Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2363
         (605 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    24   4.4  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   5.8  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    23   7.7  

>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -1

Query: 347 FGFKFVIIVVY*LFDI-CESAKMWENETKPLDVTY 246
           F + F I  ++  F I CE+  +++ +TKP+D+ Y
Sbjct: 519 FLWLFTIASLFGTFAILCEAPSLYD-DTKPIDIEY 552


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -1

Query: 347  FGFKFVIIVVY*LFDICESAKMWENETKPLDVTYRD 240
            FGF  VII+   LF   +  ++W +    + + YR+
Sbjct: 1037 FGFSLVIILTLVLFVFRQEMRVWFHSKFGVRLFYRN 1072


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 138 MSQINHLHFNSLHNII 91
           MS +NH HFN   NI+
Sbjct: 540 MSLVNHNHFNRRVNIL 555


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 542,436
Number of Sequences: 2352
Number of extensions: 9581
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)