Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2361
         (699 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80448-7|AAB37820.1|  260|Caenorhabditis elegans Hypothetical pr...    29   2.4  
U23526-1|AAK95866.1|  252|Caenorhabditis elegans Claudin-like in...    28   5.6  
AF252604-1|AAF67350.1|  252|Caenorhabditis elegans Gas3/PMP22-li...    28   5.6  
Z92804-1|CAB07252.1|  338|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z74475-6|CAA98961.1|  299|Caenorhabditis elegans Hypothetical pr...    27   9.8  
AL023811-2|CAA19423.1|  299|Caenorhabditis elegans Hypothetical ...    27   9.8  

>U80448-7|AAB37820.1|  260|Caenorhabditis elegans Hypothetical
           protein F59A3.7 protein.
          Length = 260

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 7/37 (18%)
 Frame = -1

Query: 150 FLRLRIC-------LFSLPISVTCIVFIITNKIKIKQ 61
           FL L++C       LFSLP   TC +FI + ++K KQ
Sbjct: 44  FLVLKLCIESSISILFSLPFVSTCFIFIFSLRMKSKQ 80


>U23526-1|AAK95866.1|  252|Caenorhabditis elegans Claudin-like in
           caenorhabditisprotein 2 protein.
          Length = 252

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/46 (23%), Positives = 24/46 (52%)
 Frame = +2

Query: 14  ISSMHRTLPLRISIRDCFILILLVIMNTIHVTDMGKENKQILSRRN 151
           I   HR     I++   F+ ++ +I++ +HV    + +   +SR+N
Sbjct: 162 IYEKHRGYSWYIALTGAFVYLVAIILSVVHVLLQARNSNTTMSRQN 207


>AF252604-1|AAF67350.1|  252|Caenorhabditis elegans Gas3/PMP22-like
           protein protein.
          Length = 252

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/46 (23%), Positives = 24/46 (52%)
 Frame = +2

Query: 14  ISSMHRTLPLRISIRDCFILILLVIMNTIHVTDMGKENKQILSRRN 151
           I   HR     I++   F+ ++ +I++ +HV    + +   +SR+N
Sbjct: 162 IYEKHRGYSWYIALTGAFVYLVAIILSVVHVLLQARNSNTTMSRQN 207


>Z92804-1|CAB07252.1|  338|Caenorhabditis elegans Hypothetical
           protein K05D4.2 protein.
          Length = 338

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +2

Query: 41  LRISIRDCFILILLVIMN 94
           LR S+R+CF+ ILLV+ N
Sbjct: 127 LRFSLRNCFLWILLVLSN 144


>Z74475-6|CAA98961.1|  299|Caenorhabditis elegans Hypothetical
           protein C51F7.2 protein.
          Length = 299

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = -1

Query: 219 FLCICAAKGIKENSSVILHIEY*FLRLRIC--LFSLPISVTCIVFIITNKIKI 67
           F+CIC A  I  N++ ++ +    ++ +     F L +S+TC+V +I   I I
Sbjct: 183 FMCICMAISILSNTTSVIFLRNLNIQRKKAETNFLLIMSITCLVQLIGTIISI 235


>AL023811-2|CAA19423.1|  299|Caenorhabditis elegans Hypothetical
           protein C51F7.2 protein.
          Length = 299

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = -1

Query: 219 FLCICAAKGIKENSSVILHIEY*FLRLRIC--LFSLPISVTCIVFIITNKIKI 67
           F+CIC A  I  N++ ++ +    ++ +     F L +S+TC+V +I   I I
Sbjct: 183 FMCICMAISILSNTTSVIFLRNLNIQRKKAETNFLLIMSITCLVQLIGTIISI 235


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,169,961
Number of Sequences: 27780
Number of extensions: 274706
Number of successful extensions: 640
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)