Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2359
(654 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 37 0.012
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 32 0.35
01_01_0718 - 5578959-5580761,5583683-5584160,5584239-5584267 31 0.80
03_01_0546 - 4089502-4089661,4089959-4090025,4091243-4091684 31 1.1
12_02_1174 - 26696869-26698191 30 1.4
01_06_0917 + 32978306-32978434,32978570-32978645,32979324-329793... 30 1.4
01_06_0916 + 32950575-32950656,32952061-32952272,32952408-329524... 30 1.4
06_03_1370 + 29645598-29646288,29646364-29646752 30 1.9
12_02_0643 - 21461123-21461902 29 2.4
04_04_1466 - 33799104-33799229,33799659-33799669,33800052-338002... 29 2.4
11_06_0331 - 22417469-22418071 29 3.2
06_01_1124 + 9264206-9264234,9264784-9266185 29 3.2
09_01_0037 - 604001-604957 29 4.3
04_04_0651 - 26952360-26952437,26952923-26952999,26954072-269543... 29 4.3
04_01_0086 - 946630-947115 29 4.3
12_02_0665 + 21670956-21671834,21672563-21672583 28 5.6
12_02_0299 - 17051570-17052474,17053542-17053755 28 5.6
11_01_0682 - 5575297-5575308,5575391-5575516,5575779-5575885,557... 28 7.5
01_06_1805 - 39999987-40000169,40000648-40000974,40001724-400020... 28 7.5
01_01_0720 - 5593311-5595371,5597550-5598027,5598118-5598146 28 7.5
10_02_0035 - 4429737-4429781,4430769-4430890,4431000-4431297,443... 27 9.9
08_02_1483 - 27451391-27451794,27451883-27452387 27 9.9
06_03_0927 + 26015956-26018230,26018323-26018471,26018550-260186... 27 9.9
06_01_1018 - 7964752-7964847,7964976-7967048 27 9.9
03_06_0771 - 36152554-36153215,36153320-36153818,36153924-36153956 27 9.9
03_06_0242 + 32596846-32597268 27 9.9
03_05_0019 + 19862171-19863049 27 9.9
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 37.1 bits (82), Expect = 0.012
Identities = 28/104 (26%), Positives = 32/104 (30%)
Frame = +2
Query: 125 PPHLGTQRSWTLCSRNSSDFVIHSSPQSFWLSRPITLRALSKTPPCSXXXXXXXXXXXXX 304
PP G+ + V H SP L P A PP
Sbjct: 504 PPPCGSLSILSTDENQLPPEVQHESPSDRKLPSPSPTAAAPPPPPPPPPPPSGNKPAFSP 563
Query: 305 XXAPQPPSCLPFPRRLYWRVKLLRRPPWPPFQLCDHPRPPSRPP 436
P PP P P+ Y + PP PP C P PP PP
Sbjct: 564 PPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPP 607
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 32.3 bits (70), Expect = 0.35
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 5/46 (10%)
Frame = +2
Query: 314 PQPPSCLPFPRRLYWRVK-----LLRRPPWPPFQLCDHPRPPSRPP 436
P PP P P R + R+ LL PP PP + P PP PP
Sbjct: 72 PPPPPPAPRPPRRHHRIPPPPPPLLPTPPPPPASISPTPAPPLPPP 117
>01_01_0718 - 5578959-5580761,5583683-5584160,5584239-5584267
Length = 769
Score = 31.1 bits (67), Expect = 0.80
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 353 YWRVKLLRRPPWPPFQLCDHPRPPSRPPK 439
+W +L PP PP+ L P PP P K
Sbjct: 45 WWADELATAPPLPPWSLSPSPSPPPPPTK 73
>03_01_0546 - 4089502-4089661,4089959-4090025,4091243-4091684
Length = 222
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 320 PPSCLPFPRRLYWRVKLLRRPPWPP 394
PPSC P RL++ ++ ++ PP PP
Sbjct: 42 PPSCASQPHRLFFFLRTVQPPPSPP 66
>12_02_1174 - 26696869-26698191
Length = 440
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +2
Query: 311 APQPPSCLPFPRRLYWRVKLLRRPPWPPFQLCDHPRPPSRPP 436
+P PPS LP P YW + PP P PPS PP
Sbjct: 266 SPPPPSPLPPPPEDYWSPTAVT----PPEPTKPKPPPPSPPP 303
>01_06_0917 +
32978306-32978434,32978570-32978645,32979324-32979391,
32979868-32979959,32980121-32980194,32980372-32980415,
32980752-32980803,32981200-32981319,32981391-32981503,
32981674-32981761,32982144-32982229,32982832-32982918,
32983149-32983252,32983607-32983709,32983861-32983956,
32984067-32984256,32984352-32984413,32984560-32984664,
32985163-32985364,32985473-32985681,32986413-32986537,
32986644-32986695,32986772-32986858,32987125-32987247,
32987375-32987629
Length = 913
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 499 EVDLAPAHRRMDLPWYKRVRSVPRSLEGGPG 591
E D +R D+ +KR R + RSL+GGPG
Sbjct: 878 EADAPKTYRITDIFGFKRSRPLYRSLKGGPG 908
>01_06_0916 + 32950575-32950656,32952061-32952272,32952408-32952448,
32952916-32952959,32953259-32953561,32954145-32954302,
32954849-32954965,32955562-32955747,32955872-32956031,
32956079-32956151,32958613-32958889,32959024-32959099,
32960653-32960720,32961270-32961361,32961505-32961578,
32961777-32961820,32962155-32962206,32962585-32962704,
32962777-32962889,32963023-32963110,32963492-32963577,
32964172-32964258,32964491-32964594,32964996-32965098,
32965250-32965345,32965456-32965645,32965777-32965838,
32966014-32966118,32966782-32966983,32967092-32967300,
32968510-32968673,32968799-32968850,32968935-32969021,
32969319-32969441,32969567-32969605,32969606-32969860
Length = 1447
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 499 EVDLAPAHRRMDLPWYKRVRSVPRSLEGGPG 591
E D +R D+ +KR R + RSL+GGPG
Sbjct: 1412 EADTPKTYRITDIFGFKRSRPLYRSLKGGPG 1442
>06_03_1370 + 29645598-29646288,29646364-29646752
Length = 359
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -2
Query: 644 CKTTASNCNTTHYRANWVPGPPSRLRGTLLTLLYQGKSIRR*AGA 510
C++ +C TH ++ WVP R R L L++G + A A
Sbjct: 153 CRSRGFSC-ATHVKSTWVPAAKRRERQQQLAALFRGAAANNSAAA 196
>12_02_0643 - 21461123-21461902
Length = 259
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +2
Query: 317 QPPSCLPFPRRLYWRVKLLRRPPWPPFQLCDHPRPPSRPPK 439
+PPS P P R L RP PP PRPP+ PP+
Sbjct: 198 RPPSRTPPPERRESPSPLRGRPRTPP---PPRPRPPTTPPR 235
>04_04_1466 -
33799104-33799229,33799659-33799669,33800052-33800200,
33800261-33800299,33800690-33800746,33800839-33801628,
33801705-33801980,33802051-33802117,33802211-33802285,
33802618-33802812,33802927-33803076,33803152-33803522,
33804070-33804193,33804246-33804275,33804306-33804417,
33804919-33804985,33805138-33805180,33805768-33805872
Length = 928
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 383 PWPPFQLCDHPRPPSRPP 436
PWPP P PPS PP
Sbjct: 13 PWPPHHAAAQPPPPSYPP 30
>11_06_0331 - 22417469-22418071
Length = 200
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +2
Query: 332 LPFPRRLYWRVKLLRRPPWPPFQLCDHPRPPSR 430
+P P + L+R PWP F+ D P R
Sbjct: 89 VPMPENFVAMILALKREPWPTFEYLDSLSPEKR 121
>06_01_1124 + 9264206-9264234,9264784-9266185
Length = 476
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 83 VGASPQGECLQDPGPPHLG-TQRSWTLCSRNSSDFVIHSSPQSFWLSRP 226
VG QGE P HL WT ++ S D+V+ S+ S W +RP
Sbjct: 249 VGPERQGEVFAGPSDLHLDEPDERWTSAAK-SHDYVVLSA--SHWFARP 294
>09_01_0037 - 604001-604957
Length = 318
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/40 (45%), Positives = 20/40 (50%)
Frame = +2
Query: 314 PQPPSCLPFPRRLYWRVKLLRRPPWPPFQLCDHPRPPSRP 433
P PPS +P P R + PP PFQL P PP RP
Sbjct: 232 PPPPSQMPPPTPSCVR----QEPPQMPFQL--QPPPPPRP 265
>04_04_0651 -
26952360-26952437,26952923-26952999,26954072-26954300,
26954926-26955537
Length = 331
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +2
Query: 14 FSLSCSNRAASPPVFNRTAQVREVGASPQGECLQDPGPPHLGTQR 148
++L + SPP + + G S GEC+ DP P T R
Sbjct: 33 YTLELPSDGVSPPSLVKYEAPADTG-STDGECVSDPSPGRASTNR 76
>04_01_0086 - 946630-947115
Length = 161
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 49 TCVQ*NRSGPRSWGLAARRV-SSRPGAAPPGHSAIMDAVFAEFLRLRHPQLAS 204
TC+ R G RR SS GAAPP S+++D V LRL AS
Sbjct: 16 TCIPRLRGGGGGGARRHRRAASSGGGAAPPVSSSVLDRVRDVVLRLAMLSAAS 68
>12_02_0665 + 21670956-21671834,21672563-21672583
Length = 299
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +2
Query: 314 PQPPSCLPFPRRLYWRVKLLRRPPWPPFQLCDHPRPPSRP 433
P P S LPF R+ L R P P F L P+ S P
Sbjct: 31 PSPASPLPFASRVSSAAPLRHRLPPPRFSLSPIPKTLSSP 70
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +2
Query: 314 PQPPSCLPFPRRLYWRVKLLRRPPWPPFQLCDHPRPPSRPP 436
P PP PFP L PP P F P PP PP
Sbjct: 291 PPPPPAFPFP--FPQLPPLPHFPPLPSFYPSPPPPPPPPPP 329
>11_01_0682 -
5575297-5575308,5575391-5575516,5575779-5575885,
5575911-5576013,5576122-5576187,5576378-5576461,
5577448-5577522,5577615-5577668,5577752-5577895,
5578632-5578685,5578877-5578981,5579076-5579173,
5579660-5579729,5580444-5580566,5580647-5580727,
5580996-5581476,5581684-5581816,5582550-5582598,
5582704-5582892,5583642-5583703,5583762-5585316
Length = 1256
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 201 GELWMTKSEEFREHSVHDR*VPRW 130
GE+W K E R SVH + +P W
Sbjct: 865 GEIWAVKRERIRRSSVHGK-LPGW 887
>01_06_1805 -
39999987-40000169,40000648-40000974,40001724-40002017,
40002112-40002231,40002714-40002776,40003150-40003310,
40003864-40004035
Length = 439
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +2
Query: 47 PPVFNRTAQVREVGASPQGECLQDPGPPHLGTQRSW 154
P +FN A R P GPP+ GT SW
Sbjct: 197 PELFNAMASSRGSPIYPSVHSSATAGPPYTGTMASW 232
>01_01_0720 - 5593311-5595371,5597550-5598027,5598118-5598146
Length = 855
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +2
Query: 353 YWRVKLLRRPPWPPFQLCDHPRPPSRPP 436
+W +L PP PP P PP PP
Sbjct: 45 WWADELAAAPPLPPRSPSPSPSPPPPPP 72
>10_02_0035 -
4429737-4429781,4430769-4430890,4431000-4431297,
4431644-4431682
Length = 167
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1
Query: 67 RSGPRSWGLAARRVSSRPGAAPPGHSAI 150
+ G RS G AAR S R GAA P S +
Sbjct: 42 QGGARSCGAAARGSSDRQGAAAPRGSGV 69
>08_02_1483 - 27451391-27451794,27451883-27452387
Length = 302
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 644 CKTTASNCNTTHYRANWVPGPPSRLRGTLL 555
CK+ +C TH ++ WVP R R LL
Sbjct: 114 CKSRGFDC-ATHVKSTWVPAAKRRERQNLL 142
>06_03_0927 +
26015956-26018230,26018323-26018471,26018550-26018618,
26018701-26018853,26018927-26019090,26019207-26019354,
26020348-26020470,26020560-26020647,26020781-26020950
Length = 1112
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 320 PPSCLPFPRRLYWRVKLLRRPPWPPFQLCDH 412
PP P P +R L + PP PP + DH
Sbjct: 235 PPQANPQPEAARYRQPLSQLPPLPPVFMNDH 265
>06_01_1018 - 7964752-7964847,7964976-7967048
Length = 722
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 401 LCDHPRPPSRPPKYLLV 451
LC HP P +RPP L+V
Sbjct: 632 LCTHPAPAARPPMRLVV 648
>03_06_0771 - 36152554-36153215,36153320-36153818,36153924-36153956
Length = 397
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +2
Query: 314 PQPPSCLPFPRRLYWRVKLLRRPPWPPFQLCDHPRP 421
P PP P P Y +L RPP PP QL P
Sbjct: 356 PPPPPPPPPPPVYYSSYVMLDRPPPPPPQLFSDENP 391
>03_06_0242 + 32596846-32597268
Length = 140
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 413 PRPPSRPPKYLLVGH 457
PRPP PPKY GH
Sbjct: 43 PRPPGPPPKYQQPGH 57
>03_05_0019 + 19862171-19863049
Length = 292
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 374 RRPPWPPFQLCDHPRPPSRPPK 439
+RPP PP + +PP PPK
Sbjct: 174 KRPPEPPPKTTQRQQPPGPPPK 195
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,881,371
Number of Sequences: 37544
Number of extensions: 395137
Number of successful extensions: 1467
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1463
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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