Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2362
         (544 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.7  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   4.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   4.0  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   5.3  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 305  NITLTTIYLILCVYC 261
            N+ L  +YL LC +C
Sbjct: 1126 NVLLNCVYLFLCGFC 1140


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2

Query: 437 YRVLLHVLIYRLSTWGPGKYD 499
           Y VLLH L Y LS     +YD
Sbjct: 178 YVVLLHFLTYNLSLGIKLRYD 198


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2

Query: 437 YRVLLHVLIYRLSTWGPGKYD 499
           Y VLLH L Y LS     +YD
Sbjct: 178 YVVLLHFLTYNLSLGIKLRYD 198


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 491 YPAPMYLIYILIREAKLCSPFYNNCAVGGI 402
           YP  M+LIY +     +    Y N  + GI
Sbjct: 35  YPVLMFLIYTITEIYSVYERRYMNAHLSGI 64


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,870
Number of Sequences: 336
Number of extensions: 2362
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)