BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2363
(605 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118685-1|AAM50545.1| 485|Drosophila melanogaster AT12403p pro... 29 3.7
AE014298-614|AAF45933.1| 485|Drosophila melanogaster CG15572-PA... 29 3.7
X54666-1|CAA38477.1| 728|Drosophila melanogaster BRcore-TNT1-Q1... 28 8.6
X54665-1|CAA38476.1| 514|Drosophila melanogaster BRcore-Z2 prot... 28 8.6
X54664-1|CAA38475.1| 704|Drosophila melanogaster BRcore-NS-Z3 p... 28 8.6
X54663-1|CAA38474.1| 663|Drosophila melanogaster BRcore-Q1-Z1 p... 28 8.6
U51585-1|AAB09760.1| 877|Drosophila melanogaster Broad-Complex ... 28 8.6
AY069756-1|AAL39901.1| 880|Drosophila melanogaster LP12157p pro... 28 8.6
AL009146-4|CAA15629.1| 710|Drosophila melanogaster EG:17A9.1,FB... 28 8.6
AL009146-3|CAA15628.1| 702|Drosophila melanogaster EG:17A9.1,FB... 28 8.6
AL009146-2|CAA15627.1| 880|Drosophila melanogaster EG:17A9.1,FB... 28 8.6
AL009146-1|CAA15626.1| 514|Drosophila melanogaster EG:17A9.1,FB... 28 8.6
AE014298-238|AAN09054.1| 663|Drosophila melanogaster CG11491-PG... 28 8.6
AE014298-237|AAF45648.1| 724|Drosophila melanogaster CG11491-PE... 28 8.6
AE014298-236|AAN09053.1| 880|Drosophila melanogaster CG11491-PC... 28 8.6
AE014298-235|AAF45647.1| 880|Drosophila melanogaster CG11491-PB... 28 8.6
AE014298-234|AAF45650.2| 628|Drosophila melanogaster CG11491-PD... 28 8.6
AE014298-233|AAF45651.2| 702|Drosophila melanogaster CG11491-PA... 28 8.6
AE014298-232|AAN09052.1| 502|Drosophila melanogaster CG11491-PF... 28 8.6
>AY118685-1|AAM50545.1| 485|Drosophila melanogaster AT12403p
protein.
Length = 485
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = -3
Query: 258 GRNLSGSSKKSTEKILVNDHHFTEIIFHLKS-SHL--FHPS*LMSQINHLHFNSLHNIIF 88
G+ L+GS + T+ L + HH + L SHL FH ++Q++ LH + H I
Sbjct: 25 GQKLAGSLGE-TQHHLQHQHHLNHQLNQLNQLSHLNQFHQLNQLNQLSQLHQHIQHKISS 83
Query: 87 HKNMN 73
N+N
Sbjct: 84 GMNLN 88
>AE014298-614|AAF45933.1| 485|Drosophila melanogaster CG15572-PA
protein.
Length = 485
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = -3
Query: 258 GRNLSGSSKKSTEKILVNDHHFTEIIFHLKS-SHL--FHPS*LMSQINHLHFNSLHNIIF 88
G+ L+GS + T+ L + HH + L SHL FH ++Q++ LH + H I
Sbjct: 25 GQKLAGSLGE-TQHHLQHQHHLNHQLNQLNQLSHLNQFHQLNQLNQLSQLHQHIQHKISS 83
Query: 87 HKNMN 73
N+N
Sbjct: 84 GMNLN 88
>X54666-1|CAA38477.1| 728|Drosophila melanogaster BRcore-TNT1-Q1-Z1
protein.
Length = 728
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 174 LKSSHLFHPS*LMSQINHLHFNSLHNIIFHKNMNRH 67
LKS+ HP L+ +N + ++L I+H +N H
Sbjct: 61 LKSTPCKHPVILLQDVNFMDLHALVEFIYHGEVNVH 96
>X54665-1|CAA38476.1| 514|Drosophila melanogaster BRcore-Z2
protein.
Length = 514
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 174 LKSSHLFHPS*LMSQINHLHFNSLHNIIFHKNMNRH 67
LKS+ HP L+ +N + ++L I+H +N H
Sbjct: 61 LKSTPCKHPVILLQDVNFMDLHALVEFIYHGEVNVH 96
>X54664-1|CAA38475.1| 704|Drosophila melanogaster BRcore-NS-Z3
protein.
Length = 704
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 174 LKSSHLFHPS*LMSQINHLHFNSLHNIIFHKNMNRH 67
LKS+ HP L+ +N + ++L I+H +N H
Sbjct: 61 LKSTPCKHPVILLQDVNFMDLHALVEFIYHGEVNVH 96
>X54663-1|CAA38474.1| 663|Drosophila melanogaster BRcore-Q1-Z1
protein.
Length = 663
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 174 LKSSHLFHPS*LMSQINHLHFNSLHNIIFHKNMNRH 67
LKS+ HP L+ +N + ++L I+H +N H
Sbjct: 61 LKSTPCKHPVILLQDVNFMDLHALVEFIYHGEVNVH 96
>U51585-1|AAB09760.1| 877|Drosophila melanogaster Broad-Complex
protein isoform Z4 protein.
Length = 877
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 174 LKSSHLFHPS*LMSQINHLHFNSLHNIIFHKNMNRH 67
LKS+ HP L+ +N + ++L I+H +N H
Sbjct: 61 LKSTPCKHPVILLQDVNFMDLHALVEFIYHGEVNVH 96
>AY069756-1|AAL39901.1| 880|Drosophila melanogaster LP12157p
protein.
Length = 880
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 174 LKSSHLFHPS*LMSQINHLHFNSLHNIIFHKNMNRH 67
LKS+ HP L+ +N + ++L I+H +N H
Sbjct: 61 LKSTPCKHPVILLQDVNFMDLHALVEFIYHGEVNVH 96
>AL009146-4|CAA15629.1| 710|Drosophila melanogaster
EG:17A9.1,FBgn0000210;br protein.
Length = 710
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 174 LKSSHLFHPS*LMSQINHLHFNSLHNIIFHKNMNRH 67
LKS+ HP L+ +N + ++L I+H +N H
Sbjct: 61 LKSTPCKHPVILLQDVNFMDLHALVEFIYHGEVNVH 96
>AL009146-3|CAA15628.1| 702|Drosophila melanogaster
EG:17A9.1,FBgn0000210;br protein.
Length = 702
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 174 LKSSHLFHPS*LMSQINHLHFNSLHNIIFHKNMNRH 67
LKS+ HP L+ +N + ++L I+H +N H
Sbjct: 61 LKSTPCKHPVILLQDVNFMDLHALVEFIYHGEVNVH 96
>AL009146-2|CAA15627.1| 880|Drosophila melanogaster
EG:17A9.1,FBgn0000210;br protein.
Length = 880
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 174 LKSSHLFHPS*LMSQINHLHFNSLHNIIFHKNMNRH 67
LKS+ HP L+ +N + ++L I+H +N H
Sbjct: 61 LKSTPCKHPVILLQDVNFMDLHALVEFIYHGEVNVH 96
>AL009146-1|CAA15626.1| 514|Drosophila melanogaster
EG:17A9.1,FBgn0000210;br protein.
Length = 514
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 174 LKSSHLFHPS*LMSQINHLHFNSLHNIIFHKNMNRH 67
LKS+ HP L+ +N + ++L I+H +N H
Sbjct: 61 LKSTPCKHPVILLQDVNFMDLHALVEFIYHGEVNVH 96
>AE014298-238|AAN09054.1| 663|Drosophila melanogaster CG11491-PG,
isoform G protein.
Length = 663
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 174 LKSSHLFHPS*LMSQINHLHFNSLHNIIFHKNMNRH 67
LKS+ HP L+ +N + ++L I+H +N H
Sbjct: 61 LKSTPCKHPVILLQDVNFMDLHALVEFIYHGEVNVH 96
>AE014298-237|AAF45648.1| 724|Drosophila melanogaster CG11491-PE,
isoform E protein.
Length = 724
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 174 LKSSHLFHPS*LMSQINHLHFNSLHNIIFHKNMNRH 67
LKS+ HP L+ +N + ++L I+H +N H
Sbjct: 61 LKSTPCKHPVILLQDVNFMDLHALVEFIYHGEVNVH 96
>AE014298-236|AAN09053.1| 880|Drosophila melanogaster CG11491-PC,
isoform C protein.
Length = 880
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 174 LKSSHLFHPS*LMSQINHLHFNSLHNIIFHKNMNRH 67
LKS+ HP L+ +N + ++L I+H +N H
Sbjct: 61 LKSTPCKHPVILLQDVNFMDLHALVEFIYHGEVNVH 96
>AE014298-235|AAF45647.1| 880|Drosophila melanogaster CG11491-PB,
isoform B protein.
Length = 880
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 174 LKSSHLFHPS*LMSQINHLHFNSLHNIIFHKNMNRH 67
LKS+ HP L+ +N + ++L I+H +N H
Sbjct: 61 LKSTPCKHPVILLQDVNFMDLHALVEFIYHGEVNVH 96
>AE014298-234|AAF45650.2| 628|Drosophila melanogaster CG11491-PD,
isoform D protein.
Length = 628
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 174 LKSSHLFHPS*LMSQINHLHFNSLHNIIFHKNMNRH 67
LKS+ HP L+ +N + ++L I+H +N H
Sbjct: 61 LKSTPCKHPVILLQDVNFMDLHALVEFIYHGEVNVH 96
>AE014298-233|AAF45651.2| 702|Drosophila melanogaster CG11491-PA,
isoform A protein.
Length = 702
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 174 LKSSHLFHPS*LMSQINHLHFNSLHNIIFHKNMNRH 67
LKS+ HP L+ +N + ++L I+H +N H
Sbjct: 61 LKSTPCKHPVILLQDVNFMDLHALVEFIYHGEVNVH 96
>AE014298-232|AAN09052.1| 502|Drosophila melanogaster CG11491-PF,
isoform F protein.
Length = 502
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 174 LKSSHLFHPS*LMSQINHLHFNSLHNIIFHKNMNRH 67
LKS+ HP L+ +N + ++L I+H +N H
Sbjct: 61 LKSTPCKHPVILLQDVNFMDLHALVEFIYHGEVNVH 96
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,384,400
Number of Sequences: 53049
Number of extensions: 395831
Number of successful extensions: 769
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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