Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2360
(663 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 280 1e-76
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 269 2e-73
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 239 2e-64
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 232 3e-62
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 173 1e-44
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 100 4e-22
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 82 6e-17
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 56 6e-09
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 30 0.26
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.79
SPBC23E6.05 |arx1||ribosomal export complex Arx1 |Schizosaccharo... 26 4.2
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 4.2
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 26 5.6
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 7.4
SPBC25H2.05 |egd2|nac1|nascent polypeptide-associated complex al... 25 7.4
SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|... 25 9.7
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 280 bits (687), Expect = 1e-76
Identities = 138/195 (70%), Positives = 156/195 (80%)
Frame = +3
Query: 78 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 257
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 258 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 437
TIFDAKRLIGRKF+D VQ+DMKHWPF+V+S GKP ++V YKGE KTF PEE+SSMVL
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLM 123
Query: 438 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGPSLA*TFSESSMNRLVAAICLRS 617
KM+ETAEAYLG V +AV+TVPAYFNDSQRQATKDAG +A +N AA
Sbjct: 124 KMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAG-LIAGLNVLRIINEPTAAAIAYG 182
Query: 618 *PKKGTGERNVLFFD 662
+ GE NVL FD
Sbjct: 183 LDRSNQGESNVLIFD 197
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 269 bits (660), Expect = 2e-73
Identities = 133/195 (68%), Positives = 153/195 (78%)
Frame = +3
Query: 78 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 257
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 258 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 437
TIFDAKRLIGR+F D VQ+DMKHWPF+V+ GKP I+V +KGE KTF PEE+SSMVL
Sbjct: 64 TIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLL 123
Query: 438 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGPSLA*TFSESSMNRLVAAICLRS 617
KM+E+AEA+LG V +AV+TVPAYFNDSQRQATKDAG +A +N AA
Sbjct: 124 KMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAG-LIAGLNVLRIINEPTAAAIAYG 182
Query: 618 *PKKGTGERNVLFFD 662
+ E NVL FD
Sbjct: 183 LDRSNQHETNVLIFD 197
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 239 bits (586), Expect = 2e-64
Identities = 119/195 (61%), Positives = 143/195 (73%)
Frame = +3
Query: 78 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 257
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP N
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67
Query: 258 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 437
T+FDAKRLIGR++ED Q D+KHWPF+V+ + G P I+V Y GE K F +E+S+MVLT
Sbjct: 68 TVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLT 127
Query: 438 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGPSLA*TFSESSMNRLVAAICLRS 617
KMKE +EA L K V+ AVITVPAYF+DSQR ATKDAG ++A +N AA
Sbjct: 128 KMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAG-AIAGLNVLRIINEPTAAAIAYG 186
Query: 618 *PKKGTGERNVLFFD 662
K +NVL FD
Sbjct: 187 LDAKSDKPKNVLIFD 201
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 232 bits (568), Expect = 3e-62
Identities = 105/156 (67%), Positives = 131/156 (83%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 260
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP NT
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 261 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTK 440
IFD KRLIGRKF++ T+ D+K +PF +V+D +P ++V G+ K F PEE+S+M+L+K
Sbjct: 98 IFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSK 157
Query: 441 MKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 548
MK+TAEAYLGK V +AV+TVPAYFND+QRQATKDAG
Sbjct: 158 MKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAG 193
Score = 29.9 bits (64), Expect = 0.34
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +2
Query: 536 KRCRSISGLNVLRIINEPT 592
K +I+GLNV+RI+NEPT
Sbjct: 190 KDAGTIAGLNVIRIVNEPT 208
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 173 bits (422), Expect = 1e-44
Identities = 84/161 (52%), Positives = 110/161 (68%), Gaps = 1/161 (0%)
Frame = +3
Query: 69 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 245
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 246 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSS 425
NP NT F KRLIGR+F++ VQ D+K P+++V + KT+ P ++
Sbjct: 109 NPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYSPSQIGG 165
Query: 426 MVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 548
+L+KM+ETA YLGK V+NAV+TVPAYFNDSQRQATK AG
Sbjct: 166 FILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAG 206
Score = 30.7 bits (66), Expect = 0.20
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +2
Query: 536 KRCRSISGLNVLRIINEPT 592
K +I+GLNVLR++NEPT
Sbjct: 203 KAAGAIAGLNVLRVVNEPT 221
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 99.5 bits (237), Expect = 4e-22
Identities = 53/161 (32%), Positives = 91/161 (56%), Gaps = 1/161 (0%)
Frame = +3
Query: 66 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 245
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 246 NPNNTIFDAKRLIGRKFEDATVQ-ADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 422
N NT+ KRL GR ++D ++ + ++ G KV Y E+ F ++
Sbjct: 63 NFRNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLI 122
Query: 423 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDA 545
+ TK+K AEA L +V + VI++PA+F D QR+A +A
Sbjct: 123 AAYFTKIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEA 163
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 82.2 bits (194), Expect = 6e-17
Identities = 45/161 (27%), Positives = 85/161 (52%), Gaps = 6/161 (3%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 260
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N +N+
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNS 86
Query: 261 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGE------DKTFFPEEVS 422
+ + + L+G+ ++ T+ H+ V+ G+ K+ + + +K E S
Sbjct: 87 VTNFRDLLGKSHDELTLH--HCHYSANPVNVEGQIGFKITVQEDEESDPKEKILTAHEAS 144
Query: 423 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDA 545
L ++ E+AE +LG V V++VP YF D+QR+A + A
Sbjct: 145 VRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESA 185
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 55.6 bits (128), Expect = 6e-09
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 3/158 (1%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 257
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P +
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAH 84
Query: 258 TIFDAKRLIGRK-FEDATVQADMKHWPFEVVSDGGKPKIKVAYK-GEDKTFFPEEVSSMV 431
+I + K L+ E VQ +P + + + +++ +++ + EE+ +M
Sbjct: 85 SIRNVKELLDTAGLESVLVQKYQSSYPAIQLVENEETTSGISFVISDEENYSLEEIIAMT 144
Query: 432 LTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDA 545
+ AE + + + V+TVP +FN+ QR +A
Sbjct: 145 MEHYISLAEEMAHEKITDLVLTVPPHFNELQRSILLEA 182
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 30.3 bits (65), Expect = 0.26
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +3
Query: 186 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKP 365
+ F+D E GD A + P + AK L+G+ + + D P++V+ D P
Sbjct: 125 IIFSDDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPYQVLYDRLGP 184
Query: 366 KIKVAYKGEDKTFFPE 413
+K+ G + F +
Sbjct: 185 -LKLMIDGTVRNFIAQ 199
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.79
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 73 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 168
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPBC23E6.05 |arx1||ribosomal export complex Arx1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 417
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 648 HFVPQYPFLVKTVSKSQQPVGSLMIRRTFKPEMDLH 541
H +P+ +L+ +S S QP+ SL KP + +H
Sbjct: 258 HVMPKEAWLID-ISMSSQPISSLKEHPDLKPTLYIH 292
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.2 bits (55), Expect = 4.2
Identities = 21/103 (20%), Positives = 46/103 (44%)
Frame = -3
Query: 601 AATSRFIDDSENVQARDGPASFVACL*ESLKYAGTVITAFCTVLPR*ASAVSFIFVSTME 422
++TS S ++ + ++F + S + I++ T+L + S + +S+
Sbjct: 582 SSTSSPSSTSLSISSSSTSSTFSSASTSSPSSISSSISSSSTILSSPTPSTSSLMISSSS 641
Query: 421 LTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSN 293
+ S +LSS + + + SL+T S+ T+ SS+
Sbjct: 642 IISGSSSILSSSIST---IPISSSLSTYSSSVIPSSSTLVSSS 681
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.8 bits (54), Expect = 5.6
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -1
Query: 159 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQLSKRARL 1
G W SP S + H ++++ +F +RVL C+ L K +K+A L
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCMI-----LIWKSFAKQALL 323
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.4 bits (53), Expect = 7.4
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +2
Query: 59 QNGKSTRSRNRSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCRQEPG 238
+NGK T +R +S + W P++E R G D + V R + + +EP
Sbjct: 477 RNGKKTPTRTKSRMQQFINWFKPSKE----RSSNGNSDSASPPPVPRLSITRSQVSREP- 531
Query: 239 GDEPQQ 256
++P++
Sbjct: 532 -EKPEE 536
>SPBC25H2.05 |egd2|nac1|nascent polypeptide-associated complex alpha
subunit Egd2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +3
Query: 417 VSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATK 539
++ ++ K A LGK + FN+SQ+QAT+
Sbjct: 57 INEPIVYKSSNNAYIVLGKVTVEDMAAQARAFNESQKQATE 97
>SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 330
Score = 25.0 bits (52), Expect = 9.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -2
Query: 389 TLICYLDLRFASITDNLERPVLHVGLHSSIFELTSDETFGI 267
T I L + S+TDN+ER + +G + I +TS F +
Sbjct: 142 TNIALLLATYPSVTDNIER-FIFMGGSTGIGNITSQAEFNV 181
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,926,603
Number of Sequences: 5004
Number of extensions: 62328
Number of successful extensions: 197
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 189
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 301829700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -