Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2361
         (699 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0223 + 1453478-1453750,1455788-1456018,1456066-1456200,145...    29   2.7  
01_01_0089 - 699533-699643,699738-700046,700134-700220,700298-70...    29   3.5  

>02_01_0223 +
           1453478-1453750,1455788-1456018,1456066-1456200,
           1457918-1457971,1458417-1458482,1458593-1458679,
           1459338-1459394,1459470-1459500,1459577-1459634,
           1459710-1459761,1459881-1459917,1460008-1460210,
           1460556-1460633,1460683-1460853,1461126-1461239
          Length = 548

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +3

Query: 405 ANNNMDFHSKENKIKGD-SNDKGVSFSENEEYIKSCPS 515
           AN+  D HSKEN +K D S+  G+S +   + +   P+
Sbjct: 344 ANSQNDSHSKENDVKEDGSSQNGISHTALNQNMSMAPT 381


>01_01_0089 - 699533-699643,699738-700046,700134-700220,700298-700469,
            700547-701373,701487-701559,701993-702078,702153-702227,
            702308-702548,702905-703239,703328-703414,703497-703640,
            703714-704670
          Length = 1167

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +3

Query: 402  LANNNMDFHSKENKIKGDSNDKGVSFSENE-EYIKSC 509
            + N  +D   K NK+ GD N K VSF E    +  SC
Sbjct: 1063 IKNFALDLGKKLNKVLGDCNYKTVSFDEKSLSFFPSC 1099


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,594,018
Number of Sequences: 37544
Number of extensions: 246710
Number of successful extensions: 453
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)