Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2361
         (699 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7B5J0 Cluster: Putative uncharacterized protein; n=1; ...    35   2.2  
UniRef50_UPI0000498AFC Cluster: hypothetical protein 59.t00005; ...    34   3.9  
UniRef50_Q0TTT0 Cluster: ABC transporter, permease/ATP-binding p...    34   3.9  
UniRef50_Q8I3T3 Cluster: Putative uncharacterized protein PFE087...    33   5.1  
UniRef50_Q7Q602 Cluster: ENSANGP00000030952; n=2; Culicidae|Rep:...    33   6.7  

>UniRef50_A7B5J0 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus gnavus ATCC 29149|Rep: Putative
           uncharacterized protein - Ruminococcus gnavus ATCC 29149
          Length = 390

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 16/27 (59%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
 Frame = -1

Query: 633 LVSLYMYNYRTLHICNLYS-GLHVIQG 556
           LV LY+YNY T  I N+YS G+ +IQG
Sbjct: 324 LVFLYVYNYSTTQIINMYSIGIELIQG 350


>UniRef50_UPI0000498AFC Cluster: hypothetical protein 59.t00005;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 59.t00005 - Entamoeba histolytica HM-1:IMSS
          Length = 612

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = -1

Query: 660 YITLLDKLLLVSLYM-YNYRTLHICNLYSGLHVI 562
           +I++L  LLLV     YNY+TL IC ++S  HVI
Sbjct: 467 FISILTTLLLVYFNCSYNYKTLIICIVFSSFHVI 500


>UniRef50_Q0TTT0 Cluster: ABC transporter, permease/ATP-binding
           protein; n=5; Clostridiales|Rep: ABC transporter,
           permease/ATP-binding protein - Clostridium perfringens
           (strain ATCC 13124 / NCTC 8237 / Type A)
          Length = 765

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 5/47 (10%)
 Frame = +3

Query: 423 FHSKENKIKGDSN----DKG-VSFSENEEYIKSCPSVDQENMTECSS 548
           F SK+ K K +SN    DKG +S SE +EY+K  P++++EN+ + ++
Sbjct: 68  FMSKDEKEKVESNYTLLDKGNLSQSEYDEYVKDYPALEKENICKLNT 114


>UniRef50_Q8I3T3 Cluster: Putative uncharacterized protein PFE0875c;
           n=2; Plasmodium|Rep: Putative uncharacterized protein
           PFE0875c - Plasmodium falciparum (isolate 3D7)
          Length = 895

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
 Frame = -1

Query: 684 FFKFFIN*YITLLDKLLLVSLYMYNYRTLHICNLYS----GLHVIQGTVKKN 541
           FF FF   YI L+ K + + +Y++ Y  +++ NLY+     L+ I  T+ +N
Sbjct: 21  FFFFFFFFYILLIHKYIYIYMYIFIYAFIYLLNLYTPMMQKLNTIMNTLGEN 72


>UniRef50_Q7Q602 Cluster: ENSANGP00000030952; n=2; Culicidae|Rep:
           ENSANGP00000030952 - Anopheles gambiae str. PEST
          Length = 154

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 23/82 (28%), Positives = 36/82 (43%)
 Frame = +3

Query: 399 VLANNNMDFHSKENKIKGDSNDKGVSFSENEEYIKSCPSVDQENMTECSSLLSLV*HVTR 578
           V +NN     +K  KI  D++   V+ + + +   S  +    N T C+ L +     T 
Sbjct: 16  VNSNNPEVTPTKLEKISSDTDRSAVTINSSSK--SSSDTSHCPNDTLCTDLPNSCLQCTY 73

Query: 579 SIDCRYGGFYNYTCTVKPKVVC 644
           +  C YG   N TC  K  V+C
Sbjct: 74  NPQCVYGAEINVTCVPKTNVLC 95


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,622,627
Number of Sequences: 1657284
Number of extensions: 10697217
Number of successful extensions: 24938
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24877
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)