Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2361
         (699 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC008873-1|AAH08873.1|  221|Homo sapiens TM2 domain containing 3...    31   3.0  
AK026257-1|BAB15415.1|  221|Homo sapiens protein ( Homo sapiens ...    31   3.0  
AF353992-1|AAK35066.1|  221|Homo sapiens BBP-like protein 2 prot...    31   3.0  
BC006150-1|AAH06150.1|  247|Homo sapiens TM2 domain containing 3...    31   4.0  

>BC008873-1|AAH08873.1|  221|Homo sapiens TM2 domain containing 3
           protein.
          Length = 221

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 19/59 (32%), Positives = 24/59 (40%)
 Frame = +3

Query: 468 GVSFSENEEYIKSCPSVDQENMTECSSLLSLV*HVTRSIDCRYGGFYNYTCTVKPKVVC 644
           G   +E   Y+  CPS        CS L +     T +  C YG    + C VKP V C
Sbjct: 29  GGESTEIPPYVMKCPSNGL-----CSRLPADCIDCTTNFSCTYGKPVTFDCAVKPSVTC 82


>AK026257-1|BAB15415.1|  221|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22604 fis, clone HSI04630. ).
          Length = 221

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 19/59 (32%), Positives = 24/59 (40%)
 Frame = +3

Query: 468 GVSFSENEEYIKSCPSVDQENMTECSSLLSLV*HVTRSIDCRYGGFYNYTCTVKPKVVC 644
           G   +E   Y+  CPS        CS L +     T +  C YG    + C VKP V C
Sbjct: 29  GGESTEIPPYVMKCPSNGL-----CSRLPADCIDCTTNFSCTYGKPVTFDCAVKPSVTC 82


>AF353992-1|AAK35066.1|  221|Homo sapiens BBP-like protein 2
           protein.
          Length = 221

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 19/59 (32%), Positives = 24/59 (40%)
 Frame = +3

Query: 468 GVSFSENEEYIKSCPSVDQENMTECSSLLSLV*HVTRSIDCRYGGFYNYTCTVKPKVVC 644
           G   +E   Y+  CPS        CS L +     T +  C YG    + C VKP V C
Sbjct: 29  GGESTEIPPYVMKCPSNGL-----CSRLPADCIDCTTNFSCTYGKPVTFDCAVKPSVTC 82


>BC006150-1|AAH06150.1|  247|Homo sapiens TM2 domain containing 3
           protein.
          Length = 247

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 18/55 (32%), Positives = 23/55 (41%)
 Frame = +3

Query: 480 SENEEYIKSCPSVDQENMTECSSLLSLV*HVTRSIDCRYGGFYNYTCTVKPKVVC 644
           +E   Y+  CPS        CS L +     T +  C YG    + C VKP V C
Sbjct: 59  TEIPPYVMKCPSNGL-----CSRLPADCIDCTTNFSCTYGKPVTFDCAVKPSVTC 108


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,206,782
Number of Sequences: 237096
Number of extensions: 1616170
Number of successful extensions: 2108
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2108
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)