Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2353
(487 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB023025-1|BAA74592.1| 133|Apis mellifera actin protein. 122 3e-30
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 5.3
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 5.3
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 5.3
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 5.3
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 5.3
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 5.3
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 5.3
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 5.3
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 21 7.0
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 7.0
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 9.2
>AB023025-1|BAA74592.1| 133|Apis mellifera actin protein.
Length = 133
Score = 122 bits (293), Expect = 3e-30
Identities = 57/60 (95%), Positives = 58/60 (96%)
Frame = -1
Query: 487 LSGGTAMYPGIADRMQKEITALAPSAMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 308
LSGGT MYPGIADRMQKEITALAPS MKIKIIAPPE+KYSVWIGGSILASLSTFQQMWIS
Sbjct: 74 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPEKKYSVWIGGSILASLSTFQQMWIS 133
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 5.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +3
Query: 18 SSLIRFSTYNHHS*DYKKILWRVQY 92
SSL YN+++ +YK + + + Y
Sbjct: 83 SSLSNNYNYNNYNNNYKPLYYNINY 107
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 5.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +3
Query: 18 SSLIRFSTYNHHS*DYKKILWRVQY 92
SSL YN+++ +YK + + + Y
Sbjct: 83 SSLSNNYNYNNYNNNYKPLYYNINY 107
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 5.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +3
Query: 18 SSLIRFSTYNHHS*DYKKILWRVQY 92
SSL YN+++ +YK + + + Y
Sbjct: 83 SSLSNNYNYNNYNNNYKPLYYNINY 107
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 5.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +3
Query: 18 SSLIRFSTYNHHS*DYKKILWRVQY 92
SSL YN+++ +YK + + + Y
Sbjct: 83 SSLSNNYNYNNYNNNYKPLYYNINY 107
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 5.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +3
Query: 18 SSLIRFSTYNHHS*DYKKILWRVQY 92
SSL YN+++ +YK + + + Y
Sbjct: 316 SSLSNNYNYNNYNNNYKPLYYNINY 340
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 5.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +3
Query: 18 SSLIRFSTYNHHS*DYKKILWRVQY 92
SSL YN+++ +YK + + + Y
Sbjct: 316 SSLSNNYNYNNYNNNYKPLYYNINY 340
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 5.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +3
Query: 18 SSLIRFSTYNHHS*DYKKILWRVQY 92
SSL YN+++ +YK + + + Y
Sbjct: 316 SSLSNNYNYNNYNNNYKPLYYNINY 340
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 5.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +3
Query: 18 SSLIRFSTYNHHS*DYKKILWRVQY 92
SSL YN+++ +YK + + + Y
Sbjct: 305 SSLSNNYNYNNYNNNYKPLYYNINY 329
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 21.0 bits (42), Expect = 7.0
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -1
Query: 328 FQQMWISKQEYDESGPSIVHRK 263
F+Q W S Q Y + +V R+
Sbjct: 151 FRQNWASLQPYKKLSVEVVRRE 172
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 7.0
Identities = 7/27 (25%), Positives = 15/27 (55%)
Frame = +3
Query: 336 REARIDPPIHTEYFLSGGAMILIFIAD 416
R ++ + ++YF GG + I ++D
Sbjct: 967 RRLNVNETVCSDYFSQGGVIESIMVSD 993
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 9.2
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +3
Query: 18 SSLIRFSTYNHHS*DYKKILWRVQY 92
SSL YN+++ +YK + + + Y
Sbjct: 316 SSLSNNYNYNNYNNNYKPLHYNINY 340
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,530
Number of Sequences: 438
Number of extensions: 2581
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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