Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2361
         (699 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    27   0.75 
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    27   0.75 
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   9.2  

>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 26.6 bits (56), Expect = 0.75
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 656 SPYLTNYFWFHCTCIIIEPSISAIYTPGYML 564
           +P  TN  W HC C++ +     I T   M+
Sbjct: 184 TPNATNTVWSHCQCVLADGVERGILTVNRMI 214


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 26.6 bits (56), Expect = 0.75
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 656 SPYLTNYFWFHCTCIIIEPSISAIYTPGYML 564
           +P  TN  W HC C++ +     I T   M+
Sbjct: 184 TPNATNTVWSHCQCVLADGVERGILTVNRMI 214


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +3

Query: 432 KENKIKGDSNDKGVSFSEN-EEY 497
           KE +IK   N + VSF+EN  EY
Sbjct: 17  KEQRIKAAINRERVSFTENLREY 39


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,159
Number of Sequences: 2352
Number of extensions: 11988
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)