Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2353
(487 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 161 2e-40
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 161 2e-40
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 161 2e-40
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 161 2e-40
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 161 2e-40
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 161 2e-40
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 161 2e-40
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 161 2e-40
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 161 2e-40
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 155 1e-38
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 155 2e-38
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 91 4e-19
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 86 1e-17
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 67 7e-12
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 53 1e-07
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 52 2e-07
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 36 0.012
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 36 0.012
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.34
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.34
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.34
Z81575-3|CAB04629.2| 313|Caenorhabditis elegans Hypothetical pr... 29 1.8
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 4.1
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 4.1
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 4.1
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 4.1
U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical pr... 27 7.2
U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z46828-5|CAA86861.3| 596|Caenorhabditis elegans Hypothetical pr... 27 9.5
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 161 bits (391), Expect = 2e-40
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = -1
Query: 487 LSGGTAMYPGIADRMQKEITALAPSAMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 308
LSGGT MYPGIADRMQKEITALAPS MKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 300 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 359
Query: 307 KQEYDESGPSIVHRKCF 257
KQEYDESGPSIVHRKCF
Sbjct: 360 KQEYDESGPSIVHRKCF 376
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 161 bits (391), Expect = 2e-40
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = -1
Query: 487 LSGGTAMYPGIADRMQKEITALAPSAMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 308
LSGGT MYPGIADRMQKEITALAPS MKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 300 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 359
Query: 307 KQEYDESGPSIVHRKCF 257
KQEYDESGPSIVHRKCF
Sbjct: 360 KQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 161 bits (391), Expect = 2e-40
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = -1
Query: 487 LSGGTAMYPGIADRMQKEITALAPSAMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 308
LSGGT MYPGIADRMQKEITALAPS MKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 300 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 359
Query: 307 KQEYDESGPSIVHRKCF 257
KQEYDESGPSIVHRKCF
Sbjct: 360 KQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 161 bits (391), Expect = 2e-40
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = -1
Query: 487 LSGGTAMYPGIADRMQKEITALAPSAMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 308
LSGGT MYPGIADRMQKEITALAPS MKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 300 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 359
Query: 307 KQEYDESGPSIVHRKCF 257
KQEYDESGPSIVHRKCF
Sbjct: 360 KQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 161 bits (391), Expect = 2e-40
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = -1
Query: 487 LSGGTAMYPGIADRMQKEITALAPSAMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 308
LSGGT MYPGIADRMQKEITALAPS MKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 300 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 359
Query: 307 KQEYDESGPSIVHRKCF 257
KQEYDESGPSIVHRKCF
Sbjct: 360 KQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 161 bits (391), Expect = 2e-40
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = -1
Query: 487 LSGGTAMYPGIADRMQKEITALAPSAMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 308
LSGGT MYPGIADRMQKEITALAPS MKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 300 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 359
Query: 307 KQEYDESGPSIVHRKCF 257
KQEYDESGPSIVHRKCF
Sbjct: 360 KQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 161 bits (391), Expect = 2e-40
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = -1
Query: 487 LSGGTAMYPGIADRMQKEITALAPSAMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 308
LSGGT MYPGIADRMQKEITALAPS MKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 256 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 315
Query: 307 KQEYDESGPSIVHRKCF 257
KQEYDESGPSIVHRKCF
Sbjct: 316 KQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 161 bits (391), Expect = 2e-40
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = -1
Query: 487 LSGGTAMYPGIADRMQKEITALAPSAMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 308
LSGGT MYPGIADRMQKEITALAPS MKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 286 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 345
Query: 307 KQEYDESGPSIVHRKCF 257
KQEYDESGPSIVHRKCF
Sbjct: 346 KQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 161 bits (391), Expect = 2e-40
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = -1
Query: 487 LSGGTAMYPGIADRMQKEITALAPSAMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 308
LSGGT MYPGIADRMQKEITALAPS MKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 300 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 359
Query: 307 KQEYDESGPSIVHRKCF 257
KQEYDESGPSIVHRKCF
Sbjct: 360 KQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 155 bits (377), Expect = 1e-38
Identities = 74/77 (96%), Positives = 75/77 (97%)
Frame = -1
Query: 487 LSGGTAMYPGIADRMQKEITALAPSAMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 308
LSGGT MYPGIADRMQKEITALAP+ MKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 300 LSGGTTMYPGIADRMQKEITALAPT-MKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 358
Query: 307 KQEYDESGPSIVHRKCF 257
KQEYDESGPSIVHRKCF
Sbjct: 359 KQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 155 bits (376), Expect = 2e-38
Identities = 72/77 (93%), Positives = 74/77 (96%)
Frame = -1
Query: 487 LSGGTAMYPGIADRMQKEITALAPSAMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 308
LSGGT+M+PGIADRMQKEI LAPS MKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 299 LSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 358
Query: 307 KQEYDESGPSIVHRKCF 257
KQEYDESGPSIVHRKCF
Sbjct: 359 KQEYDESGPSIVHRKCF 375
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 91.1 bits (216), Expect = 4e-19
Identities = 40/79 (50%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Frame = -1
Query: 487 LSGGTAMYPGIADRMQKEITALAPSAMKIKIIAPP---ERKYSVWIGGSILASLSTFQQM 317
++GG ++ G +R+ + P +K+++ A P ERKY WIGGSIL SL TFQQM
Sbjct: 357 VTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQM 416
Query: 316 WISKQEYDESGPSIVHRKC 260
W+SK EYDESG SIV +KC
Sbjct: 417 WVSKAEYDESGKSIVEKKC 435
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 85.8 bits (203), Expect = 1e-17
Identities = 37/77 (48%), Positives = 54/77 (70%)
Frame = -1
Query: 487 LSGGTAMYPGIADRMQKEITALAPSAMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 308
LSGGT ++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+
Sbjct: 298 LSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLG 357
Query: 307 KQEYDESGPSIVHRKCF 257
K+EY++ G S +H++ F
Sbjct: 358 KKEYEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 66.9 bits (156), Expect = 7e-12
Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 13/81 (16%)
Frame = -1
Query: 487 LSGGTAMYPGIADRMQKEITAL-----------APSAMKIKIIAPPERKYSVWIGGSILA 341
LSGGT MYPG+ R++KE+ L A KI+I APP RK+ V++GG++LA
Sbjct: 303 LSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLA 362
Query: 340 SL--STFQQMWISKQEYDESG 284
+L Q W+SK+EY+E G
Sbjct: 363 NLMKDRDQDFWVSKKEYEEGG 383
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 52.8 bits (121), Expect = 1e-07
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 16/87 (18%)
Frame = -1
Query: 487 LSGGTAMYPGIADRMQKEITALA----------------PSAMKIKIIAPPERKYSVWIG 356
LSGG+ M+ A ++Q+++ L+ P + +++I+ ++Y+VW G
Sbjct: 328 LSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFG 387
Query: 355 GSILASLSTFQQMWISKQEYDESGPSI 275
GS+LAS S F Q+ +K EY E GPSI
Sbjct: 388 GSMLASTSEFYQVSHTKAEYMERGPSI 414
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/63 (33%), Positives = 42/63 (66%)
Frame = -1
Query: 487 LSGGTAMYPGIADRMQKEITALAPSAMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 308
L+GG ++ PGIA+++++E++ + P+ + ++ P R + ++G I+AS STF+ IS
Sbjct: 477 LAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCIS 536
Query: 307 KQE 299
Q+
Sbjct: 537 LQQ 539
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 36.3 bits (80), Expect = 0.012
Identities = 20/80 (25%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = -1
Query: 481 GGTAMYPGIADRMQKEITALAPSAMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWI 311
GG++ +PG +R+++E+ ++ P+ + + + P+ W G L L+ + WI
Sbjct: 316 GGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWI 371
Query: 310 SKQEYDESGPSIVHRKCF*T 251
+++++DE G S+ F T
Sbjct: 372 NRKDWDERGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 36.3 bits (80), Expect = 0.012
Identities = 20/80 (25%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = -1
Query: 481 GGTAMYPGIADRMQKEITALAPSAMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWI 311
GG++ +PG +R+++E+ ++ P+ + + + P+ W G L L+ + WI
Sbjct: 316 GGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWI 371
Query: 310 SKQEYDESGPSIVHRKCF*T 251
+++++DE G S+ F T
Sbjct: 372 NRKDWDERGDSLEFSNFFQT 391
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.34
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 362 PYGVLPLWRSNDLNLHCRWGESCD 433
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.34
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 362 PYGVLPLWRSNDLNLHCRWGESCD 433
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.34
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 362 PYGVLPLWRSNDLNLHCRWGESCD 433
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z81575-3|CAB04629.2| 313|Caenorhabditis elegans Hypothetical
protein R08H2.3 protein.
Length = 313
Score = 29.1 bits (62), Expect = 1.8
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +3
Query: 261 HFLCTMEGPDSSYSCFEIHICWKVEREARIDPPIHTEYFLSGGAMILIFIADGARAVISF 440
HFL +E P ++ F I IC E+ + + +F+ GA++ IF++ V++F
Sbjct: 20 HFLTAIEIPLHTFGAFMI-ICKTPEKMRHVKWILLLLHFV--GALLDIFLSCLTTPVVNF 76
Query: 441 CIRSAIPGYMAVP 479
+ S P +AVP
Sbjct: 77 PMISGYPLGLAVP 89
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 28.3 bits (60), Expect = 3.1
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Frame = -1
Query: 487 LSGGTAMYPGIADRMQKEITAL-----APSAMKIKIIAPPERK----YSVWIGGSILASL 335
L+GG + PG+ R+++EI + + A+ +K E K + W+G S+L SL
Sbjct: 215 LTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIKNTPLFVSWLGASLLGSL 274
Query: 334 -STFQQMWISKQEY 296
T ++ ++ +E+
Sbjct: 275 RETIERKSLTLEEW 288
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 198 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 290
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 4.1
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 301 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 200
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 198 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 290
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 4.1
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -1
Query: 382 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 221
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
>U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical
protein T25F10.6a protein.
Length = 406
Score = 27.1 bits (57), Expect = 7.2
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = -1
Query: 454 ADRMQKEITALAPSAMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE-YDESGPS 278
A+ + E A AP+A + APP S G + + Q + KQ+ Y PS
Sbjct: 29 AEEPEAEEEAPAPAAASPRAAAPPASLKSPTPGRQQVNFTPSIPQSVLRKQQNYSSGKPS 88
Query: 277 IVHRK 263
+H K
Sbjct: 89 TIHTK 93
>U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical
protein T25F10.6b protein.
Length = 301
Score = 27.1 bits (57), Expect = 7.2
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = -1
Query: 454 ADRMQKEITALAPSAMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE-YDESGPS 278
A+ + E A AP+A + APP S G + + Q + KQ+ Y PS
Sbjct: 29 AEEPEAEEEAPAPAAASPRAAAPPASLKSPTPGRQQVNFTPSIPQSVLRKQQNYSSGKPS 88
Query: 277 IVHRK 263
+H K
Sbjct: 89 TIHTK 93
>Z46828-5|CAA86861.3| 596|Caenorhabditis elegans Hypothetical
protein R03D7.8 protein.
Length = 596
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 362 PYGVLPLWRSNDLNLHCRWGESCDF 436
PYG LP W + +NL G DF
Sbjct: 551 PYGYLPCWNNRLINLWSAPGYGSDF 575
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,801,717
Number of Sequences: 27780
Number of extensions: 207928
Number of successful extensions: 594
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 589
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -