Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2356
         (566 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    25   0.53 
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    23   1.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   2.8  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 22/84 (26%), Positives = 36/84 (42%)
 Frame = +3

Query: 165 EFTENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLRVKLP 344
           E   NQ+V+   R      C     N ++   D   +EYL  D  + E +        L 
Sbjct: 319 ELALNQDVQKKLREEINTFCP--KNNKELKYDDIKEMEYL--DKVFKETLRMYPPASILM 374

Query: 345 KTPIDKNTFHKFEITVPDELKDYL 416
           +  I   TF+  +IT+P E+K ++
Sbjct: 375 RKAISDYTFNDTKITIPKEMKIWI 398


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -2

Query: 247 LIFAVHHPHASFSLDL 200
           L F   HP A+FSLDL
Sbjct: 134 LFFIYVHPSATFSLDL 149


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 162 TEFTENQEVEVFARSNE 212
           TEF EN  ++ F R+N+
Sbjct: 713 TEFMENGSLDTFLRAND 729


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,877
Number of Sequences: 438
Number of extensions: 3231
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)