  VEPIVTSDRLLKAYINWFLDKGRCTPEASDF--KKALPDTIATNCGKCTE 189
           ++PI T+ R +  Y N+F D G    + SD   KK++  T + +C +C+E
Sbjct: 77  MKPIKTTRREMAIYENYFRDHGYFETQKSDVNRKKSMKLT-SISCSQCSE 125


>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
            protein 1 protein.
          Length = 4568

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +2

Query: 368  VGMHRLSNCFI-YIGHFLHVLRCSLFHNWF 454
            VG   LS+ F+ Y G++  +LR  +FH WF
Sbjct: 3447 VGDALLSSAFLAYAGYYDQMLRDEIFHKWF 3476


>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
            protein.
          Length = 4568

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +2

Query: 368  VGMHRLSNCFI-YIGHFLHVLRCSLFHNWF 454
            VG   LS+ F+ Y G++  +LR  +FH WF
Sbjct: 3447 VGDALLSSAFLAYAGYYDQMLRDEIFHKWF 3476


>AL132860-4|CAB60496.1|  762|Caenorhabditis elegans Hypothetical
           protein Y56A3A.5 protein.
          Length = 762

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +1

Query: 22  LSKYENFDVEPIVTSDRLLKAYINWFLDKGRCTPEASDFKKALPDTI 162
           +S Y +       +SD   K  I WF+D G C+   S+ ++A+ +TI
Sbjct: 449 MSPYSSLSPLLDTSSDDKRKPVIGWFVDDGFCSVSPSN-QRAVEETI 494


>AC024881-8|AAK71411.2|  318|Caenorhabditis elegans Serpentine
           receptor, class t protein53 protein.
          Length = 318

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 266 FTSFSHSVECFCCITLITFLTLAFCFSV 183
           +T+  H++  F  + L +FL + FCF V
Sbjct: 192 YTNIPHTINNFSLVFLTSFLYMFFCFKV 219


>Z70781-1|CAA94835.1|  358|Caenorhabditis elegans Hypothetical
           protein F57A8.3 protein.
          Length = 358

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 13/49 (26%), Positives = 23/49 (46%)
 Frame = +2

Query: 296 LISTNSF*EAKYLLISYFGLGHTYVGMHRLSNCFIYIGHFLHVLRCSLF 442
           + ST  +    Y ++   GLG+ +   +RL +    + H L +L C  F
Sbjct: 56  IFSTIDWVVQPYAVMDINGLGYVFYSENRLFDLGYSLSHLLQILYCGCF 104


>AL034393-17|CAA22315.1|  503|Caenorhabditis elegans Hypothetical
           protein Y18D10A.23 protein.
          Length = 503

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 46  VEPIVTSDRLLKAYINWFLDKGRCTPE 126
           +E ++ S+++   Y+NWF D  + T E
Sbjct: 455 IEALIISEQVAPCYVNWFRDGFKSTRE 481


>AC024796-11|AAK29890.2|  828|Caenorhabditis elegans Hypothetical
           protein Y48G1C.8 protein.
          Length = 828

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -2

Query: 360 WPKPK*LINKYLAS*KEFVEISTVFSRRIMFLHKFFPFCGMFLLY 226
           W   K L+ +YL +  E +  S   +RR  +L    P  G+F+ +
Sbjct: 399 WAHNKKLLLRYLVNEPELLSQSNCLNRRTPYLPPLIPTTGVFVYF 443


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,657,947
Number of Sequences: 27780
Number of extensions: 274355
Number of successful extensions: 729
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)