Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2356
(566 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46267-16|CAO78720.1| 576|Caenorhabditis elegans Hypothetical p... 32 0.25
Z46267-4|CAD45594.1| 517|Caenorhabditis elegans Hypothetical pr... 32 0.25
Z46267-3|CAA86421.3| 522|Caenorhabditis elegans Hypothetical pr... 32 0.25
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.76
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.76
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.76
AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical ... 28 4.1
Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical p... 27 7.1
U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical pr... 27 7.1
U64853-1|AAB04974.2| 517|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z74473-2|CAA98949.2| 319|Caenorhabditis elegans Hypothetical pr... 27 9.4
AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical ... 27 9.4
>Z46267-16|CAO78720.1| 576|Caenorhabditis elegans Hypothetical
protein F49E2.2c protein.
Length = 576
Score = 32.3 bits (70), Expect = 0.25
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 2/156 (1%)
Frame = +3
Query: 12 VYGENGAYYKAIVT-DVLDNEVLVAFENDWQPESKFPFSQVFLPPKDTGKHTEFTENQEV 188
V G N A+ K I D L ++V + N + + K F++ K K Q++
Sbjct: 147 VQGVN-AHQKVITEFDALAHKVH-DYSNKEKDKLKTEFAEYKAKEKKLLKRKNGETEQDI 204
Query: 189 EVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLRVKLPKTPIDKNT 368
F ++KEA W A + MR F + W + Y EI + + + + +
Sbjct: 205 TAF---HKKEAASW--AKQQEMRYKFFNDKLQSWIHGYVEIGKLFQAQEVIVQPAVGSVI 259
Query: 369 FHKFEI-TVPDELKDYLHDIHSAKVENAHKEFQKAI 473
EI T+P++ KD+ D+H A +E ++ +
Sbjct: 260 AAPVEIETIPEDHKDWHQDLHEHAAVVAAEEIKENV 295
>Z46267-4|CAD45594.1| 517|Caenorhabditis elegans Hypothetical
protein F49E2.2b protein.
Length = 517
Score = 32.3 bits (70), Expect = 0.25
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 2/156 (1%)
Frame = +3
Query: 12 VYGENGAYYKAIVT-DVLDNEVLVAFENDWQPESKFPFSQVFLPPKDTGKHTEFTENQEV 188
V G N A+ K I D L ++V + N + + K F++ K K Q++
Sbjct: 93 VQGVN-AHQKVITEFDALAHKVH-DYSNKEKDKLKTEFAEYKAKEKKLLKRKNGETEQDI 150
Query: 189 EVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLRVKLPKTPIDKNT 368
F ++KEA W A + MR F + W + Y EI + + + + +
Sbjct: 151 TAF---HKKEAASW--AKQQEMRYKFFNDKLQSWIHGYVEIGKLFQAQEVIVQPAVGSVI 205
Query: 369 FHKFEI-TVPDELKDYLHDIHSAKVENAHKEFQKAI 473
EI T+P++ KD+ D+H A +E ++ +
Sbjct: 206 AAPVEIETIPEDHKDWHQDLHEHAAVVAAEEIKENV 241
>Z46267-3|CAA86421.3| 522|Caenorhabditis elegans Hypothetical
protein F49E2.2a protein.
Length = 522
Score = 32.3 bits (70), Expect = 0.25
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 2/156 (1%)
Frame = +3
Query: 12 VYGENGAYYKAIVT-DVLDNEVLVAFENDWQPESKFPFSQVFLPPKDTGKHTEFTENQEV 188
V G N A+ K I D L ++V + N + + K F++ K K Q++
Sbjct: 93 VQGVN-AHQKVITEFDALAHKVH-DYSNKEKDKLKTEFAEYKAKEKKLLKRKNGETEQDI 150
Query: 189 EVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLRVKLPKTPIDKNT 368
F ++KEA W A + MR F + W + Y EI + + + + +
Sbjct: 151 TAF---HKKEAASW--AKQQEMRYKFFNDKLQSWIHGYVEIGKLFQAQEVIVQPAVGSVI 205
Query: 369 FHKFEI-TVPDELKDYLHDIHSAKVENAHKEFQKAI 473
EI T+P++ KD+ D+H A +E ++ +
Sbjct: 206 AAPVEIETIPEDHKDWHQDLHEHAAVVAAEEIKENV 241
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 0.76
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +3
Query: 216 EACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLRVKLPKTPIDKNTFHKFEITVP 395
EA G T + +++ L E + Y +++ + L +TPID +KF VP
Sbjct: 567 EATGTETVLLSILQLMTLTNEDMSTKRSYMKLIETAISDILLHRTPIDPQADYKFVFEVP 626
Query: 396 -DELKDYLHDIHSA-KVENAHKEFQKAI 473
E+ D + D A KV A Q+A+
Sbjct: 627 VAEIIDKMQDEEMAKKVRQATSAKQEAV 654
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 0.76
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +3
Query: 216 EACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLRVKLPKTPIDKNTFHKFEITVP 395
EA G T + +++ L E + Y +++ + L +TPID +KF VP
Sbjct: 567 EATGTETVLLSILQLMTLTNEDMSTKRSYMKLIETAISDILLHRTPIDPQADYKFVFEVP 626
Query: 396 -DELKDYLHDIHSA-KVENAHKEFQKAI 473
E+ D + D A KV A Q+A+
Sbjct: 627 VAEIIDKMQDEEMAKKVRQATSAKQEAV 654
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 0.76
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +3
Query: 216 EACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLRVKLPKTPIDKNTFHKFEITVP 395
EA G T + +++ L E + Y +++ + L +TPID +KF VP
Sbjct: 150 EATGTETVLLSILQLMTLTNEDMSTKRSYMKLIETAISDILLHRTPIDPQADYKFVFEVP 209
Query: 396 -DELKDYLHDIHSA-KVENAHKEFQKAI 473
E+ D + D A KV A Q+A+
Sbjct: 210 VAEIIDKMQDEEMAKKVRQATSAKQEAV 237
>AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical
protein C02E7.6 protein.
Length = 70
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3
Query: 462 GTPCARSPPSRCGCRGGS 409
G CA PP CGC GG+
Sbjct: 26 GCGCAPPPPPACGCGGGA 43
>Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical
protein F44D12.1 protein.
Length = 1034
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2
Query: 172 VNSVCLPVSLGGKKT*ENGNFDSGCQSFSKATRTSLS 62
++ VCLP++ G NG F + C+ A+R+ L+
Sbjct: 273 ISDVCLPLNYGVGLELSNGVFINSCEPNGAASRSGLA 309
>U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical
protein F27C1.6 protein.
Length = 647
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +3
Query: 327 LRVKLPKTPIDKNTFHKFEITVPDELKDYLHDIHSAKVENAHKEFQKAIGAALV 488
L+ K+ T D + P K +H++ + A KE +K +G ALV
Sbjct: 289 LKAKVATTAEDSDGEAPTSTEDPQNKKKSIHELIKDAAQEAEKESRKQVGTALV 342
>U64853-1|AAB04974.2| 517|Caenorhabditis elegans Hypothetical
protein K11G9.3 protein.
Length = 517
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 144 KDTGKHTEFTENQEVEVFARSNE 212
KDTG H E T N+ +E ++R+ E
Sbjct: 326 KDTGDHFEATRNKIIEFYSRNVE 348
>Z74473-2|CAA98949.2| 319|Caenorhabditis elegans Hypothetical
protein F56H9.1 protein.
Length = 319
Score = 27.1 bits (57), Expect = 9.4
Identities = 22/78 (28%), Positives = 32/78 (41%)
Frame = -2
Query: 340 NFTLRRSLGTISV*QLSHSRYSITRKSPLIILIFAVHHPHASFSLDLANTSTSWFSVNSV 161
N L +++G Q ++ IT L+I H P S + L S SW +V +
Sbjct: 79 NTYLNQTMGLGMYLQGPITQMIITINRFLVIWFTPTHVPQYSHRITLGALSVSWITVTWL 138
Query: 160 CLPVSLGGKKT*ENGNFD 107
+ L G N NFD
Sbjct: 139 STLIGLPGFD--NNNNFD 154
>AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical
protein Y76B12C.4 protein.
Length = 252
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 90 NDWQPESKFPFSQVFLPPKDTGKHTEFTENQEVEVFARSNEKE 218
+DW PE K +V P++ K + E +E E A EKE
Sbjct: 33 DDWAPEKKKRAKKVPSKPREGPKLIDEFEEKESEKEAAEKEKE 75
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,797,475
Number of Sequences: 27780
Number of extensions: 273407
Number of successful extensions: 848
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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